RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 ARHGEF35A5YM69 484 aa16.62■□□□□ 0.25
CDC42SE1-203ENST00000470278 GRXCR1A8MXD5 290 aa16.62■□□□□ 0.25
CDC42SE1-203ENST00000470278 DNAJB2P25686 324 aa16.62■□□□□ 0.25
CDC42SE1-203ENST00000470278 RFC2P35250 354 aa16.62■□□□□ 0.25
CDC42SE1-203ENST00000470278 PBX2P40425 430 aa16.62■□□□□ 0.25
CDC42SE1-203ENST00000470278 MRPS6P82932 125 aaKnown RBP16.62■□□□□ 0.25
CDC42SE1-203ENST00000470278 MGAT3Q09327 533 aa16.62■□□□□ 0.25
CDC42SE1-203ENST00000470278 MKRN4PQ13434 485 aaPredicted RBP16.62■□□□□ 0.25
CDC42SE1-203ENST00000470278 TMEM240Q5SV17 173 aa16.62■□□□□ 0.25
CDC42SE1-203ENST00000470278 ZNF618Q5T7W0 954 aa16.62■□□□□ 0.25
CDC42SE1-203ENST00000470278 LRRC71Q8N4P6 559 aa16.62■□□□□ 0.25
CDC42SE1-203ENST00000470278 METTL13Q8N6R0 699 aa16.62■□□□□ 0.25
CDC42SE1-203ENST00000470278 MCPH1Q8NEM0 835 aa16.62■□□□□ 0.25
CDC42SE1-203ENST00000470278 TET1Q8NFU7 2136 aa16.62■□□□□ 0.25
CDC42SE1-203ENST00000470278 RASSF8Q8NHQ8 419 aa16.62■□□□□ 0.25
CDC42SE1-203ENST00000470278 DNAJB3Q8WWF6 145 aa16.62■□□□□ 0.25
CDC42SE1-203ENST00000470278 MAP7D2Q96T17 732 aa16.62■□□□□ 0.25
CDC42SE1-203ENST00000470278 MTRQ99707 1265 aa16.62■□□□□ 0.25
CDC42SE1-203ENST00000470278 ATP6V0A4Q9HBG4 840 aa16.62■□□□□ 0.25
CDC42SE1-203ENST00000470278 XPNPEP1Q9NQW7 623 aa16.62■□□□□ 0.25
CDC42SE1-203ENST00000470278 KCND2Q9NZV8 630 aa16.62■□□□□ 0.25
CDC42SE1-203ENST00000470278 XIRP2A4UGR9 3374 aa16.61■□□□□ 0.25
CDC42SE1-203ENST00000470278 E9PMD0 336 aa16.61■□□□□ 0.25
CDC42SE1-203ENST00000470278 IQCF3P0C7M6 154 aa16.61■□□□□ 0.25
CDC42SE1-203ENST00000470278 CYP2C18P33260 490 aa16.61■□□□□ 0.25
CDC42SE1-203ENST00000470278 DNM2P50570 870 aa16.61■□□□□ 0.25
CDC42SE1-203ENST00000470278 CLCN3P51790 818 aa16.61■□□□□ 0.25
CDC42SE1-203ENST00000470278 SLC12A3P55017 1021 aa16.61■□□□□ 0.25
CDC42SE1-203ENST00000470278 ZRSR1Q15695 479 aaKnown RBP16.61■□□□□ 0.25
CDC42SE1-203ENST00000470278 IER5Q5VY09 327 aa16.61■□□□□ 0.25
CDC42SE1-203ENST00000470278 PADI6Q6TGC4 694 aa16.61■□□□□ 0.25
CDC42SE1-203ENST00000470278 CCDC73Q6ZRK6 1079 aa16.61■□□□□ 0.25
CDC42SE1-203ENST00000470278 TMEM199Q8N511 208 aa16.61■□□□□ 0.25
CDC42SE1-203ENST00000470278 SYT2Q8N9I0 419 aaPredicted RBP16.61■□□□□ 0.25
CDC42SE1-203ENST00000470278 LRRC15Q8TF66 581 aa16.61■□□□□ 0.25
CDC42SE1-203ENST00000470278 TCP11Q8WWU5 503 aa16.61■□□□□ 0.25
CDC42SE1-203ENST00000470278 FAM49AQ9H0Q0 323 aaPredicted RBP16.61■□□□□ 0.25
CDC42SE1-203ENST00000470278 BLOC1S4Q9NUP1 217 aa16.61■□□□□ 0.25
CDC42SE1-203ENST00000470278 A0A087WWV3 80 aa16.6■□□□□ 0.25
CDC42SE1-203ENST00000470278 FAM237AA0A1B0GTK4 181 aa16.6■□□□□ 0.25
CDC42SE1-203ENST00000470278 A0A1W2PQ27 194 aa16.6■□□□□ 0.25
CDC42SE1-203ENST00000470278 A0A1W2PQ64 194 aa16.6■□□□□ 0.25
CDC42SE1-203ENST00000470278 A0A1W2PQD8 194 aa16.6■□□□□ 0.25
CDC42SE1-203ENST00000470278 RSPH10B2B2RC85 870 aa16.6■□□□□ 0.25
CDC42SE1-203ENST00000470278 USO1O60763 962 aaKnown RBP16.6■□□□□ 0.25
CDC42SE1-203ENST00000470278 PFKMP08237 780 aa16.6■□□□□ 0.25
CDC42SE1-203ENST00000470278 RSPH10BP0C881 870 aa16.6■□□□□ 0.25
CDC42SE1-203ENST00000470278 CSF2RAP15509 400 aa16.6■□□□□ 0.25
CDC42SE1-203ENST00000470278 CYP11B2P19099 503 aa16.6■□□□□ 0.25
CDC42SE1-203ENST00000470278 CMA1P23946 247 aa16.6■□□□□ 0.25
CDC42SE1-203ENST00000470278 CDC42EP1Q00587 391 aa16.6■□□□□ 0.25
CDC42SE1-203ENST00000470278 DRP2Q13474 957 aa16.6■□□□□ 0.25
CDC42SE1-203ENST00000470278 CSPP1Q1MSJ5 1256 aa16.6■□□□□ 0.25
CDC42SE1-203ENST00000470278 NAALADL2Q58DX5 795 aa16.6■□□□□ 0.25
CDC42SE1-203ENST00000470278 CLEC17AQ6ZS10 378 aa16.6■□□□□ 0.25
CDC42SE1-203ENST00000470278 LARP4BQ92615 738 aaKnown RBP16.6■□□□□ 0.25
CDC42SE1-203ENST00000470278 RAD54LQ92698 747 aa16.6■□□□□ 0.25
CDC42SE1-203ENST00000470278 PYM1Q9BRP8 204 aaKnown RBP16.6■□□□□ 0.25
CDC42SE1-203ENST00000470278 TIPINQ9BVW5 301 aa16.6■□□□□ 0.25
CDC42SE1-203ENST00000470278 SUGCTQ9HAC7 445 aa16.6■□□□□ 0.25
CDC42SE1-203ENST00000470278 GDPD2Q9HCC8 539 aa16.6■□□□□ 0.25
CDC42SE1-203ENST00000470278 FAM13BQ9NYF5 915 aa16.6■□□□□ 0.25
CDC42SE1-203ENST00000470278 SQORQ9Y6N5 450 aa16.6■□□□□ 0.25
CDC42SE1-203ENST00000470278 A0A087X0B3 334 aa16.59■□□□□ 0.25
CDC42SE1-203ENST00000470278 M0QZ92 97 aa16.59■□□□□ 0.25
CDC42SE1-203ENST00000470278 CHRNA1P02708 482 aa16.59■□□□□ 0.25
CDC42SE1-203ENST00000470278 CXCL10P02778 98 aa16.59■□□□□ 0.25
CDC42SE1-203ENST00000470278 CTSHP09668 335 aa16.59■□□□□ 0.25
CDC42SE1-203ENST00000470278 PLA2G4BP0C869 781 aa16.59■□□□□ 0.25
CDC42SE1-203ENST00000470278 FOSL2P15408 326 aa16.59■□□□□ 0.25
CDC42SE1-203ENST00000470278 GUCY2CP25092 1073 aa16.59■□□□□ 0.25
CDC42SE1-203ENST00000470278 MBTPS1Q14703 1052 aa16.59■□□□□ 0.25
CDC42SE1-203ENST00000470278 E2F4Q16254 413 aa16.59■□□□□ 0.25
CDC42SE1-203ENST00000470278 RRAGBQ5VZM2 374 aa16.59■□□□□ 0.25
CDC42SE1-203ENST00000470278 TMEM87AQ8NBN3 555 aa16.59■□□□□ 0.25
CDC42SE1-203ENST00000470278 PSPC1Q8WXF1 523 aaKnown RBP16.59■□□□□ 0.25
CDC42SE1-203ENST00000470278 PLIN2Q99541 437 aa16.59■□□□□ 0.25
CDC42SE1-203ENST00000470278 CUEDC2Q9H467 287 aa16.59■□□□□ 0.25
CDC42SE1-203ENST00000470278 PRDM6Q9NQX0 595 aa16.59■□□□□ 0.25
CDC42SE1-203ENST00000470278 CXXC1Q9P0U4 656 aaPredicted RBP16.59■□□□□ 0.25
CDC42SE1-203ENST00000470278 SUCLA2Q9P2R7 463 aaPredicted RBP16.59■□□□□ 0.25
CDC42SE1-203ENST00000470278 AKT3Q9Y243 479 aa16.59■□□□□ 0.25
CDC42SE1-203ENST00000470278 TRPV2Q9Y5S1 764 aa16.59■□□□□ 0.25
CDC42SE1-203ENST00000470278 CDY2AQ9Y6F7 541 aa16.59■□□□□ 0.25
CDC42SE1-203ENST00000470278 GPR32O75388 356 aa16.58■□□□□ 0.24
CDC42SE1-203ENST00000470278 VTNP04004 478 aa16.58■□□□□ 0.24
CDC42SE1-203ENST00000470278 ACRP10323 421 aa16.58■□□□□ 0.24
CDC42SE1-203ENST00000470278 ARL2P36404 184 aa16.58■□□□□ 0.24
CDC42SE1-203ENST00000470278 STAT6P42226 847 aa16.58■□□□□ 0.24
CDC42SE1-203ENST00000470278 GPC3P51654 580 aa16.58■□□□□ 0.24
CDC42SE1-203ENST00000470278 CCL23P55773 120 aa16.58■□□□□ 0.24
CDC42SE1-203ENST00000470278 PPIGQ13427 754 aaKnown RBP eCLIP16.58■□□□□ 0.24
CDC42SE1-203ENST00000470278 MXD4Q14582 209 aaPredicted RBP16.58■□□□□ 0.24
CDC42SE1-203ENST00000470278 GPNMBQ14956 572 aa16.58■□□□□ 0.24
CDC42SE1-203ENST00000470278 RINT1Q6NUQ1 792 aa16.58■□□□□ 0.24
CDC42SE1-203ENST00000470278 FAM43BQ6ZT52 329 aaPredicted RBP16.58■□□□□ 0.24
CDC42SE1-203ENST00000470278 C1orf186Q6ZWK4 172 aa16.58■□□□□ 0.24
CDC42SE1-203ENST00000470278 ZNF410Q86VK4 478 aa16.58■□□□□ 0.24
CDC42SE1-203ENST00000470278 SCLYQ96I15 445 aa16.58■□□□□ 0.24
CDC42SE1-203ENST00000470278 PBX4Q9BYU1 374 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms