RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 GPC3P51654 580 aa11.89□□□□□ -0.51
UBR4-208ENST00000459947 HABP4Q5JVS0 413 aaKnown RBP11.89□□□□□ -0.51
UBR4-208ENST00000459947 FAM109BQ6ICB4 259 aaPredicted RBP11.89□□□□□ -0.51
UBR4-208ENST00000459947 PADI6Q6TGC4 694 aa11.89□□□□□ -0.51
UBR4-208ENST00000459947 DDX19AQ9NUU7 478 aaKnown RBP11.89□□□□□ -0.51
UBR4-208ENST00000459947 DACT1Q9NYF0 836 aa11.89□□□□□ -0.51
UBR4-208ENST00000459947 USP25Q9UHP3 1055 aa11.89□□□□□ -0.51
UBR4-208ENST00000459947 FBXO2Q9UK22 296 aaPredicted RBP11.89□□□□□ -0.51
UBR4-208ENST00000459947 NBNO60934 754 aa11.88□□□□□ -0.51
UBR4-208ENST00000459947 CLCN3P51790 818 aa11.88□□□□□ -0.51
UBR4-208ENST00000459947 PLA2G4FQ68DD2 849 aa11.88□□□□□ -0.51
UBR4-208ENST00000459947 NLRP7Q8WX94 980 aa11.88□□□□□ -0.51
UBR4-208ENST00000459947 BMP2KQ9NSY1 1161 aaPredicted RBP11.88□□□□□ -0.51
UBR4-208ENST00000459947 PCDHA11Q9Y5I1 949 aa11.88□□□□□ -0.51
UBR4-208ENST00000459947 CLIC4Q9Y696 253 aa11.88□□□□□ -0.51
UBR4-208ENST00000459947 CHRNA1P02708 482 aa11.88□□□□□ -0.51
UBR4-208ENST00000459947 RAB27AP51159 221 aa11.88□□□□□ -0.51
UBR4-208ENST00000459947 LPIN1Q14693 890 aa11.88□□□□□ -0.51
UBR4-208ENST00000459947 SHHQ15465 462 aa11.88□□□□□ -0.51
UBR4-208ENST00000459947 COL4A6Q14031 1691 aa11.88□□□□□ -0.51
UBR4-208ENST00000459947 DARSP14868 501 aaKnown RBP11.88□□□□□ -0.51
UBR4-208ENST00000459947 EIF4BP23588 611 aaKnown RBP11.88□□□□□ -0.51
UBR4-208ENST00000459947 GUCY2CP25092 1073 aa11.88□□□□□ -0.51
UBR4-208ENST00000459947 NLRP11P59045 1033 aaKnown RBP11.88□□□□□ -0.51
UBR4-208ENST00000459947 POTEGQ6S5H5 508 aa11.88□□□□□ -0.51
UBR4-208ENST00000459947 CNNM3Q8NE01 707 aa11.88□□□□□ -0.51
UBR4-208ENST00000459947 WNT8BQ93098 351 aa11.88□□□□□ -0.51
UBR4-208ENST00000459947 ERVK-5Q9HDB9 667 aa11.88□□□□□ -0.51
UBR4-208ENST00000459947 ODF2LQ9ULJ1 636 aa11.88□□□□□ -0.51
UBR4-208ENST00000459947 ZSCAN20P17040 1043 aaPredicted RBP11.87□□□□□ -0.51
UBR4-208ENST00000459947 EFNA5P52803 228 aa11.87□□□□□ -0.51
UBR4-208ENST00000459947 HACE1Q8IYU2 909 aa11.87□□□□□ -0.51
UBR4-208ENST00000459947 SAMD11Q96NU1 681 aa11.87□□□□□ -0.51
UBR4-208ENST00000459947 ZMYM2Q9UBW7 1377 aa11.87□□□□□ -0.51
UBR4-208ENST00000459947 GHRP10912 638 aa11.87□□□□□ -0.51
UBR4-208ENST00000459947 ARL2P36404 184 aa11.87□□□□□ -0.51
UBR4-208ENST00000459947 NPEPPSP55786 919 aa11.87□□□□□ -0.51
UBR4-208ENST00000459947 ADAMTS10Q9H324 1103 aa11.87□□□□□ -0.51
UBR4-208ENST00000459947 RCOR1Q9UKL0 485 aa11.87□□□□□ -0.51
UBR4-208ENST00000459947 USO1O60763 962 aaKnown RBP11.87□□□□□ -0.51
UBR4-208ENST00000459947 GPR32O75388 356 aa11.87□□□□□ -0.51
UBR4-208ENST00000459947 ACRP10323 421 aa11.87□□□□□ -0.51
UBR4-208ENST00000459947 LRRC71Q8N4P6 559 aa11.87□□□□□ -0.51
UBR4-208ENST00000459947 SYT2Q8N9I0 419 aaPredicted RBP11.87□□□□□ -0.51
UBR4-208ENST00000459947 DBF4BQ8NFT6 615 aa11.87□□□□□ -0.51
UBR4-208ENST00000459947 PRIMPOLQ96LW4 560 aa11.87□□□□□ -0.51
UBR4-208ENST00000459947 POLR3FQ9H1D9 316 aaPredicted RBP11.87□□□□□ -0.51
UBR4-208ENST00000459947 ELAC1Q9H777 363 aaKnown RBP11.87□□□□□ -0.51
UBR4-208ENST00000459947 RWDD3Q9Y3V2 267 aa11.87□□□□□ -0.51
UBR4-208ENST00000459947 RBM19Q9Y4C8 960 aaKnown RBP11.87□□□□□ -0.51
UBR4-208ENST00000459947 ATP2A2P16615 1042 aaKnown RBP11.86□□□□□ -0.51
UBR4-208ENST00000459947 NAMPTP43490 491 aa11.86□□□□□ -0.51
UBR4-208ENST00000459947 AMPD3Q01432 767 aa11.86□□□□□ -0.51
UBR4-208ENST00000459947 RRAGBQ5VZM2 374 aa11.86□□□□□ -0.51
UBR4-208ENST00000459947 PPP1R13LQ8WUF5 828 aa11.86□□□□□ -0.51
UBR4-208ENST00000459947 WRAP73Q9P2S5 460 aaPredicted RBP11.86□□□□□ -0.51
UBR4-208ENST00000459947 RHPN2Q8IUC4 686 aa11.86□□□□□ -0.51
UBR4-208ENST00000459947 NPAS4Q8IUM7 802 aa11.86□□□□□ -0.51
UBR4-208ENST00000459947 BHMT2Q9H2M3 363 aa11.86□□□□□ -0.51
UBR4-208ENST00000459947 PRMT7Q9NVM4 692 aaPredicted RBP11.86□□□□□ -0.51
UBR4-208ENST00000459947 WDR5P61964 334 aaKnown RBP11.86□□□□□ -0.51
UBR4-208ENST00000459947 LAMTOR4Q0VGL1 99 aa11.86□□□□□ -0.51
UBR4-208ENST00000459947 GRB10Q13322 594 aa11.86□□□□□ -0.51
UBR4-208ENST00000459947 IL17AQ16552 155 aa11.86□□□□□ -0.51
UBR4-208ENST00000459947 SPRYD3Q8NCJ5 442 aa11.86□□□□□ -0.51
UBR4-208ENST00000459947 PIGOQ8TEQ8 1089 aa11.86□□□□□ -0.51
UBR4-208ENST00000459947 MMTAG2Q9BU76 263 aaKnown RBP11.86□□□□□ -0.51
UBR4-208ENST00000459947 TSPYL2Q9H2G4 693 aaPredicted RBP11.86□□□□□ -0.51
UBR4-208ENST00000459947 PADI3Q9ULW8 664 aa11.86□□□□□ -0.51
UBR4-208ENST00000459947 VTNP04004 478 aa11.86□□□□□ -0.51
UBR4-208ENST00000459947 PLA2G4BP0C869 781 aa11.86□□□□□ -0.51
UBR4-208ENST00000459947 SMTNP53814 917 aa11.86□□□□□ -0.51
UBR4-208ENST00000459947 EPHB4P54760 987 aa11.86□□□□□ -0.51
UBR4-208ENST00000459947 MBTPS1Q14703 1052 aa11.86□□□□□ -0.51
UBR4-208ENST00000459947 DEPTORQ8TB45 409 aa11.86□□□□□ -0.51
UBR4-208ENST00000459947 RAD54LQ92698 747 aa11.86□□□□□ -0.51
UBR4-208ENST00000459947 SPATA32Q96LK8 384 aa11.86□□□□□ -0.51
UBR4-208ENST00000459947 TRAIPQ9BWF2 469 aa11.86□□□□□ -0.51
UBR4-208ENST00000459947 CSRNP2Q9H175 543 aa11.86□□□□□ -0.51
UBR4-208ENST00000459947 CHMP5Q9NZZ3 219 aa11.86□□□□□ -0.51
UBR4-208ENST00000459947 LRFN2Q9ULH4 789 aa11.86□□□□□ -0.51
UBR4-208ENST00000459947 DENND3A2RUS2 1198 aa11.85□□□□□ -0.51
UBR4-208ENST00000459947 PTENP60484 403 aa11.85□□□□□ -0.51
UBR4-208ENST00000459947 C16orf59Q7L2K0 433 aa11.85□□□□□ -0.51
UBR4-208ENST00000459947 CATSPER4Q7RTX7 472 aa11.85□□□□□ -0.51
UBR4-208ENST00000459947 TRMT1LQ7Z2T5 733 aaKnown RBP11.85□□□□□ -0.51
UBR4-208ENST00000459947 PRPF31Q8WWY3 499 aaKnown RBP11.85□□□□□ -0.51
UBR4-208ENST00000459947 LARP4BQ92615 738 aaKnown RBP11.85□□□□□ -0.51
UBR4-208ENST00000459947 KCNN1Q92952 543 aa11.85□□□□□ -0.51
UBR4-208ENST00000459947 OSMRQ99650 979 aa11.85□□□□□ -0.51
UBR4-208ENST00000459947 XPNPEP1Q9NQW7 623 aa11.85□□□□□ -0.51
UBR4-208ENST00000459947 LARSQ9P2J5 1176 aaKnown RBP11.85□□□□□ -0.51
UBR4-208ENST00000459947 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.85□□□□□ -0.51
UBR4-208ENST00000459947 EVPLQ92817 2033 aa11.85□□□□□ -0.51
UBR4-208ENST00000459947 ERLIN2O94905 339 aa11.85□□□□□ -0.51
UBR4-208ENST00000459947 KRT18P05783 430 aaKnown RBP11.85□□□□□ -0.51
UBR4-208ENST00000459947 ME1P48163 572 aa11.85□□□□□ -0.51
UBR4-208ENST00000459947 SARSP49591 514 aaKnown RBP11.85□□□□□ -0.51
UBR4-208ENST00000459947 DMP1Q13316 513 aaPredicted RBP11.85□□□□□ -0.51
UBR4-208ENST00000459947 HSP90AA2PQ14568 343 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms