RNA–Protein interactions for RNA: ENST00000478085.5

SGSM3-209, Transcript of small G protein signaling modulator 3, human

TSL 2

Gene SGSM3, Length 4,218 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SGSM3-209	ENST00000478085	ABI1	Q8IZP0	508 aa		12.83	□□□□□ -0.36
SGSM3-209	ENST00000478085	OR6J1	Q8NGC5	347 aa		12.83	□□□□□ -0.36
SGSM3-209	ENST00000478085	SCFD2	Q8WU76	684 aa		12.83	□□□□□ -0.36
SGSM3-209	ENST00000478085	RUSC1	Q9BVN2	902 aa		12.83	□□□□□ -0.36
SGSM3-209	ENST00000478085	KBTBD4	Q9NVX7	518 aa		12.83	□□□□□ -0.36
SGSM3-209	ENST00000478085	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	12.83	□□□□□ -0.36
SGSM3-209	ENST00000478085		A0A087X0B3	334 aa		12.82	□□□□□ -0.36
SGSM3-209	ENST00000478085	XPOT	O43592	962 aa	Known RBP	12.82	□□□□□ -0.36
SGSM3-209	ENST00000478085	GFPT1	Q06210	699 aa	Predicted RBP	12.82	□□□□□ -0.36
SGSM3-209	ENST00000478085	TMEM62	Q0P6H9	643 aa		12.82	□□□□□ -0.36
SGSM3-209	ENST00000478085	HDX	Q7Z353	690 aa		12.82	□□□□□ -0.36
SGSM3-209	ENST00000478085	NACA2	Q9H009	215 aa		12.82	□□□□□ -0.36
SGSM3-209	ENST00000478085	PFAS	O15067	1338 aa		12.82	□□□□□ -0.36
SGSM3-209	ENST00000478085		A0A1B0GTH6	734 aa		12.82	□□□□□ -0.36
SGSM3-209	ENST00000478085	ZMYND10	O75800	440 aa		12.82	□□□□□ -0.36
SGSM3-209	ENST00000478085	DRAP1	Q14919	205 aa	Predicted RBP	12.82	□□□□□ -0.36
SGSM3-209	ENST00000478085	KAZN	Q674X7	775 aa		12.82	□□□□□ -0.36
SGSM3-209	ENST00000478085	ZNF746	Q6NUN9	644 aa	Predicted RBP	12.82	□□□□□ -0.36
SGSM3-209	ENST00000478085	KCNV1	Q6PIU1	500 aa		12.82	□□□□□ -0.36
SGSM3-209	ENST00000478085	CDR2L	Q86X02	465 aa	Predicted RBP	12.82	□□□□□ -0.36
SGSM3-209	ENST00000478085	LIMA1	Q9UHB6	759 aa	Known RBP	12.82	□□□□□ -0.36
SGSM3-209	ENST00000478085	ODF2L	Q9ULJ1	636 aa		12.82	□□□□□ -0.36
SGSM3-209	ENST00000478085	FGR	P09769	529 aa		12.82	□□□□□ -0.36
SGSM3-209	ENST00000478085	HERVK_113	P62684	666 aa		12.82	□□□□□ -0.36
SGSM3-209	ENST00000478085	GABPA	Q06546	454 aa		12.82	□□□□□ -0.36
SGSM3-209	ENST00000478085	VGLL4	Q14135	290 aa		12.82	□□□□□ -0.36
SGSM3-209	ENST00000478085	MUM1L1	Q5H9M0	696 aa		12.82	□□□□□ -0.36
SGSM3-209	ENST00000478085	SYT17	Q9BSW7	474 aa		12.82	□□□□□ -0.36
SGSM3-209	ENST00000478085	CEP72	Q9P209	647 aa		12.82	□□□□□ -0.36
SGSM3-209	ENST00000478085	VPS18	Q9P253	973 aa		12.82	□□□□□ -0.36
SGSM3-209	ENST00000478085	SUCLA2	Q9P2R7	463 aa	Predicted RBP	12.82	□□□□□ -0.36
SGSM3-209	ENST00000478085	OPA1	O60313	960 aa		12.81	□□□□□ -0.36
SGSM3-209	ENST00000478085	RNF8	O76064	485 aa		12.81	□□□□□ -0.36
SGSM3-209	ENST00000478085	ACTN1	P12814	892 aa		12.81	□□□□□ -0.36
SGSM3-209	ENST00000478085	DSG3	P32926	999 aa		12.81	□□□□□ -0.36
SGSM3-209	ENST00000478085	CNTN2	Q02246	1040 aa		12.81	□□□□□ -0.36
SGSM3-209	ENST00000478085	RNASEL	Q05823	741 aa	Known RBP	12.81	□□□□□ -0.36
SGSM3-209	ENST00000478085	SEMA3F	Q13275	785 aa		12.81	□□□□□ -0.36
SGSM3-209	ENST00000478085	TAB3	Q8N5C8	712 aa	Predicted RBP	12.81	□□□□□ -0.36
SGSM3-209	ENST00000478085	IRX2	Q9BZI1	471 aa	Predicted RBP	12.81	□□□□□ -0.36
SGSM3-209	ENST00000478085	SPATC1L	Q9H0A9	340 aa		12.81	□□□□□ -0.36
SGSM3-209	ENST00000478085	RBAK	Q9NYW8	714 aa	Predicted RBP	12.81	□□□□□ -0.36
SGSM3-209	ENST00000478085	ASTN2	O75129	1339 aa	Predicted RBP	12.81	□□□□□ -0.36
SGSM3-209	ENST00000478085	IRF6	O14896	467 aa		12.81	□□□□□ -0.36
SGSM3-209	ENST00000478085	CYP2C8	P10632	490 aa		12.81	□□□□□ -0.36
SGSM3-209	ENST00000478085	MAPK4	P31152	587 aa		12.81	□□□□□ -0.36
SGSM3-209	ENST00000478085	NR1I3	Q14994	352 aa		12.81	□□□□□ -0.36
SGSM3-209	ENST00000478085	POLR3C	Q9BUI4	534 aa	Predicted RBP	12.81	□□□□□ -0.36
SGSM3-209	ENST00000478085	ATRN	O75882	1429 aa		12.81	□□□□□ -0.36
SGSM3-209	ENST00000478085	CSPG5	O95196	566 aa		12.81	□□□□□ -0.36
SGSM3-209	ENST00000478085	GUCY2F	P51841	1108 aa		12.81	□□□□□ -0.36
SGSM3-209	ENST00000478085	FUT2	Q10981	343 aa		12.81	□□□□□ -0.36
SGSM3-209	ENST00000478085	ZNF667	Q5HYK9	610 aa		12.81	□□□□□ -0.36
SGSM3-209	ENST00000478085	TMEM270	Q6UE05	265 aa		12.81	□□□□□ -0.36
SGSM3-209	ENST00000478085	HEXIM2	Q96MH2	286 aa	Known RBP	12.81	□□□□□ -0.36
SGSM3-209	ENST00000478085	PURB	Q96QR8	312 aa	Known RBP	12.81	□□□□□ -0.36
SGSM3-209	ENST00000478085	DPH5	Q9H2P9	285 aa		12.81	□□□□□ -0.36
SGSM3-209	ENST00000478085	SMARCAD1	Q9H4L7	1026 aa		12.81	□□□□□ -0.36
SGSM3-209	ENST00000478085	KIAA1586	Q9HCI6	787 aa		12.81	□□□□□ -0.36
SGSM3-209	ENST00000478085	WNT7A	O00755	349 aa		12.8	□□□□□ -0.36
SGSM3-209	ENST00000478085	STAM2	O75886	525 aa		12.8	□□□□□ -0.36
SGSM3-209	ENST00000478085	PLS3	P13797	630 aa		12.8	□□□□□ -0.36
SGSM3-209	ENST00000478085	TCF7	P36402	384 aa	Predicted RBP	12.8	□□□□□ -0.36
SGSM3-209	ENST00000478085	KRT39	Q6A163	491 aa		12.8	□□□□□ -0.36
SGSM3-209	ENST00000478085	PASD1	Q8IV76	773 aa		12.8	□□□□□ -0.36
SGSM3-209	ENST00000478085	CDCA5	Q96FF9	252 aa		12.8	□□□□□ -0.36
SGSM3-209	ENST00000478085	MRPL4	Q9BYD3	311 aa	Known RBP	12.8	□□□□□ -0.36
SGSM3-209	ENST00000478085	HSPBP1	Q9NZL4	362 aa		12.8	□□□□□ -0.36
SGSM3-209	ENST00000478085	TTLL3	Q9Y4R7	772 aa		12.8	□□□□□ -0.36
SGSM3-209	ENST00000478085	PPP2R3B	Q9Y5P8	575 aa		12.8	□□□□□ -0.36
SGSM3-209	ENST00000478085	ZBTB39	O15060	712 aa		12.8	□□□□□ -0.36
SGSM3-209	ENST00000478085	TATDN1	Q6P1N9	297 aa		12.8	□□□□□ -0.36
SGSM3-209	ENST00000478085	SH3BP5L	Q7L8J4	393 aa		12.8	□□□□□ -0.36
SGSM3-209	ENST00000478085	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	12.8	□□□□□ -0.36
SGSM3-209	ENST00000478085	FUCA2	Q9BTY2	467 aa		12.8	□□□□□ -0.36
SGSM3-209	ENST00000478085	PXMP2	Q9NR77	195 aa		12.8	□□□□□ -0.36
SGSM3-209	ENST00000478085	CPA4	Q9UI42	421 aa		12.8	□□□□□ -0.36
SGSM3-209	ENST00000478085	INPP5F	Q9Y2H2	1132 aa		12.8	□□□□□ -0.36
SGSM3-209	ENST00000478085	ADGRG1	Q9Y653	693 aa		12.8	□□□□□ -0.36
SGSM3-209	ENST00000478085		E7EVH7	732 aa		12.8	□□□□□ -0.36
SGSM3-209	ENST00000478085	SLC9A1	P19634	815 aa		12.8	□□□□□ -0.36
SGSM3-209	ENST00000478085	GTF2A2	P52657	109 aa		12.8	□□□□□ -0.36
SGSM3-209	ENST00000478085	MRPS25	P82663	173 aa	Known RBP	12.8	□□□□□ -0.36
SGSM3-209	ENST00000478085	MOXD1	Q6UVY6	613 aa		12.8	□□□□□ -0.36
SGSM3-209	ENST00000478085	GPRASP2	Q96D09	838 aa		12.8	□□□□□ -0.36
SGSM3-209	ENST00000478085	FAM204A	Q9H8W3	233 aa		12.8	□□□□□ -0.36
SGSM3-209	ENST00000478085	PITPNM2	Q9BZ72	1349 aa		12.8	□□□□□ -0.36
SGSM3-209	ENST00000478085	MYO1E	Q12965	1108 aa		12.8	□□□□□ -0.36
SGSM3-209	ENST00000478085	PPFIA1	Q13136	1202 aa		12.8	□□□□□ -0.36
SGSM3-209	ENST00000478085	EMC2	Q15006	297 aa		12.8	□□□□□ -0.36
SGSM3-209	ENST00000478085	XRRA1	Q6P2D8	792 aa		12.8	□□□□□ -0.36
SGSM3-209	ENST00000478085	FRMD5	Q7Z6J6	570 aa		12.8	□□□□□ -0.36
SGSM3-209	ENST00000478085	FBXO16	Q8IX29	292 aa	Predicted RBP	12.8	□□□□□ -0.36
SGSM3-209	ENST00000478085	OR6B3	Q8NGW1	331 aa		12.8	□□□□□ -0.36
SGSM3-209	ENST00000478085	SNX25	Q9H3E2	840 aa		12.8	□□□□□ -0.36
SGSM3-209	ENST00000478085	EFCAB8	A8MWE9	144 aa		12.79	□□□□□ -0.36
SGSM3-209	ENST00000478085	GNAT1	P11488	350 aa		12.79	□□□□□ -0.36
SGSM3-209	ENST00000478085	KLK7	P49862	253 aa		12.79	□□□□□ -0.36
SGSM3-209	ENST00000478085	SURF1	Q15526	300 aa		12.79	□□□□□ -0.36
SGSM3-209	ENST00000478085	MFSD14C	Q5VZR4	134 aa		12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms