RNA–Protein interactions for RNA: ENST00000463183.1

LINC00960-201, long intergenic non-protein coding RNA 960, humanhuman

TSL 1 (best) BASIC

Gene LINC00960, Length 1,333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00960-201ENST00000463183 ZSWIM4Q9H7M6 989 aa20.12■□□□□ 0.81
LINC00960-201ENST00000463183 PCDHB7Q9Y5E2 793 aa20.12■□□□□ 0.81
LINC00960-201ENST00000463183 CUL9Q8IWT3 2517 aa20.12■□□□□ 0.81
LINC00960-201ENST00000463183 A0A087WWV3 80 aa20.11■□□□□ 0.81
LINC00960-201ENST00000463183 A0A087WZ62 844 aa20.11■□□□□ 0.81
LINC00960-201ENST00000463183 MAFO75444 373 aaPredicted RBP20.11■□□□□ 0.81
LINC00960-201ENST00000463183 DGKIO75912 1065 aa20.11■□□□□ 0.81
LINC00960-201ENST00000463183 EIF4BP23588 611 aaKnown RBP20.11■□□□□ 0.81
LINC00960-201ENST00000463183 SARSP49591 514 aaKnown RBP20.11■□□□□ 0.81
LINC00960-201ENST00000463183 GPM6BQ13491 265 aa20.11■□□□□ 0.81
LINC00960-201ENST00000463183 TTC38Q5R3I4 469 aa20.11■□□□□ 0.81
LINC00960-201ENST00000463183 MCTP1Q6DN14 999 aa20.11■□□□□ 0.81
LINC00960-201ENST00000463183 NOSTRINQ8IVI9 506 aa20.11■□□□□ 0.81
LINC00960-201ENST00000463183 RNF169Q8NCN4 708 aa20.11■□□□□ 0.81
LINC00960-201ENST00000463183 SLC7A3Q8WY07 619 aa20.11■□□□□ 0.81
LINC00960-201ENST00000463183 TMEM143Q96AN5 459 aa20.11■□□□□ 0.81
LINC00960-201ENST00000463183 CCDC43Q96MW1 224 aaKnown RBP20.11■□□□□ 0.81
LINC00960-201ENST00000463183 CEP89Q96ST8 783 aa20.11■□□□□ 0.81
LINC00960-201ENST00000463183 FDXACB1Q9BRP7 624 aaPredicted RBP20.11■□□□□ 0.81
LINC00960-201ENST00000463183 THEGQ9P2T0 379 aa20.11■□□□□ 0.81
LINC00960-201ENST00000463183 NOL7Q9UMY1 257 aaKnown RBP20.11■□□□□ 0.81
LINC00960-201ENST00000463183 SLITRK3O94933 977 aa20.1■□□□□ 0.81
LINC00960-201ENST00000463183 DARSP14868 501 aaKnown RBP20.1■□□□□ 0.81
LINC00960-201ENST00000463183 ZSCAN20P17040 1043 aaPredicted RBP20.1■□□□□ 0.81
LINC00960-201ENST00000463183 OTUD6AQ7L8S5 288 aa20.1■□□□□ 0.81
LINC00960-201ENST00000463183 C4orf19Q8IY42 314 aa20.1■□□□□ 0.81
LINC00960-201ENST00000463183 SAMD11Q96NU1 681 aa20.1■□□□□ 0.81
LINC00960-201ENST00000463183 MTMR9Q96QG7 549 aa20.1■□□□□ 0.81
LINC00960-201ENST00000463183 JPH2Q9BR39 696 aaPredicted RBP20.1■□□□□ 0.81
LINC00960-201ENST00000463183 GCOM2Q9BZD3 368 aaPredicted RBP20.1■□□□□ 0.81
LINC00960-201ENST00000463183 RGS18Q9NS28 235 aa20.1■□□□□ 0.81
LINC00960-201ENST00000463183 C1orf112Q9NSG2 853 aa20.1■□□□□ 0.81
LINC00960-201ENST00000463183 KIF3AQ9Y496 699 aa20.1■□□□□ 0.81
LINC00960-201ENST00000463183 MRPL42Q9Y6G3 142 aaKnown RBP20.1■□□□□ 0.81
LINC00960-201ENST00000463183 IGKV6-21A0A0C4DH24 114 aa20.09■□□□□ 0.81
LINC00960-201ENST00000463183 GJB2P29033 226 aa20.09■□□□□ 0.81
LINC00960-201ENST00000463183 TECP42680 631 aa20.09■□□□□ 0.81
LINC00960-201ENST00000463183 SPOUT1Q5T280 376 aaKnown RBP20.09■□□□□ 0.81
LINC00960-201ENST00000463183 SLC24A5Q71RS6 500 aa20.09■□□□□ 0.81
LINC00960-201ENST00000463183 ZNF689Q96CS4 500 aaPredicted RBP20.09■□□□□ 0.81
LINC00960-201ENST00000463183 RC3H2Q9HBD1 1191 aaKnown RBP20.09■□□□□ 0.81
LINC00960-201ENST00000463183 REV3LO60673 3130 aa20.09■□□□□ 0.81
LINC00960-201ENST00000463183 TBKBP1A7MCY6 615 aa20.08■□□□□ 0.81
LINC00960-201ENST00000463183 OR52Z1P0C646 297 aa20.08■□□□□ 0.81
LINC00960-201ENST00000463183 POU3F3P20264 500 aaPredicted RBP20.08■□□□□ 0.81
LINC00960-201ENST00000463183 EMC2Q15006 297 aa20.08■□□□□ 0.81
LINC00960-201ENST00000463183 FAM102BQ5T8I3 360 aa20.08■□□□□ 0.81
LINC00960-201ENST00000463183 ATP6V0A4Q9HBG4 840 aa20.08■□□□□ 0.81
LINC00960-201ENST00000463183 C9IYK1 514 aa20.07■□□□□ 0.8
LINC00960-201ENST00000463183 H3BNC9 293 aa20.07■□□□□ 0.8
LINC00960-201ENST00000463183 H3BQV1 296 aa20.07■□□□□ 0.8
LINC00960-201ENST00000463183 SRGAP2CP0DJJ0 459 aa20.07■□□□□ 0.8
LINC00960-201ENST00000463183 FGFR1P11362 822 aa20.07■□□□□ 0.8
LINC00960-201ENST00000463183 RFC5P40937 340 aa20.07■□□□□ 0.8
LINC00960-201ENST00000463183 TFF2Q03403 129 aa20.07■□□□□ 0.8
LINC00960-201ENST00000463183 PTPROQ16827 1216 aa20.07■□□□□ 0.8
LINC00960-201ENST00000463183 CMTR2Q8IYT2 770 aaKnown RBP20.07■□□□□ 0.8
LINC00960-201ENST00000463183 ZNF710Q8N1W2 664 aa20.07■□□□□ 0.8
LINC00960-201ENST00000463183 PIGOQ8TEQ8 1089 aa20.07■□□□□ 0.8
LINC00960-201ENST00000463183 COL25A1Q9BXS0 654 aaPredicted RBP20.07■□□□□ 0.8
LINC00960-201ENST00000463183 SMC3Q9UQE7 1217 aa20.07■□□□□ 0.8
LINC00960-201ENST00000463183 COL4A3BPQ9Y5P4 624 aa20.07■□□□□ 0.8
LINC00960-201ENST00000463183 SFPQP23246 707 aaKnown RBP eCLIP20.06■□□□□ 0.8
LINC00960-201ENST00000463183 BMPR1AP36894 532 aa20.06■□□□□ 0.8
LINC00960-201ENST00000463183 MCM2P49736 904 aa20.06■□□□□ 0.8
LINC00960-201ENST00000463183 DSC3Q14574 896 aa20.06■□□□□ 0.8
LINC00960-201ENST00000463183 CATSPER4Q7RTX7 472 aa20.06■□□□□ 0.8
LINC00960-201ENST00000463183 IL27Q8NEV9 243 aa20.06■□□□□ 0.8
LINC00960-201ENST00000463183 NEK9Q8TD19 979 aa20.06■□□□□ 0.8
LINC00960-201ENST00000463183 PRPF31Q8WWY3 499 aaKnown RBP20.06■□□□□ 0.8
LINC00960-201ENST00000463183 PSPC1Q8WXF1 523 aaKnown RBP20.06■□□□□ 0.8
LINC00960-201ENST00000463183 MTRQ99707 1265 aa20.06■□□□□ 0.8
LINC00960-201ENST00000463183 HSD17B14Q9BPX1 270 aa20.06■□□□□ 0.8
LINC00960-201ENST00000463183 DHX33Q9H6R0 707 aaKnown RBP20.06■□□□□ 0.8
LINC00960-201ENST00000463183 PIN4Q9Y237 131 aaKnown RBP20.06■□□□□ 0.8
LINC00960-201ENST00000463183 RWDD3Q9Y3V2 267 aa20.06■□□□□ 0.8
LINC00960-201ENST00000463183 NLRC5Q86WI3 1866 aa20.06■□□□□ 0.8
LINC00960-201ENST00000463183 XIRP2A4UGR9 3374 aa20.06■□□□□ 0.8
LINC00960-201ENST00000463183 CDC42EP1Q00587 391 aa20.05■□□□□ 0.8
LINC00960-201ENST00000463183 LONRF3Q496Y0 759 aa20.05■□□□□ 0.8
LINC00960-201ENST00000463183 ZNF410Q86VK4 478 aa20.05■□□□□ 0.8
LINC00960-201ENST00000463183 CRIPAKQ8N1N5 446 aa20.05■□□□□ 0.8
LINC00960-201ENST00000463183 C11orf84Q9BUA3 381 aaPredicted RBP20.05■□□□□ 0.8
LINC00960-201ENST00000463183 ALG13Q9NP73 1137 aaKnown RBP20.05■□□□□ 0.8
LINC00960-201ENST00000463183 TMEM161AQ9NX61 479 aa20.05■□□□□ 0.8
LINC00960-201ENST00000463183 LMCD1Q9NZU5 365 aa20.05■□□□□ 0.8
LINC00960-201ENST00000463183 HCSTQ9UBK5 93 aa20.05■□□□□ 0.8
LINC00960-201ENST00000463183 MYO7AQ13402 2215 aa20.05■□□□□ 0.8
LINC00960-201ENST00000463183 GRM6O15303 877 aa20.04■□□□□ 0.8
LINC00960-201ENST00000463183 MED24O75448 989 aa20.04■□□□□ 0.8
LINC00960-201ENST00000463183 LINC00271P0C7V0 271 aa20.04■□□□□ 0.8
LINC00960-201ENST00000463183 U2AF2P26368 475 aaKnown RBP eCLIP20.04■□□□□ 0.8
LINC00960-201ENST00000463183 LAMTOR4Q0VGL1 99 aa20.04■□□□□ 0.8
LINC00960-201ENST00000463183 TJAP1Q5JTD0 557 aa20.04■□□□□ 0.8
LINC00960-201ENST00000463183 TWF2Q6IBS0 349 aaKnown RBP20.04■□□□□ 0.8
LINC00960-201ENST00000463183 EP400NLQ6ZTU2 488 aa20.04■□□□□ 0.8
LINC00960-201ENST00000463183 MAEAQ7L5Y9 396 aa20.04■□□□□ 0.8
LINC00960-201ENST00000463183 EXOC8Q8IYI6 725 aa20.04■□□□□ 0.8
LINC00960-201ENST00000463183 ABI1Q8IZP0 508 aa20.04■□□□□ 0.8
LINC00960-201ENST00000463183 ERMNQ8TAM6 284 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 956.9 ms