RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 NHSQ6T4R5 1651 aa6.96□□□□□ -1.3
UPF3A-205ENST00000479712 WDR33Q9C0J8 1336 aaKnown RBP6.96□□□□□ -1.3
UPF3A-205ENST00000479712 BTAF1O14981 1849 aa6.95□□□□□ -1.3
UPF3A-205ENST00000479712 K7ESF4 209 aa6.95□□□□□ -1.3
UPF3A-205ENST00000479712 SCDO00767 359 aa6.95□□□□□ -1.3
UPF3A-205ENST00000479712 TGM5O43548 720 aa6.95□□□□□ -1.3
UPF3A-205ENST00000479712 FBXO21O94952 628 aa6.95□□□□□ -1.3
UPF3A-205ENST00000479712 SLC9A1P19634 815 aa6.95□□□□□ -1.3
UPF3A-205ENST00000479712 KIR3DS1Q14943 382 aa6.95□□□□□ -1.3
UPF3A-205ENST00000479712 PPP2R5AQ15172 486 aa6.95□□□□□ -1.3
UPF3A-205ENST00000479712 STEAP3Q658P3 488 aa6.95□□□□□ -1.3
UPF3A-205ENST00000479712 BICRALQ6AI39 1079 aa6.95□□□□□ -1.3
UPF3A-205ENST00000479712 SLC23A3Q6PIS1 610 aa6.95□□□□□ -1.3
UPF3A-205ENST00000479712 NLGN4XQ8N0W4 816 aa6.95□□□□□ -1.3
UPF3A-205ENST00000479712 CLRN3Q8NCR9 226 aa6.95□□□□□ -1.3
UPF3A-205ENST00000479712 CHMP4CQ96CF2 233 aa6.95□□□□□ -1.3
UPF3A-205ENST00000479712 AHCYL2Q96HN2 611 aaKnown RBP6.95□□□□□ -1.3
UPF3A-205ENST00000479712 CD244Q9BZW8 370 aa6.95□□□□□ -1.3
UPF3A-205ENST00000479712 AASDHPPTQ9NRN7 309 aa6.95□□□□□ -1.3
UPF3A-205ENST00000479712 TOMM22Q9NS69 142 aa6.95□□□□□ -1.3
UPF3A-205ENST00000479712 ANGEL1Q9UNK9 670 aaKnown RBP6.95□□□□□ -1.3
UPF3A-205ENST00000479712 FAN1Q9Y2M0 1017 aa6.95□□□□□ -1.3
UPF3A-205ENST00000479712 SPEF1Q9Y4P9 236 aa6.95□□□□□ -1.3
UPF3A-205ENST00000479712 NUB1Q9Y5A7 615 aa6.95□□□□□ -1.3
UPF3A-205ENST00000479712 SPO11Q9Y5K1 396 aa6.95□□□□□ -1.3
UPF3A-205ENST00000479712 IQGAP3Q86VI3 1631 aa6.94□□□□□ -1.3
UPF3A-205ENST00000479712 NOTOA8MTQ0 251 aa6.94□□□□□ -1.3
UPF3A-205ENST00000479712 DVL2O14641 736 aa6.94□□□□□ -1.3
UPF3A-205ENST00000479712 MAFKO60675 156 aa6.94□□□□□ -1.3
UPF3A-205ENST00000479712 FUT4P22083 530 aa6.94□□□□□ -1.3
UPF3A-205ENST00000479712 SSTR4P31391 388 aa6.94□□□□□ -1.3
UPF3A-205ENST00000479712 PLA2G5P39877 138 aa6.94□□□□□ -1.3
UPF3A-205ENST00000479712 RAB27AP51159 221 aa6.94□□□□□ -1.3
UPF3A-205ENST00000479712 KIF11P52732 1056 aa6.94□□□□□ -1.3
UPF3A-205ENST00000479712 CYP4F8P98187 520 aa6.94□□□□□ -1.3
UPF3A-205ENST00000479712 ABCB5Q2M3G0 1257 aa6.94□□□□□ -1.3
UPF3A-205ENST00000479712 RGL3Q3MIN7 710 aa6.94□□□□□ -1.3
UPF3A-205ENST00000479712 EMC4Q5J8M3 183 aa6.94□□□□□ -1.3
UPF3A-205ENST00000479712 BROXQ5VW32 411 aa6.94□□□□□ -1.3
UPF3A-205ENST00000479712 CPZQ66K79 652 aa6.94□□□□□ -1.3
UPF3A-205ENST00000479712 DTX1Q86Y01 620 aa6.94□□□□□ -1.3
UPF3A-205ENST00000479712 TSR2Q969E8 191 aaKnown RBP6.94□□□□□ -1.3
UPF3A-205ENST00000479712 ELF4Q99607 663 aaPredicted RBP6.94□□□□□ -1.3
UPF3A-205ENST00000479712 VTA1Q9NP79 307 aa6.94□□□□□ -1.3
UPF3A-205ENST00000479712 ATP23Q9Y6H3 246 aa6.94□□□□□ -1.3
UPF3A-205ENST00000479712 COL6A3P12111 3177 aa6.94□□□□□ -1.3
UPF3A-205ENST00000479712 BRD4O60885 1362 aaPredicted RBP6.94□□□□□ -1.3
UPF3A-205ENST00000479712 SHTN1A0MZ66 631 aa6.93□□□□□ -1.3
UPF3A-205ENST00000479712 CLASP2O75122 1294 aaKnown RBP6.93□□□□□ -1.3
UPF3A-205ENST00000479712 MED26O95402 600 aa6.93□□□□□ -1.3
UPF3A-205ENST00000479712 GLI4P10075 376 aa6.93□□□□□ -1.3
UPF3A-205ENST00000479712 SPINK2P20155 84 aa6.93□□□□□ -1.3
UPF3A-205ENST00000479712 SLC6A11P48066 632 aa6.93□□□□□ -1.3
UPF3A-205ENST00000479712 CD97P48960 835 aa6.93□□□□□ -1.3
UPF3A-205ENST00000479712 ERVK-21P61565 698 aa6.93□□□□□ -1.3
UPF3A-205ENST00000479712 PIN1Q13526 163 aaPredicted RBP6.93□□□□□ -1.3
UPF3A-205ENST00000479712 NR0B2Q15466 257 aa6.93□□□□□ -1.3
UPF3A-205ENST00000479712 TERF2Q15554 542 aa6.93□□□□□ -1.3
UPF3A-205ENST00000479712 CYP4F22Q6NT55 531 aa6.93□□□□□ -1.3
UPF3A-205ENST00000479712 KCTD1Q719H9 257 aa6.93□□□□□ -1.3
UPF3A-205ENST00000479712 DCP2Q8IU60 420 aaKnown RBP6.93□□□□□ -1.3
UPF3A-205ENST00000479712 HOOK2Q96ED9 719 aa6.93□□□□□ -1.3
UPF3A-205ENST00000479712 CCDC136Q96JN2 1154 aa6.93□□□□□ -1.3
UPF3A-205ENST00000479712 PAK6Q9NQU5 681 aaPredicted RBP6.93□□□□□ -1.3
UPF3A-205ENST00000479712 TNKSO95271 1327 aa6.93□□□□□ -1.3
UPF3A-205ENST00000479712 BCL9O00512 1426 aa6.93□□□□□ -1.3
UPF3A-205ENST00000479712 SCO2A0A1W2PP80 73 aa6.92□□□□□ -1.3
UPF3A-205ENST00000479712 E2F8A0AVK6 867 aa6.92□□□□□ -1.3
UPF3A-205ENST00000479712 KIAA1324LA8MWY0 1029 aaPredicted RBP6.92□□□□□ -1.3
UPF3A-205ENST00000479712 HGSO14964 777 aaPredicted RBP6.92□□□□□ -1.3
UPF3A-205ENST00000479712 SLC27A2O14975 620 aa6.92□□□□□ -1.3
UPF3A-205ENST00000479712 AKAP10O43572 662 aa6.92□□□□□ -1.3
UPF3A-205ENST00000479712 TSPAN6O43657 245 aa6.92□□□□□ -1.3
UPF3A-205ENST00000479712 PSPNO60542 156 aa6.92□□□□□ -1.3
UPF3A-205ENST00000479712 EFEMP2O95967 443 aa6.92□□□□□ -1.3
UPF3A-205ENST00000479712 HPXP02790 462 aa6.92□□□□□ -1.3
UPF3A-205ENST00000479712 MYBL2P10244 700 aa6.92□□□□□ -1.3
UPF3A-205ENST00000479712 LSP1P33241 339 aa6.92□□□□□ -1.3
UPF3A-205ENST00000479712 IARSP41252 1262 aaKnown RBP6.92□□□□□ -1.3
UPF3A-205ENST00000479712 ERVFC1P60507 584 aa6.92□□□□□ -1.3
UPF3A-205ENST00000479712 PHC1P78364 1004 aa6.92□□□□□ -1.3
UPF3A-205ENST00000479712 SMAD3P84022 425 aaKnown RBP6.92□□□□□ -1.3
UPF3A-205ENST00000479712 KLF1Q13351 362 aaPredicted RBP6.92□□□□□ -1.3
UPF3A-205ENST00000479712 SMAD2Q15796 467 aaKnown RBP6.92□□□□□ -1.3
UPF3A-205ENST00000479712 PTPN21Q16825 1174 aa6.92□□□□□ -1.3
UPF3A-205ENST00000479712 DEFB115Q30KQ5 88 aa6.92□□□□□ -1.3
UPF3A-205ENST00000479712 WDR75Q8IWA0 830 aaKnown RBP6.92□□□□□ -1.3
UPF3A-205ENST00000479712 CBARPQ8N350 705 aaPredicted RBP6.92□□□□□ -1.3
UPF3A-205ENST00000479712 NETO2Q8NC67 525 aa6.92□□□□□ -1.3
UPF3A-205ENST00000479712 SEC14L1Q92503 715 aa6.92□□□□□ -1.3
UPF3A-205ENST00000479712 FAM122AQ96E09 287 aa6.92□□□□□ -1.3
UPF3A-205ENST00000479712 AP5M1Q9H0R1 490 aa6.92□□□□□ -1.3
UPF3A-205ENST00000479712 SMOC1Q9H4F8 434 aa6.92□□□□□ -1.3
UPF3A-205ENST00000479712 C14orf119Q9NWQ9 140 aa6.92□□□□□ -1.3
UPF3A-205ENST00000479712 ZIM2Q9NZV7 527 aa6.92□□□□□ -1.3
UPF3A-205ENST00000479712 MYOTQ9UBF9 498 aa6.92□□□□□ -1.3
UPF3A-205ENST00000479712 GPR160Q9UJ42 338 aa6.92□□□□□ -1.3
UPF3A-205ENST00000479712 B3GALT1Q9Y5Z6 326 aa6.92□□□□□ -1.3
UPF3A-205ENST00000479712 TRIOBPQ9H2D6 2365 aa6.92□□□□□ -1.3
UPF3A-205ENST00000479712 WASHC2AQ641Q2 1341 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms