RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 PAWRQ96IZ0 340 aaKnown RBP16.8■□□□□ 0.28
MCF2L-224ENST00000475524 GSDMAQ96QA5 445 aa16.8■□□□□ 0.28
MCF2L-224ENST00000475524 MAP7D2Q96T17 732 aa16.8■□□□□ 0.28
MCF2L-224ENST00000475524 LARSQ9P2J5 1176 aaKnown RBP16.8■□□□□ 0.28
MCF2L-224ENST00000475524 PHLPP2Q6ZVD8 1323 aa16.79■□□□□ 0.28
MCF2L-224ENST00000475524 TREHO43280 583 aa16.79■□□□□ 0.28
MCF2L-224ENST00000475524 HIP1RO75146 1068 aa16.79■□□□□ 0.28
MCF2L-224ENST00000475524 CD4P01730 458 aa16.79■□□□□ 0.28
MCF2L-224ENST00000475524 MAPTP10636 758 aaKnown RBP16.79■□□□□ 0.28
MCF2L-224ENST00000475524 CYP2C9P11712 490 aa16.79■□□□□ 0.28
MCF2L-224ENST00000475524 ABCD1P33897 745 aa16.79■□□□□ 0.28
MCF2L-224ENST00000475524 CHMP4BP1P59074 171 aa16.79■□□□□ 0.28
MCF2L-224ENST00000475524 ASIC1P78348 528 aa16.79■□□□□ 0.28
MCF2L-224ENST00000475524 HIC1Q14526 733 aa16.79■□□□□ 0.28
MCF2L-224ENST00000475524 PTGISQ16647 500 aa16.79■□□□□ 0.28
MCF2L-224ENST00000475524 RBM43Q6ZSC3 357 aaKnown RBP16.79■□□□□ 0.28
MCF2L-224ENST00000475524 RSPH3Q86UC2 560 aa16.79■□□□□ 0.28
MCF2L-224ENST00000475524 DIS3LQ8TF46 1054 aaKnown RBP16.79■□□□□ 0.28
MCF2L-224ENST00000475524 SH2D3AQ9BRG2 576 aa16.79■□□□□ 0.28
MCF2L-224ENST00000475524 PARVGQ9HBI0 331 aa16.79■□□□□ 0.28
MCF2L-224ENST00000475524 OLFML3Q9NRN5 406 aa16.79■□□□□ 0.28
MCF2L-224ENST00000475524 RMND1Q9NWS8 449 aa16.79■□□□□ 0.28
MCF2L-224ENST00000475524 CENPFP49454 3210 aa16.79■□□□□ 0.28
MCF2L-224ENST00000475524 H0YCG3 227 aa16.78■□□□□ 0.28
MCF2L-224ENST00000475524 TRAK2O60296 914 aa16.78■□□□□ 0.28
MCF2L-224ENST00000475524 FAM13AO94988 1023 aa16.78■□□□□ 0.28
MCF2L-224ENST00000475524 PLS3P13797 630 aa16.78■□□□□ 0.28
MCF2L-224ENST00000475524 EHHADHQ08426 723 aa16.78■□□□□ 0.28
MCF2L-224ENST00000475524 PSMD2Q13200 908 aa16.78■□□□□ 0.28
MCF2L-224ENST00000475524 CUL4BQ13620 913 aa16.78■□□□□ 0.28
MCF2L-224ENST00000475524 FAM43BQ6ZT52 329 aaPredicted RBP16.78■□□□□ 0.28
MCF2L-224ENST00000475524 ZNF410Q86VK4 478 aa16.78■□□□□ 0.28
MCF2L-224ENST00000475524 KIAA0319LQ8IZA0 1049 aa16.78■□□□□ 0.28
MCF2L-224ENST00000475524 DAW1Q8N136 415 aa16.78■□□□□ 0.28
MCF2L-224ENST00000475524 CCDC155Q8N6L0 562 aa16.78■□□□□ 0.28
MCF2L-224ENST00000475524 METTL13Q8N6R0 699 aa16.78■□□□□ 0.28
MCF2L-224ENST00000475524 SPIRE2Q8WWL2 714 aa16.78■□□□□ 0.28
MCF2L-224ENST00000475524 STAMQ92783 540 aa16.78■□□□□ 0.28
MCF2L-224ENST00000475524 IFT74Q96LB3 600 aa16.78■□□□□ 0.28
MCF2L-224ENST00000475524 CTAGE1Q96RT6 745 aa16.78■□□□□ 0.28
MCF2L-224ENST00000475524 NTPCRQ9BSD7 190 aaKnown RBP16.78■□□□□ 0.28
MCF2L-224ENST00000475524 NFKBIZQ9BYH8 718 aa16.78■□□□□ 0.28
MCF2L-224ENST00000475524 NOD1Q9Y239 953 aa16.78■□□□□ 0.28
MCF2L-224ENST00000475524 SIP14410 1827 aa16.77■□□□□ 0.28
MCF2L-224ENST00000475524 DCDC2CA8MYV0 355 aa16.77■□□□□ 0.28
MCF2L-224ENST00000475524 B4GALT4O60513 344 aa16.77■□□□□ 0.28
MCF2L-224ENST00000475524 RHOBTB3O94955 611 aa16.77■□□□□ 0.28
MCF2L-224ENST00000475524 LETM1O95202 739 aaPredicted RBP16.77■□□□□ 0.28
MCF2L-224ENST00000475524 EN2P19622 333 aaPredicted RBP16.77■□□□□ 0.28
MCF2L-224ENST00000475524 NAMPTP43490 491 aa16.77■□□□□ 0.28
MCF2L-224ENST00000475524 SARSP49591 514 aaKnown RBP16.77■□□□□ 0.28
MCF2L-224ENST00000475524 MKRN4PQ13434 485 aaPredicted RBP16.77■□□□□ 0.28
MCF2L-224ENST00000475524 TFDP1Q14186 410 aa16.77■□□□□ 0.28
MCF2L-224ENST00000475524 FAM102BQ5T8I3 360 aa16.77■□□□□ 0.28
MCF2L-224ENST00000475524 DYMQ7RTS9 669 aa16.77■□□□□ 0.28
MCF2L-224ENST00000475524 IFNLR1Q8IU57 520 aaPredicted RBP16.77■□□□□ 0.28
MCF2L-224ENST00000475524 GRAMD1CQ8IYS0 662 aa16.77■□□□□ 0.28
MCF2L-224ENST00000475524 TNS4Q8IZW8 715 aa16.77■□□□□ 0.28
MCF2L-224ENST00000475524 TRIML1Q8N9V2 468 aa16.77■□□□□ 0.28
MCF2L-224ENST00000475524 CAGE1Q8TC20 777 aa16.77■□□□□ 0.28
MCF2L-224ENST00000475524 SMARCE1Q969G3 411 aa16.77■□□□□ 0.28
MCF2L-224ENST00000475524 POLR3FQ9H1D9 316 aaPredicted RBP16.77■□□□□ 0.28
MCF2L-224ENST00000475524 ST6GALNAC4Q9H4F1 302 aa16.77■□□□□ 0.28
MCF2L-224ENST00000475524 SUGCTQ9HAC7 445 aa16.77■□□□□ 0.28
MCF2L-224ENST00000475524 PANK4Q9NVE7 773 aa16.77■□□□□ 0.28
MCF2L-224ENST00000475524 KIAA1468Q9P260 1216 aa16.77■□□□□ 0.28
MCF2L-224ENST00000475524 SUCLA2Q9P2R7 463 aaPredicted RBP16.77■□□□□ 0.28
MCF2L-224ENST00000475524 TANC1Q9C0D5 1861 aa16.76■□□□□ 0.27
MCF2L-224ENST00000475524 KLRC4O43908 158 aa16.76■□□□□ 0.27
MCF2L-224ENST00000475524 RPN1P04843 607 aaKnown RBP16.76■□□□□ 0.27
MCF2L-224ENST00000475524 PRR29P0C7W0 189 aa16.76■□□□□ 0.27
MCF2L-224ENST00000475524 IDEP14735 1019 aa16.76■□□□□ 0.27
MCF2L-224ENST00000475524 CLCN3P51790 818 aa16.76■□□□□ 0.27
MCF2L-224ENST00000475524 COASYQ13057 564 aa16.76■□□□□ 0.27
MCF2L-224ENST00000475524 DMP1Q13316 513 aaPredicted RBP16.76■□□□□ 0.27
MCF2L-224ENST00000475524 PNOCQ13519 176 aa16.76■□□□□ 0.27
MCF2L-224ENST00000475524 ALCAMQ13740 583 aa16.76■□□□□ 0.27
MCF2L-224ENST00000475524 LRRC71Q8N4P6 559 aa16.76■□□□□ 0.27
MCF2L-224ENST00000475524 TMEM143Q96AN5 459 aa16.76■□□□□ 0.27
MCF2L-224ENST00000475524 BLZF1Q9H2G9 400 aa16.76■□□□□ 0.27
MCF2L-224ENST00000475524 PCDHA5Q9Y5H7 936 aa16.76■□□□□ 0.27
MCF2L-224ENST00000475524 NPHP3-ACAD11A0A0J9YXS1 232 aa16.75■□□□□ 0.27
MCF2L-224ENST00000475524 PITPNM1O00562 1244 aa16.75■□□□□ 0.27
MCF2L-224ENST00000475524 GLRA2P23416 452 aa16.75■□□□□ 0.27
MCF2L-224ENST00000475524 SMTNP53814 917 aa16.75■□□□□ 0.27
MCF2L-224ENST00000475524 ZNF200P98182 395 aaPredicted RBP16.75■□□□□ 0.27
MCF2L-224ENST00000475524 LAMTOR4Q0VGL1 99 aa16.75■□□□□ 0.27
MCF2L-224ENST00000475524 BFSP2Q13515 415 aa16.75■□□□□ 0.27
MCF2L-224ENST00000475524 PCBP1Q15365 356 aaKnown RBP eCLIP16.75■□□□□ 0.27
MCF2L-224ENST00000475524 TRIM71Q2Q1W2 868 aaKnown RBP16.75■□□□□ 0.27
MCF2L-224ENST00000475524 FAM26DQ5JW98 314 aa16.75■□□□□ 0.27
MCF2L-224ENST00000475524 ODR4Q5SWX8 454 aa16.75■□□□□ 0.27
MCF2L-224ENST00000475524 RUFY4Q6ZNE9 571 aa16.75■□□□□ 0.27
MCF2L-224ENST00000475524 PRPF31Q8WWY3 499 aaKnown RBP16.75■□□□□ 0.27
MCF2L-224ENST00000475524 HVCN1Q96D96 273 aa16.75■□□□□ 0.27
MCF2L-224ENST00000475524 C2orf40Q9H1Z8 148 aa16.75■□□□□ 0.27
MCF2L-224ENST00000475524 GPRC5CQ9NQ84 441 aa16.75■□□□□ 0.27
MCF2L-224ENST00000475524 TRMT13Q9NUP7 481 aaKnown RBP16.75■□□□□ 0.27
MCF2L-224ENST00000475524 EXOC1Q9NV70 894 aa16.75■□□□□ 0.27
MCF2L-224ENST00000475524 TMEM63CQ9P1W3 806 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms