RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 LCORLQ8N3X6 602 aa7.78□□□□□ -1.16
HDAC3-206ENST00000471968 DNAJB3Q8WWF6 145 aa7.78□□□□□ -1.16
HDAC3-206ENST00000471968 GAB3Q8WWW8 586 aa7.78□□□□□ -1.16
HDAC3-206ENST00000471968 CLEC4DQ8WXI8 215 aa7.78□□□□□ -1.16
HDAC3-206ENST00000471968 TMEM169Q96HH4 297 aa7.78□□□□□ -1.16
HDAC3-206ENST00000471968 KXD1Q9BQD3 176 aa7.78□□□□□ -1.16
HDAC3-206ENST00000471968 DBNDD2Q9BQY9 259 aa7.78□□□□□ -1.16
HDAC3-206ENST00000471968 TRIM4Q9C037 500 aa7.78□□□□□ -1.16
HDAC3-206ENST00000471968 PIDD1Q9HB75 910 aa7.78□□□□□ -1.16
HDAC3-206ENST00000471968 TCP11L1Q9NUJ3 509 aa7.78□□□□□ -1.16
HDAC3-206ENST00000471968 IL17BQ9UHF5 180 aa7.78□□□□□ -1.16
HDAC3-206ENST00000471968 IRAK3Q9Y616 596 aa7.78□□□□□ -1.16
HDAC3-206ENST00000471968 UTP20O75691 2785 aaKnown RBP7.78□□□□□ -1.16
HDAC3-206ENST00000471968 ZMYM2Q9UBW7 1377 aa7.77□□□□□ -1.17
HDAC3-206ENST00000471968 C2CD2LO14523 706 aa7.77□□□□□ -1.17
HDAC3-206ENST00000471968 MGEA5O60502 916 aa7.77□□□□□ -1.17
HDAC3-206ENST00000471968 CTSAP10619 480 aa7.77□□□□□ -1.17
HDAC3-206ENST00000471968 FAM193AP78312 1265 aa7.77□□□□□ -1.17
HDAC3-206ENST00000471968 MRPS6P82932 125 aaKnown RBP7.77□□□□□ -1.17
HDAC3-206ENST00000471968 CYP4F3Q08477 520 aa7.77□□□□□ -1.17
HDAC3-206ENST00000471968 STXBP2Q15833 593 aa7.77□□□□□ -1.17
HDAC3-206ENST00000471968 TMEM266Q2M3C6 531 aa7.77□□□□□ -1.17
HDAC3-206ENST00000471968 CYP26C1Q6V0L0 522 aa7.77□□□□□ -1.17
HDAC3-206ENST00000471968 MTSS1LQ765P7 747 aa7.77□□□□□ -1.17
HDAC3-206ENST00000471968 LRRC43Q8N309 656 aa7.77□□□□□ -1.17
HDAC3-206ENST00000471968 SPEM1Q8N4L4 309 aa7.77□□□□□ -1.17
HDAC3-206ENST00000471968 MKL1Q969V6 931 aa7.77□□□□□ -1.17
HDAC3-206ENST00000471968 CEP95Q96GE4 821 aa7.77□□□□□ -1.17
HDAC3-206ENST00000471968 ADAMTS10Q9H324 1103 aa7.77□□□□□ -1.17
HDAC3-206ENST00000471968 ANTXR1Q9H6X2 564 aa7.77□□□□□ -1.17
HDAC3-206ENST00000471968 ATP6V0A4Q9HBG4 840 aa7.77□□□□□ -1.17
HDAC3-206ENST00000471968 DKK4Q9UBT3 224 aa7.77□□□□□ -1.17
HDAC3-206ENST00000471968 DNMT3LQ9UJW3 386 aa7.77□□□□□ -1.17
HDAC3-206ENST00000471968 COL5A1P20908 1838 aaPredicted RBP7.77□□□□□ -1.17
HDAC3-206ENST00000471968 F5P12259 2224 aa7.76□□□□□ -1.17
HDAC3-206ENST00000471968 SPAG17Q6Q759 2223 aa7.76□□□□□ -1.17
HDAC3-206ENST00000471968 ASCC3Q8N3C0 2202 aaKnown RBP7.76□□□□□ -1.17
HDAC3-206ENST00000471968 DENND3A2RUS2 1198 aa7.76□□□□□ -1.17
HDAC3-206ENST00000471968 MAN2B1O00754 1011 aa7.76□□□□□ -1.17
HDAC3-206ENST00000471968 KHNYNO15037 678 aaKnown RBP7.76□□□□□ -1.17
HDAC3-206ENST00000471968 GGPS1O95749 300 aa7.76□□□□□ -1.17
HDAC3-206ENST00000471968 RASA1P20936 1047 aa7.76□□□□□ -1.17
HDAC3-206ENST00000471968 MCCP23508 829 aa7.76□□□□□ -1.17
HDAC3-206ENST00000471968 PXNP49023 591 aaPredicted RBP7.76□□□□□ -1.17
HDAC3-206ENST00000471968 TMEM62Q0P6H9 643 aa7.76□□□□□ -1.17
HDAC3-206ENST00000471968 NFX1Q12986 1120 aaKnown RBP7.76□□□□□ -1.17
HDAC3-206ENST00000471968 CELF3Q5SZQ8 465 aaKnown RBP7.76□□□□□ -1.17
HDAC3-206ENST00000471968 SYDE2Q5VT97 1194 aa7.76□□□□□ -1.17
HDAC3-206ENST00000471968 PRICKLE2Q7Z3G6 844 aa7.76□□□□□ -1.17
HDAC3-206ENST00000471968 TRIM50Q86XT4 487 aa7.76□□□□□ -1.17
HDAC3-206ENST00000471968 ZNF707Q96C28 371 aaPredicted RBP7.76□□□□□ -1.17
HDAC3-206ENST00000471968 CASD1Q96PB1 797 aa7.76□□□□□ -1.17
HDAC3-206ENST00000471968 ADAM2Q99965 735 aa7.76□□□□□ -1.17
HDAC3-206ENST00000471968 PHF20Q9BVI0 1012 aa7.76□□□□□ -1.17
HDAC3-206ENST00000471968 EMILIN2Q9BXX0 1053 aa7.76□□□□□ -1.17
HDAC3-206ENST00000471968 SEMA4CQ9C0C4 833 aa7.76□□□□□ -1.17
HDAC3-206ENST00000471968 TMEM117Q9H0C3 514 aa7.76□□□□□ -1.17
HDAC3-206ENST00000471968 ARMT1Q9H993 441 aa7.76□□□□□ -1.17
HDAC3-206ENST00000471968 C2orf42Q9NWW7 574 aa7.76□□□□□ -1.17
HDAC3-206ENST00000471968 ZFP37Q9Y6Q3 630 aaPredicted RBP7.76□□□□□ -1.17
HDAC3-206ENST00000471968 PCNX2A6NKB5 2137 aa7.76□□□□□ -1.17
HDAC3-206ENST00000471968 NF1P21359 2839 aa7.75□□□□□ -1.17
HDAC3-206ENST00000471968 IGKV6D-41A0A0C4DH26 115 aa7.75□□□□□ -1.17
HDAC3-206ENST00000471968 TEX51A0A1B0GUA7 166 aa7.75□□□□□ -1.17
HDAC3-206ENST00000471968 PAPSS2O95340 614 aaPredicted RBP7.75□□□□□ -1.17
HDAC3-206ENST00000471968 TTLL1O95922 423 aa7.75□□□□□ -1.17
HDAC3-206ENST00000471968 CNPP09543 421 aaKnown RBP7.75□□□□□ -1.17
HDAC3-206ENST00000471968 LY6DQ14210 128 aa7.75□□□□□ -1.17
HDAC3-206ENST00000471968 PLK5Q496M5 336 aa7.75□□□□□ -1.17
HDAC3-206ENST00000471968 SLC24A5Q71RS6 500 aa7.75□□□□□ -1.17
HDAC3-206ENST00000471968 TMEM173Q86WV6 379 aaPredicted RBP7.75□□□□□ -1.17
HDAC3-206ENST00000471968 ABI1Q8IZP0 508 aa7.75□□□□□ -1.17
HDAC3-206ENST00000471968 PNPLA1Q8N8W4 532 aa7.75□□□□□ -1.17
HDAC3-206ENST00000471968 GMCL1Q96IK5 515 aa7.75□□□□□ -1.17
HDAC3-206ENST00000471968 ZC3H10Q96K80 434 aaKnown RBP7.75□□□□□ -1.17
HDAC3-206ENST00000471968 RHOBTB2Q9BYZ6 727 aa7.75□□□□□ -1.17
HDAC3-206ENST00000471968 FAM49AQ9H0Q0 323 aaPredicted RBP7.75□□□□□ -1.17
HDAC3-206ENST00000471968 RANBP17Q9H2T7 1088 aaKnown RBP7.75□□□□□ -1.17
HDAC3-206ENST00000471968 MKNK2Q9HBH9 465 aa7.75□□□□□ -1.17
HDAC3-206ENST00000471968 C1orf112Q9NSG2 853 aa7.75□□□□□ -1.17
HDAC3-206ENST00000471968 ATP8A2Q9NTI2 1148 aa7.75□□□□□ -1.17
HDAC3-206ENST00000471968 MTMR4Q9NYA4 1195 aa7.75□□□□□ -1.17
HDAC3-206ENST00000471968 CDH7Q9ULB5 785 aa7.75□□□□□ -1.17
HDAC3-206ENST00000471968 SQORQ9Y6N5 450 aa7.75□□□□□ -1.17
HDAC3-206ENST00000471968 GREB1LQ9C091 1923 aaPredicted RBP7.75□□□□□ -1.17
HDAC3-206ENST00000471968 USP9YO00507 2555 aaPredicted RBP7.75□□□□□ -1.17
HDAC3-206ENST00000471968 CCDC171Q6TFL3 1326 aa7.75□□□□□ -1.17
HDAC3-206ENST00000471968 SALL3Q9BXA9 1300 aa7.75□□□□□ -1.17
HDAC3-206ENST00000471968 ITPR2Q14571 2701 aa7.74□□□□□ -1.17
HDAC3-206ENST00000471968 BCLAF3A2AJT9 711 aaKnown RBP7.74□□□□□ -1.17
HDAC3-206ENST00000471968 PATE3B3GLJ2 98 aa7.74□□□□□ -1.17
HDAC3-206ENST00000471968 C9IYK1 514 aa7.74□□□□□ -1.17
HDAC3-206ENST00000471968 PLA2G6O60733 806 aa7.74□□□□□ -1.17
HDAC3-206ENST00000471968 SSBP05455 408 aaKnown RBP eCLIP7.74□□□□□ -1.17
HDAC3-206ENST00000471968 CHRNB1P11230 501 aa7.74□□□□□ -1.17
HDAC3-206ENST00000471968 FSHRP23945 695 aa7.74□□□□□ -1.17
HDAC3-206ENST00000471968 MAPK8P45983 427 aa7.74□□□□□ -1.17
HDAC3-206ENST00000471968 POLGP54098 1239 aaPredicted RBP7.74□□□□□ -1.17
HDAC3-206ENST00000471968 BCAR1P56945 870 aa7.74□□□□□ -1.17
HDAC3-206ENST00000471968 IER5Q5VY09 327 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms