RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 TARBP2Q15633 366 aaKnown RBP14.96□□□□□ -0.01
CPSF4-210ENST00000469897 NPY5RQ15761 445 aa14.96□□□□□ -0.01
CPSF4-210ENST00000469897 MTERF2Q49AM1 385 aa14.96□□□□□ -0.01
CPSF4-210ENST00000469897 COLGALT1Q8NBJ5 622 aa14.96□□□□□ -0.01
CPSF4-210ENST00000469897 RNF169Q8NCN4 708 aa14.96□□□□□ -0.01
CPSF4-210ENST00000469897 NLRP7Q8WX94 980 aa14.96□□□□□ -0.01
CPSF4-210ENST00000469897 MSLNLQ96KJ4 702 aa14.96□□□□□ -0.01
CPSF4-210ENST00000469897 SCLT1Q96NL6 688 aa14.96□□□□□ -0.01
CPSF4-210ENST00000469897 CASD1Q96PB1 797 aa14.96□□□□□ -0.01
CPSF4-210ENST00000469897 NIFKQ9BYG3 293 aaKnown RBP14.96□□□□□ -0.01
CPSF4-210ENST00000469897 SIP14410 1827 aa14.96□□□□□ -0.01
CPSF4-210ENST00000469897 DCXO43602 365 aa14.95□□□□□ -0.02
CPSF4-210ENST00000469897 PLA2G5P39877 138 aa14.95□□□□□ -0.02
CPSF4-210ENST00000469897 UBE3AQ05086 875 aa14.95□□□□□ -0.02
CPSF4-210ENST00000469897 SCRN1Q12765 414 aa14.95□□□□□ -0.02
CPSF4-210ENST00000469897 SMAD4Q13485 552 aaKnown RBP14.95□□□□□ -0.02
CPSF4-210ENST00000469897 NONOQ15233 471 aaKnown RBP eCLIP14.95□□□□□ -0.02
CPSF4-210ENST00000469897 INF2Q27J81 1249 aa14.95□□□□□ -0.02
CPSF4-210ENST00000469897 XKR3Q5GH77 459 aa14.95□□□□□ -0.02
CPSF4-210ENST00000469897 GALNT17Q6IS24 598 aa14.95□□□□□ -0.02
CPSF4-210ENST00000469897 B3GNT9Q6UX72 402 aa14.95□□□□□ -0.02
CPSF4-210ENST00000469897 ECHDC2Q86YB7 292 aa14.95□□□□□ -0.02
CPSF4-210ENST00000469897 ZNF710Q8N1W2 664 aa14.95□□□□□ -0.02
CPSF4-210ENST00000469897 DAGLBQ8NCG7 672 aa14.95□□□□□ -0.02
CPSF4-210ENST00000469897 MBOAT7Q96N66 472 aa14.95□□□□□ -0.02
CPSF4-210ENST00000469897 TMEM117Q9H0C3 514 aa14.95□□□□□ -0.02
CPSF4-210ENST00000469897 TLR9Q9NR96 1032 aa14.95□□□□□ -0.02
CPSF4-210ENST00000469897 GJB4Q9NTQ9 266 aa14.95□□□□□ -0.02
CPSF4-210ENST00000469897 RNF19AQ9NV58 838 aa14.95□□□□□ -0.02
CPSF4-210ENST00000469897 SEPT9Q9UHD8 586 aaPredicted RBP14.95□□□□□ -0.02
CPSF4-210ENST00000469897 DDX25Q9UHL0 483 aaKnown RBP14.95□□□□□ -0.02
CPSF4-210ENST00000469897 BARX2Q9UMQ3 279 aaPredicted RBP14.95□□□□□ -0.02
CPSF4-210ENST00000469897 HCN4Q9Y3Q4 1203 aa14.95□□□□□ -0.02
CPSF4-210ENST00000469897 PRR33A8MZF0 331 aa14.94□□□□□ -0.02
CPSF4-210ENST00000469897 EYA4O95677 639 aa14.94□□□□□ -0.02
CPSF4-210ENST00000469897 GLP2RO95838 553 aa14.94□□□□□ -0.02
CPSF4-210ENST00000469897 PBX3P40426 434 aa14.94□□□□□ -0.02
CPSF4-210ENST00000469897 RBM10P98175 930 aaKnown RBP14.94□□□□□ -0.02
CPSF4-210ENST00000469897 LETM2Q2VYF4 491 aa14.94□□□□□ -0.02
CPSF4-210ENST00000469897 ABI1Q8IZP0 508 aa14.94□□□□□ -0.02
CPSF4-210ENST00000469897 RDM1Q8NG50 284 aa14.94□□□□□ -0.02
CPSF4-210ENST00000469897 ETNPPLQ8TBG4 499 aa14.94□□□□□ -0.02
CPSF4-210ENST00000469897 CEP89Q96ST8 783 aa14.94□□□□□ -0.02
CPSF4-210ENST00000469897 SLKQ9H2G2 1235 aaPredicted RBP14.94□□□□□ -0.02
CPSF4-210ENST00000469897 PUF60Q9UHX1 559 aaKnown RBP14.94□□□□□ -0.02
CPSF4-210ENST00000469897 A0A087WZ62 844 aa14.93□□□□□ -0.02
CPSF4-210ENST00000469897 A0A0U1RQF3 1178 aa14.93□□□□□ -0.02
CPSF4-210ENST00000469897 EML1O00423 815 aa14.93□□□□□ -0.02
CPSF4-210ENST00000469897 HOXA2O43364 376 aa14.93□□□□□ -0.02
CPSF4-210ENST00000469897 SLC37A4O43826 429 aa14.93□□□□□ -0.02
CPSF4-210ENST00000469897 LAG3P18627 525 aa14.93□□□□□ -0.02
CPSF4-210ENST00000469897 DNM2P50570 870 aa14.93□□□□□ -0.02
CPSF4-210ENST00000469897 PLCB3Q01970 1234 aa14.93□□□□□ -0.02
CPSF4-210ENST00000469897 COASYQ13057 564 aa14.93□□□□□ -0.02
CPSF4-210ENST00000469897 CSPP1Q1MSJ5 1256 aa14.93□□□□□ -0.02
CPSF4-210ENST00000469897 KCNT2Q6UVM3 1135 aa14.93□□□□□ -0.02
CPSF4-210ENST00000469897 MOXD1Q6UVY6 613 aa14.93□□□□□ -0.02
CPSF4-210ENST00000469897 KRT25Q7Z3Z0 450 aa14.93□□□□□ -0.02
CPSF4-210ENST00000469897 KSR1Q8IVT5 923 aa14.93□□□□□ -0.02
CPSF4-210ENST00000469897 VN1R2Q8NFZ6 395 aa14.93□□□□□ -0.02
CPSF4-210ENST00000469897 MRPS27Q92552 414 aaKnown RBP14.93□□□□□ -0.02
CPSF4-210ENST00000469897 FDXACB1Q9BRP7 624 aaPredicted RBP14.93□□□□□ -0.02
CPSF4-210ENST00000469897 PHF20Q9BVI0 1012 aa14.93□□□□□ -0.02
CPSF4-210ENST00000469897 GCOM2Q9BZD3 368 aaPredicted RBP14.93□□□□□ -0.02
CPSF4-210ENST00000469897 SUCLA2Q9P2R7 463 aaPredicted RBP14.93□□□□□ -0.02
CPSF4-210ENST00000469897 IGKV6-21A0A0C4DH24 114 aa14.92□□□□□ -0.02
CPSF4-210ENST00000469897 FSCN2O14926 492 aa14.92□□□□□ -0.02
CPSF4-210ENST00000469897 MAFO75444 373 aaPredicted RBP14.92□□□□□ -0.02
CPSF4-210ENST00000469897 PSMC5P62195 406 aa14.92□□□□□ -0.02
CPSF4-210ENST00000469897 CDC42EP1Q00587 391 aa14.92□□□□□ -0.02
CPSF4-210ENST00000469897 KRT17Q04695 432 aa14.92□□□□□ -0.02
CPSF4-210ENST00000469897 DUSP6Q16828 381 aa14.92□□□□□ -0.02
CPSF4-210ENST00000469897 LONRF3Q496Y0 759 aa14.92□□□□□ -0.02
CPSF4-210ENST00000469897 CLLU1OSQ5K130 101 aa14.92□□□□□ -0.02
CPSF4-210ENST00000469897 PDE12Q6L8Q7 609 aaKnown RBP14.92□□□□□ -0.02
CPSF4-210ENST00000469897 ANO5Q75V66 913 aa14.92□□□□□ -0.02
CPSF4-210ENST00000469897 RHPN2Q8IUC4 686 aa14.92□□□□□ -0.02
CPSF4-210ENST00000469897 RNF135Q8IUD6 432 aa14.92□□□□□ -0.02
CPSF4-210ENST00000469897 ZNF579Q8NAF0 562 aaKnown RBP14.92□□□□□ -0.02
CPSF4-210ENST00000469897 HELQQ8TDG4 1101 aa14.92□□□□□ -0.02
CPSF4-210ENST00000469897 OXER1Q8TDS5 423 aa14.92□□□□□ -0.02
CPSF4-210ENST00000469897 ZNF558Q96NG5 402 aa14.92□□□□□ -0.02
CPSF4-210ENST00000469897 POP1Q99575 1024 aaKnown RBP14.92□□□□□ -0.02
CPSF4-210ENST00000469897 TCF25Q9BQ70 676 aa14.92□□□□□ -0.02
CPSF4-210ENST00000469897 MUTYHQ9UIF7 546 aa14.92□□□□□ -0.02
CPSF4-210ENST00000469897 TPCN1Q9ULQ1 816 aa14.92□□□□□ -0.02
CPSF4-210ENST00000469897 TTC3P53804 2025 aa14.92□□□□□ -0.02
CPSF4-210ENST00000469897 CCDC194A0A1B0GVG4 234 aa14.91□□□□□ -0.02
CPSF4-210ENST00000469897 CCNT1O60563 726 aaKnown RBP14.91□□□□□ -0.02
CPSF4-210ENST00000469897 CDKL5O76039 1030 aa14.91□□□□□ -0.02
CPSF4-210ENST00000469897 EOMESO95936 686 aa14.91□□□□□ -0.02
CPSF4-210ENST00000469897 NPEPPSP55786 919 aa14.91□□□□□ -0.02
CPSF4-210ENST00000469897 PLPP4Q5VZY2 271 aa14.91□□□□□ -0.02
CPSF4-210ENST00000469897 PLA2G4FQ68DD2 849 aa14.91□□□□□ -0.02
CPSF4-210ENST00000469897 PPP4R3AQ6IN85 833 aa14.91□□□□□ -0.02
CPSF4-210ENST00000469897 PIK3AP1Q6ZUJ8 805 aa14.91□□□□□ -0.02
CPSF4-210ENST00000469897 TMC7Q7Z402 723 aa14.91□□□□□ -0.02
CPSF4-210ENST00000469897 ZNF598Q86UK7 904 aaKnown RBP14.91□□□□□ -0.02
CPSF4-210ENST00000469897 FAM177A1Q8N128 213 aaPredicted RBP14.91□□□□□ -0.02
CPSF4-210ENST00000469897 SMRP1Q8NCR6 262 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms