RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 AMHP03971 560 aa12.32□□□□□ -0.44
CPSF7-212ENST00000489728 DARSP14868 501 aaKnown RBP12.32□□□□□ -0.44
CPSF7-212ENST00000489728 CYP11B2P19099 503 aa12.32□□□□□ -0.44
CPSF7-212ENST00000489728 EIF4BP23588 611 aaKnown RBP12.32□□□□□ -0.44
CPSF7-212ENST00000489728 DDIT3P35638 169 aa12.32□□□□□ -0.44
CPSF7-212ENST00000489728 ANP32AP39687 249 aaKnown RBP12.32□□□□□ -0.44
CPSF7-212ENST00000489728 TXLNAP40222 546 aa12.32□□□□□ -0.44
CPSF7-212ENST00000489728 WDR5P61964 334 aaKnown RBP12.32□□□□□ -0.44
CPSF7-212ENST00000489728 TMEM62Q0P6H9 643 aa12.32□□□□□ -0.44
CPSF7-212ENST00000489728 PKP1Q13835 747 aa12.32□□□□□ -0.44
CPSF7-212ENST00000489728 TFDP1Q14186 410 aa12.32□□□□□ -0.44
CPSF7-212ENST00000489728 STK38Q15208 465 aa12.32□□□□□ -0.44
CPSF7-212ENST00000489728 KIZQ2M2Z5 673 aa12.32□□□□□ -0.44
CPSF7-212ENST00000489728 TMEM119Q4V9L6 283 aa12.32□□□□□ -0.44
CPSF7-212ENST00000489728 CABP7Q86V35 215 aa12.32□□□□□ -0.44
CPSF7-212ENST00000489728 ZNF579Q8NAF0 562 aaKnown RBP12.32□□□□□ -0.44
CPSF7-212ENST00000489728 NLRP7Q8WX94 980 aa12.32□□□□□ -0.44
CPSF7-212ENST00000489728 SCLT1Q96NL6 688 aa12.32□□□□□ -0.44
CPSF7-212ENST00000489728 SH2D3AQ9BRG2 576 aa12.32□□□□□ -0.44
CPSF7-212ENST00000489728 NFKBIZQ9BYH8 718 aa12.32□□□□□ -0.44
CPSF7-212ENST00000489728 GCOM2Q9BZD3 368 aaPredicted RBP12.32□□□□□ -0.44
CPSF7-212ENST00000489728 XPNPEP1Q9NQW7 623 aa12.32□□□□□ -0.44
CPSF7-212ENST00000489728 CXXC1Q9P0U4 656 aaPredicted RBP12.32□□□□□ -0.44
CPSF7-212ENST00000489728 COL4A3BPQ9Y5P4 624 aa12.32□□□□□ -0.44
CPSF7-212ENST00000489728 ZBBXA8MT70 800 aa12.31□□□□□ -0.44
CPSF7-212ENST00000489728 USO1O60763 962 aaKnown RBP12.31□□□□□ -0.44
CPSF7-212ENST00000489728 RPS6KA5O75582 802 aa12.31□□□□□ -0.44
CPSF7-212ENST00000489728 ATP2A2P16615 1042 aaKnown RBP12.31□□□□□ -0.44
CPSF7-212ENST00000489728 SFPQP23246 707 aaKnown RBP eCLIP12.31□□□□□ -0.44
CPSF7-212ENST00000489728 MARCKSP29966 332 aaPredicted RBP12.31□□□□□ -0.44
CPSF7-212ENST00000489728 LAMTOR4Q0VGL1 99 aa12.31□□□□□ -0.44
CPSF7-212ENST00000489728 GRB10Q13322 594 aa12.31□□□□□ -0.44
CPSF7-212ENST00000489728 DRP2Q13474 957 aa12.31□□□□□ -0.44
CPSF7-212ENST00000489728 RAB30Q15771 203 aa12.31□□□□□ -0.44
CPSF7-212ENST00000489728 ECM1Q16610 540 aa12.31□□□□□ -0.44
CPSF7-212ENST00000489728 PADI6Q6TGC4 694 aa12.31□□□□□ -0.44
CPSF7-212ENST00000489728 SRGAP1Q7Z6B7 1085 aa12.31□□□□□ -0.44
CPSF7-212ENST00000489728 IFNLR1Q8IU57 520 aaPredicted RBP12.31□□□□□ -0.44
CPSF7-212ENST00000489728 RHPN2Q8IUC4 686 aa12.31□□□□□ -0.44
CPSF7-212ENST00000489728 TMEM40Q8WWA1 233 aa12.31□□□□□ -0.44
CPSF7-212ENST00000489728 PRPF31Q8WWY3 499 aaKnown RBP12.31□□□□□ -0.44
CPSF7-212ENST00000489728 KIFAP3Q92845 792 aa12.31□□□□□ -0.44
CPSF7-212ENST00000489728 OSMRQ99650 979 aa12.31□□□□□ -0.44
CPSF7-212ENST00000489728 CSRNP2Q9H175 543 aa12.31□□□□□ -0.44
CPSF7-212ENST00000489728 BHMT2Q9H2M3 363 aa12.31□□□□□ -0.44
CPSF7-212ENST00000489728 AGO3Q9H9G7 860 aaKnown RBP12.31□□□□□ -0.44
CPSF7-212ENST00000489728 ERVK-5Q9HDB9 667 aa12.31□□□□□ -0.44
CPSF7-212ENST00000489728 STK17AQ9UEE5 414 aa12.31□□□□□ -0.44
CPSF7-212ENST00000489728 PADI3Q9ULW8 664 aa12.31□□□□□ -0.44
CPSF7-212ENST00000489728 CUTAO60888 179 aa12.3□□□□□ -0.44
CPSF7-212ENST00000489728 GUCY2CP25092 1073 aa12.3□□□□□ -0.44
CPSF7-212ENST00000489728 CDC25AP30304 524 aa12.3□□□□□ -0.44
CPSF7-212ENST00000489728 CD52P31358 61 aa12.3□□□□□ -0.44
CPSF7-212ENST00000489728 ARL2P36404 184 aa12.3□□□□□ -0.44
CPSF7-212ENST00000489728 PHKA2P46019 1235 aa12.3□□□□□ -0.44
CPSF7-212ENST00000489728 KRT85P78386 507 aa12.3□□□□□ -0.44
CPSF7-212ENST00000489728 CEBPZQ03701 1054 aaKnown RBP12.3□□□□□ -0.44
CPSF7-212ENST00000489728 PPP2R5AQ15172 486 aa12.3□□□□□ -0.44
CPSF7-212ENST00000489728 FAM109BQ6ICB4 259 aaPredicted RBP12.3□□□□□ -0.44
CPSF7-212ENST00000489728 FAM228AQ86W67 206 aa12.3□□□□□ -0.44
CPSF7-212ENST00000489728 SYT2Q8N9I0 419 aaPredicted RBP12.3□□□□□ -0.44
CPSF7-212ENST00000489728 TMEM143Q96AN5 459 aa12.3□□□□□ -0.44
CPSF7-212ENST00000489728 PNMA5Q96PV4 448 aa12.3□□□□□ -0.44
CPSF7-212ENST00000489728 TSPYL2Q9H2G4 693 aaPredicted RBP12.3□□□□□ -0.44
CPSF7-212ENST00000489728 C17orf75Q9HAS0 396 aa12.3□□□□□ -0.44
CPSF7-212ENST00000489728 CDHR5Q9HBB8 845 aa12.3□□□□□ -0.44
CPSF7-212ENST00000489728 CHST12Q9NRB3 414 aa12.3□□□□□ -0.44
CPSF7-212ENST00000489728 C1orf112Q9NSG2 853 aa12.3□□□□□ -0.44
CPSF7-212ENST00000489728 CCDC39Q9UFE4 941 aa12.3□□□□□ -0.44
CPSF7-212ENST00000489728 CIZ1Q9ULV3 898 aaPredicted RBP12.3□□□□□ -0.44
CPSF7-212ENST00000489728 GINS2Q9Y248 185 aa12.3□□□□□ -0.44
CPSF7-212ENST00000489728 ZDHHC9Q9Y397 364 aa12.3□□□□□ -0.44
CPSF7-212ENST00000489728 NOC2LQ9Y3T9 749 aaKnown RBP12.3□□□□□ -0.44
CPSF7-212ENST00000489728 PCDHA11Q9Y5I1 949 aa12.3□□□□□ -0.44
CPSF7-212ENST00000489728 PHLPP2Q6ZVD8 1323 aa12.3□□□□□ -0.44
CPSF7-212ENST00000489728 LAMA2P24043 3122 aaKnown RBP12.3□□□□□ -0.44
CPSF7-212ENST00000489728 A0A087WZ62 844 aa12.29□□□□□ -0.44
CPSF7-212ENST00000489728 NAMPTP43490 491 aa12.29□□□□□ -0.44
CPSF7-212ENST00000489728 FXR1P51114 621 aaKnown RBP eCLIP12.29□□□□□ -0.44
CPSF7-212ENST00000489728 GRIN1Q05586 938 aa12.29□□□□□ -0.44
CPSF7-212ENST00000489728 TCTN1Q2MV58 587 aa12.29□□□□□ -0.44
CPSF7-212ENST00000489728 FOXD4L5Q5VV16 416 aaPredicted RBP12.29□□□□□ -0.44
CPSF7-212ENST00000489728 HERC6Q8IVU3 1022 aa12.29□□□□□ -0.44
CPSF7-212ENST00000489728 RASSF8Q8NHQ8 419 aa12.29□□□□□ -0.44
CPSF7-212ENST00000489728 FOXD4L4Q8WXT5 416 aaPredicted RBP12.29□□□□□ -0.44
CPSF7-212ENST00000489728 RSPH1Q8WYR4 309 aa12.29□□□□□ -0.44
CPSF7-212ENST00000489728 SYMPKQ92797 1274 aaKnown RBP12.29□□□□□ -0.44
CPSF7-212ENST00000489728 DRC1Q96MC2 740 aa12.29□□□□□ -0.44
CPSF7-212ENST00000489728 NLRP4Q96MN2 994 aa12.29□□□□□ -0.44
CPSF7-212ENST00000489728 FDXACB1Q9BRP7 624 aaPredicted RBP12.29□□□□□ -0.44
CPSF7-212ENST00000489728 TRAIPQ9BWF2 469 aa12.29□□□□□ -0.44
CPSF7-212ENST00000489728 OSBPL7Q9BZF2 842 aa12.29□□□□□ -0.44
CPSF7-212ENST00000489728 SCAND2PQ9GZW5 306 aaPredicted RBP12.29□□□□□ -0.44
CPSF7-212ENST00000489728 POLR3FQ9H1D9 316 aaPredicted RBP12.29□□□□□ -0.44
CPSF7-212ENST00000489728 C2orf40Q9H1Z8 148 aa12.29□□□□□ -0.44
CPSF7-212ENST00000489728 IFT122Q9HBG6 1241 aa12.29□□□□□ -0.44
CPSF7-212ENST00000489728 TFIP11Q9UBB9 837 aaKnown RBP12.29□□□□□ -0.44
CPSF7-212ENST00000489728 KCNG1Q9UIX4 513 aa12.29□□□□□ -0.44
CPSF7-212ENST00000489728 RCOR1Q9UKL0 485 aa12.29□□□□□ -0.44
CPSF7-212ENST00000489728 ST3GAL5Q9UNP4 418 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms