RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-215ENST00000483021 PLA2G5P39877 138 aa21.94■■□□□ 1.1
R3HDM1-215ENST00000483021 GPC3P51654 580 aa21.94■■□□□ 1.1
R3HDM1-215ENST00000483021 CDC42EP1Q00587 391 aa21.94■■□□□ 1.1
R3HDM1-215ENST00000483021 STK3Q13188 491 aa21.94■■□□□ 1.1
R3HDM1-215ENST00000483021 NONOQ15233 471 aaKnown RBP eCLIP21.94■■□□□ 1.1
R3HDM1-215ENST00000483021 CLUL1Q15846 466 aa21.94■■□□□ 1.1
R3HDM1-215ENST00000483021 XKR3Q5GH77 459 aa21.94■■□□□ 1.1
R3HDM1-215ENST00000483021 KRT25Q7Z3Z0 450 aa21.94■■□□□ 1.1
R3HDM1-215ENST00000483021 MBOAT7Q96N66 472 aa21.94■■□□□ 1.1
R3HDM1-215ENST00000483021 TLR9Q9NR96 1032 aa21.94■■□□□ 1.1
R3HDM1-215ENST00000483021 SEPT9Q9UHD8 586 aaPredicted RBP21.94■■□□□ 1.1
R3HDM1-215ENST00000483021 FAM86C2PA6NEL3 165 aa21.93■■□□□ 1.1
R3HDM1-215ENST00000483021 FGF18O76093 207 aa21.93■■□□□ 1.1
R3HDM1-215ENST00000483021 FGFR1P11362 822 aa21.93■■□□□ 1.1
R3HDM1-215ENST00000483021 DARSP14868 501 aaKnown RBP21.93■■□□□ 1.1
R3HDM1-215ENST00000483021 TARBP2Q15633 366 aaKnown RBP21.93■■□□□ 1.1
R3HDM1-215ENST00000483021 PDE12Q6L8Q7 609 aaKnown RBP21.93■■□□□ 1.1
R3HDM1-215ENST00000483021 B3GNT9Q6UX72 402 aa21.93■■□□□ 1.1
R3HDM1-215ENST00000483021 ADGRD2Q7Z7M1 963 aa21.93■■□□□ 1.1
R3HDM1-215ENST00000483021 THNSL1Q8IYQ7 743 aa21.93■■□□□ 1.1
R3HDM1-215ENST00000483021 ABI1Q8IZP0 508 aa21.93■■□□□ 1.1
R3HDM1-215ENST00000483021 COLGALT1Q8NBJ5 622 aa21.93■■□□□ 1.1
R3HDM1-215ENST00000483021 NIFKQ9BYG3 293 aaKnown RBP21.93■■□□□ 1.1
R3HDM1-215ENST00000483021 TYW1Q9NV66 732 aaKnown RBP21.93■■□□□ 1.1
R3HDM1-215ENST00000483021 STK36Q9NRP7 1315 aa21.92■■□□□ 1.1
R3HDM1-215ENST00000483021 PRR33A8MZF0 331 aa21.92■■□□□ 1.1
R3HDM1-215ENST00000483021 DCXO43602 365 aa21.92■■□□□ 1.1
R3HDM1-215ENST00000483021 NEFLP07196 543 aa21.92■■□□□ 1.1
R3HDM1-215ENST00000483021 XBP1P17861 261 aa21.92■■□□□ 1.1
R3HDM1-215ENST00000483021 NRIP1P48552 1158 aa21.92■■□□□ 1.1
R3HDM1-215ENST00000483021 NPY5RQ15761 445 aa21.92■■□□□ 1.1
R3HDM1-215ENST00000483021 LRRC43Q8N309 656 aa21.92■■□□□ 1.1
R3HDM1-215ENST00000483021 ETNPPLQ8TBG4 499 aa21.92■■□□□ 1.1
R3HDM1-215ENST00000483021 MICAL1Q8TDZ2 1067 aa21.92■■□□□ 1.1
R3HDM1-215ENST00000483021 NLRP7Q8WX94 980 aa21.92■■□□□ 1.1
R3HDM1-215ENST00000483021 GJA10Q969M2 543 aa21.92■■□□□ 1.1
R3HDM1-215ENST00000483021 FAM122AQ96E09 287 aa21.92■■□□□ 1.1
R3HDM1-215ENST00000483021 MSLNLQ96KJ4 702 aa21.92■■□□□ 1.1
R3HDM1-215ENST00000483021 LARP6Q9BRS8 491 aaKnown RBP21.92■■□□□ 1.1
R3HDM1-215ENST00000483021 DDX25Q9UHL0 483 aaKnown RBP21.92■■□□□ 1.1
R3HDM1-215ENST00000483021 TRIOO75962 3097 aa21.92■■□□□ 1.1
R3HDM1-215ENST00000483021 EYA4O95677 639 aa21.91■■□□□ 1.1
R3HDM1-215ENST00000483021 DNM2P50570 870 aa21.91■■□□□ 1.1
R3HDM1-215ENST00000483021 MTERF2Q49AM1 385 aa21.91■■□□□ 1.1
R3HDM1-215ENST00000483021 ECHDC2Q86YB7 292 aa21.91■■□□□ 1.1
R3HDM1-215ENST00000483021 AIFM3Q96NN9 605 aa21.91■■□□□ 1.1
R3HDM1-215ENST00000483021 CDCA3Q99618 268 aaPredicted RBP21.91■■□□□ 1.1
R3HDM1-215ENST00000483021 CWH43Q9H720 699 aa21.91■■□□□ 1.1
R3HDM1-215ENST00000483021 TLE6Q9H808 572 aa21.91■■□□□ 1.1
R3HDM1-215ENST00000483021 DACT1Q9NYF0 836 aa21.91■■□□□ 1.1
R3HDM1-215ENST00000483021 LZTS1Q9Y250 596 aa21.91■■□□□ 1.1
R3HDM1-215ENST00000483021 CCDC194A0A1B0GVG4 234 aa21.9■■□□□ 1.1
R3HDM1-215ENST00000483021 PPM1AP35813 382 aa21.9■■□□□ 1.1
R3HDM1-215ENST00000483021 COASYQ13057 564 aa21.9■■□□□ 1.1
R3HDM1-215ENST00000483021 INF2Q27J81 1249 aa21.9■■□□□ 1.1
R3HDM1-215ENST00000483021 RBM23Q86U06 439 aaKnown RBP21.9■■□□□ 1.1
R3HDM1-215ENST00000483021 SMRP1Q8NCR6 262 aa21.9■■□□□ 1.1
R3HDM1-215ENST00000483021 CASD1Q96PB1 797 aa21.9■■□□□ 1.1
R3HDM1-215ENST00000483021 GCOM2Q9BZD3 368 aaPredicted RBP21.9■■□□□ 1.1
R3HDM1-215ENST00000483021 SLKQ9H2G2 1235 aaPredicted RBP21.9■■□□□ 1.1
R3HDM1-215ENST00000483021 HCSTQ9UBK5 93 aa21.9■■□□□ 1.1
R3HDM1-215ENST00000483021 PUF60Q9UHX1 559 aaKnown RBP21.9■■□□□ 1.1
R3HDM1-215ENST00000483021 A0A0U1RQF3 1178 aa21.89■■□□□ 1.09
R3HDM1-215ENST00000483021 DKC1O60832 514 aaKnown RBP eCLIP21.89■■□□□ 1.091e-20■■■□□ 18.6
R3HDM1-215ENST00000483021 GCFC2P16383 781 aaKnown RBP21.89■■□□□ 1.09
R3HDM1-215ENST00000483021 PLCB3Q01970 1234 aa21.89■■□□□ 1.09
R3HDM1-215ENST00000483021 SCRN1Q12765 414 aa21.89■■□□□ 1.09
R3HDM1-215ENST00000483021 ZNF410Q86VK4 478 aa21.89■■□□□ 1.09
R3HDM1-215ENST00000483021 RSPH1Q8WYR4 309 aa21.89■■□□□ 1.09
R3HDM1-215ENST00000483021 MRPS27Q92552 414 aaKnown RBP21.89■■□□□ 1.09
R3HDM1-215ENST00000483021 ZNF668Q96K58 619 aaPredicted RBP21.89■■□□□ 1.09
R3HDM1-215ENST00000483021 JPH2Q9BR39 696 aaPredicted RBP21.89■■□□□ 1.09
R3HDM1-215ENST00000483021 PHF20Q9BVI0 1012 aa21.89■■□□□ 1.09
R3HDM1-215ENST00000483021 RNF19AQ9NV58 838 aa21.89■■□□□ 1.09
R3HDM1-215ENST00000483021 CLEC1BQ9P126 229 aa21.89■■□□□ 1.09
R3HDM1-215ENST00000483021 IGKV6-21A0A0C4DH24 114 aa21.88■■□□□ 1.09
R3HDM1-215ENST00000483021 GLP2RO95838 553 aa21.88■■□□□ 1.09
R3HDM1-215ENST00000483021 EOMESO95936 686 aa21.88■■□□□ 1.09
R3HDM1-215ENST00000483021 SRGAP2BP0DMP2 458 aa21.88■■□□□ 1.09
R3HDM1-215ENST00000483021 SFPQP23246 707 aaKnown RBP eCLIP21.88■■□□□ 1.09
R3HDM1-215ENST00000483021 PSMC5P62195 406 aa21.88■■□□□ 1.09
R3HDM1-215ENST00000483021 LETM2Q2VYF4 491 aa21.88■■□□□ 1.09
R3HDM1-215ENST00000483021 PPP4R3AQ6IN85 833 aa21.88■■□□□ 1.09
R3HDM1-215ENST00000483021 NEK8Q86SG6 692 aa21.88■■□□□ 1.09
R3HDM1-215ENST00000483021 FAM20AQ96MK3 541 aa21.88■■□□□ 1.09
R3HDM1-215ENST00000483021 ZNF558Q96NG5 402 aa21.88■■□□□ 1.09
R3HDM1-215ENST00000483021 CEP89Q96ST8 783 aa21.88■■□□□ 1.09
R3HDM1-215ENST00000483021 NAP1L4Q99733 375 aaKnown RBP21.88■■□□□ 1.09
R3HDM1-215ENST00000483021 MRPL9Q9BYD2 267 aaKnown RBP21.88■■□□□ 1.09
R3HDM1-215ENST00000483021 INO80BQ9C086 356 aaPredicted RBP21.88■■□□□ 1.09
R3HDM1-215ENST00000483021 CHST12Q9NRB3 414 aa21.88■■□□□ 1.09
R3HDM1-215ENST00000483021 KCNJ14Q9UNX9 436 aa21.88■■□□□ 1.09
R3HDM1-215ENST00000483021 PCDHGC5Q9Y5F6 944 aa21.88■■□□□ 1.09
R3HDM1-215ENST00000483021 FSCN2O14926 492 aa21.87■■□□□ 1.09
R3HDM1-215ENST00000483021 SLC37A4O43826 429 aa21.87■■□□□ 1.09
R3HDM1-215ENST00000483021 MAFO75444 373 aaPredicted RBP21.87■■□□□ 1.09
R3HDM1-215ENST00000483021 STBD1O95210 358 aa21.87■■□□□ 1.09
R3HDM1-215ENST00000483021 ANAPC15P60006 121 aa21.87■■□□□ 1.09
R3HDM1-215ENST00000483021 ERVFC1P60507 584 aa21.87■■□□□ 1.09
R3HDM1-215ENST00000483021 PPP2R5CQ13362 524 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms