RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 GPNMBQ14956 572 aa6.41□□□□□ -1.38
PTPN4-210ENST00000485247 TCTN1Q2MV58 587 aa6.41□□□□□ -1.38
PTPN4-210ENST00000485247 EPC2Q52LR7 807 aa6.41□□□□□ -1.38
PTPN4-210ENST00000485247 CNKSR3Q6P9H4 555 aa6.41□□□□□ -1.38
PTPN4-210ENST00000485247 FRMD5Q7Z6J6 570 aa6.41□□□□□ -1.38
PTPN4-210ENST00000485247 FBXO16Q8IX29 292 aaPredicted RBP6.41□□□□□ -1.38
PTPN4-210ENST00000485247 GALNT12Q8IXK2 581 aa6.41□□□□□ -1.38
PTPN4-210ENST00000485247 ASAP3Q8TDY4 903 aa6.41□□□□□ -1.38
PTPN4-210ENST00000485247 ASIC4Q96FT7 647 aa6.41□□□□□ -1.38
PTPN4-210ENST00000485247 NUP88Q99567 741 aaPredicted RBP6.41□□□□□ -1.38
PTPN4-210ENST00000485247 SLF1Q9BQI6 1058 aa6.41□□□□□ -1.38
PTPN4-210ENST00000485247 PRKRIP1Q9H875 184 aaPredicted RBP6.41□□□□□ -1.38
PTPN4-210ENST00000485247 RAVER2Q9HCJ3 691 aaKnown RBP6.41□□□□□ -1.38
PTPN4-210ENST00000485247 HOMER2Q9NSB8 354 aa6.41□□□□□ -1.38
PTPN4-210ENST00000485247 MCM9Q9NXL9 1143 aa6.41□□□□□ -1.38
PTPN4-210ENST00000485247 INSL6Q9Y581 213 aa6.41□□□□□ -1.38
PTPN4-210ENST00000485247 PTPRCP08575 1304 aa6.41□□□□□ -1.38
PTPN4-210ENST00000485247 ABHD14A-ACY1A0A1B0GW23 586 aa6.4□□□□□ -1.38
PTPN4-210ENST00000485247 A0A1W2PP55 124 aa6.4□□□□□ -1.38
PTPN4-210ENST00000485247 SCO2A0A1W2PP80 73 aa6.4□□□□□ -1.38
PTPN4-210ENST00000485247 ASB14A6NK59 587 aa6.4□□□□□ -1.38
PTPN4-210ENST00000485247 E9PSI1 815 aa6.4□□□□□ -1.38
PTPN4-210ENST00000485247 H3BNC9 293 aa6.4□□□□□ -1.38
PTPN4-210ENST00000485247 GPR182O15218 404 aa6.4□□□□□ -1.38
PTPN4-210ENST00000485247 NCK2O43639 380 aa6.4□□□□□ -1.38
PTPN4-210ENST00000485247 TBX10O75333 385 aa6.4□□□□□ -1.38
PTPN4-210ENST00000485247 CSPG5O95196 566 aa6.4□□□□□ -1.38
PTPN4-210ENST00000485247 PDGFBP01127 241 aaPredicted RBP6.4□□□□□ -1.38
PTPN4-210ENST00000485247 CYP2D6P10635 497 aa6.4□□□□□ -1.38
PTPN4-210ENST00000485247 FSTP19883 344 aa6.4□□□□□ -1.38
PTPN4-210ENST00000485247 GTF2F1P35269 517 aaKnown RBP eCLIP6.4□□□□□ -1.38
PTPN4-210ENST00000485247 C19orf57Q0VDD7 668 aa6.4□□□□□ -1.38
PTPN4-210ENST00000485247 HYAL1Q12794 435 aa6.4□□□□□ -1.38
PTPN4-210ENST00000485247 ORC1Q13415 861 aa6.4□□□□□ -1.38
PTPN4-210ENST00000485247 LRRFIP1Q32MZ4 808 aaKnown RBP6.4□□□□□ -1.38
PTPN4-210ENST00000485247 CCDC158Q5M9N0 1113 aa6.4□□□□□ -1.38
PTPN4-210ENST00000485247 IQSEC1Q6DN90 963 aa6.4□□□□□ -1.38
PTPN4-210ENST00000485247 TAPT1Q6NXT6 567 aa6.4□□□□□ -1.38
PTPN4-210ENST00000485247 CERS3Q8IU89 383 aa6.4□□□□□ -1.38
PTPN4-210ENST00000485247 DYNLL2Q96FJ2 89 aa6.4□□□□□ -1.38
PTPN4-210ENST00000485247 FAM46AQ96IP4 442 aaKnown RBP6.4□□□□□ -1.38
PTPN4-210ENST00000485247 TCF12Q99081 682 aa6.4□□□□□ -1.38
PTPN4-210ENST00000485247 CD207Q9UJ71 328 aa6.4□□□□□ -1.38
PTPN4-210ENST00000485247 Q9Y3F1 56 aa6.4□□□□□ -1.38
PTPN4-210ENST00000485247 CTDP1Q9Y5B0 961 aaPredicted RBP6.4□□□□□ -1.38
PTPN4-210ENST00000485247 EPG5Q9HCE0 2579 aa6.4□□□□□ -1.39
PTPN4-210ENST00000485247 TANC1Q9C0D5 1861 aa6.39□□□□□ -1.39
PTPN4-210ENST00000485247 MYO5AQ9Y4I1 1855 aaKnown RBP6.39□□□□□ -1.39
PTPN4-210ENST00000485247 KMT2BQ9UMN6 2715 aaPredicted RBP6.39□□□□□ -1.39
PTPN4-210ENST00000485247 MYO15AQ9UKN7 3530 aa6.39□□□□□ -1.39
PTPN4-210ENST00000485247 LOC730098B7Z3J9 87 aa6.39□□□□□ -1.39
PTPN4-210ENST00000485247 ATP2A1O14983 1001 aa6.39□□□□□ -1.39
PTPN4-210ENST00000485247 LINC01565O15544 149 aa6.39□□□□□ -1.39
PTPN4-210ENST00000485247 NDUFB5O43674 189 aa6.39□□□□□ -1.39
PTPN4-210ENST00000485247 NBNO60934 754 aa6.39□□□□□ -1.39
PTPN4-210ENST00000485247 ZBED4O75132 1171 aa6.39□□□□□ -1.39
PTPN4-210ENST00000485247 ESRRAP11474 423 aaPredicted RBP6.39□□□□□ -1.39
PTPN4-210ENST00000485247 COL9A2Q14055 689 aaPredicted RBP6.39□□□□□ -1.39
PTPN4-210ENST00000485247 IKBKEQ14164 716 aa6.39□□□□□ -1.39
PTPN4-210ENST00000485247 PTGISQ16647 500 aa6.39□□□□□ -1.39
PTPN4-210ENST00000485247 ARTNQ5T4W7 220 aa6.39□□□□□ -1.39
PTPN4-210ENST00000485247 NFRKBQ6P4R8 1299 aa6.39□□□□□ -1.39
PTPN4-210ENST00000485247 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.39□□□□□ -1.39
PTPN4-210ENST00000485247 LRRC8DQ7L1W4 858 aa6.39□□□□□ -1.39
PTPN4-210ENST00000485247 HOMEZQ8IX15 550 aa6.39□□□□□ -1.39
PTPN4-210ENST00000485247 MYOCDQ8IZQ8 938 aa6.39□□□□□ -1.39
PTPN4-210ENST00000485247 FAM133AQ8N9E0 248 aa6.39□□□□□ -1.39
PTPN4-210ENST00000485247 PRPF38AQ8NAV1 312 aaKnown RBP6.39□□□□□ -1.39
PTPN4-210ENST00000485247 CHST13Q8NET6 341 aa6.39□□□□□ -1.39
PTPN4-210ENST00000485247 RPGRIP1Q96KN7 1286 aa6.39□□□□□ -1.39
PTPN4-210ENST00000485247 DBNDD2Q9BQY9 259 aa6.39□□□□□ -1.39
PTPN4-210ENST00000485247 MTG1Q9BT17 334 aaPredicted RBP6.39□□□□□ -1.39
PTPN4-210ENST00000485247 CEP41Q9BYV8 373 aa6.39□□□□□ -1.39
PTPN4-210ENST00000485247 FBXO40Q9UH90 709 aa6.39□□□□□ -1.39
PTPN4-210ENST00000485247 RAXQ9Y2V3 346 aa6.39□□□□□ -1.39
PTPN4-210ENST00000485247 BAHCC1Q9P281 2608 aa6.38□□□□□ -1.39
PTPN4-210ENST00000485247 IGSF3O75054 1194 aa6.38□□□□□ -1.39
PTPN4-210ENST00000485247 EFCAB14O75071 495 aa6.38□□□□□ -1.39
PTPN4-210ENST00000485247 DLGAP3O95886 979 aa6.38□□□□□ -1.39
PTPN4-210ENST00000485247 CXCL10P02778 98 aa6.38□□□□□ -1.39
PTPN4-210ENST00000485247 GRIA4P48058 902 aa6.38□□□□□ -1.39
PTPN4-210ENST00000485247 PREPP48147 710 aa6.38□□□□□ -1.39
PTPN4-210ENST00000485247 NDUFV1P49821 464 aa6.38□□□□□ -1.39
PTPN4-210ENST00000485247 CPT1AP50416 773 aa6.38□□□□□ -1.39
PTPN4-210ENST00000485247 G3BP1Q13283 466 aaKnown RBP eCLIP6.38□□□□□ -1.39
PTPN4-210ENST00000485247 PUM1Q14671 1186 aaKnown RBP eCLIP6.38□□□□□ -1.39
PTPN4-210ENST00000485247 UVSSAQ2YD98 709 aa6.38□□□□□ -1.39
PTPN4-210ENST00000485247 DUSP28Q4G0W2 176 aa6.38□□□□□ -1.39
PTPN4-210ENST00000485247 CCDC184Q52MB2 194 aa6.38□□□□□ -1.39
PTPN4-210ENST00000485247 MCTP2Q6DN12 878 aa6.38□□□□□ -1.39
PTPN4-210ENST00000485247 CCNJLQ8IV13 435 aa6.38□□□□□ -1.39
PTPN4-210ENST00000485247 TMEM192Q8IY95 271 aa6.38□□□□□ -1.39
PTPN4-210ENST00000485247 KIAA2013Q8IYS2 634 aa6.38□□□□□ -1.39
PTPN4-210ENST00000485247 CAGE1Q8TC20 777 aa6.38□□□□□ -1.39
PTPN4-210ENST00000485247 AFAP1L1Q8TED9 768 aa6.38□□□□□ -1.39
PTPN4-210ENST00000485247 SDR42E1Q8WUS8 393 aa6.38□□□□□ -1.39
PTPN4-210ENST00000485247 SSH1Q8WYL5 1049 aa6.38□□□□□ -1.39
PTPN4-210ENST00000485247 RIPOR3Q96MK2 946 aa6.38□□□□□ -1.39
PTPN4-210ENST00000485247 SAMD11Q96NU1 681 aa6.38□□□□□ -1.39
PTPN4-210ENST00000485247 MEIS3Q99687 375 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms