RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 DARSP14868 501 aaKnown RBP21.76■■□□□ 1.07
USP40-207ENST00000450940 DRP2Q13474 957 aa21.76■■□□□ 1.07
USP40-207ENST00000450940 TRIM29Q14134 588 aa21.76■■□□□ 1.07
USP40-207ENST00000450940 TIGD5Q53EQ6 642 aa21.76■■□□□ 1.07
USP40-207ENST00000450940 NAALADL2Q58DX5 795 aa21.76■■□□□ 1.07
USP40-207ENST00000450940 C4orf19Q8IY42 314 aa21.76■■□□□ 1.07
USP40-207ENST00000450940 ADAMTS19Q8TE59 1207 aa21.76■■□□□ 1.07
USP40-207ENST00000450940 ZSCAN31Q96LW9 406 aaPredicted RBP21.76■■□□□ 1.07
USP40-207ENST00000450940 WRAP73Q9P2S5 460 aaPredicted RBP21.76■■□□□ 1.07
USP40-207ENST00000450940 PPME1Q9Y570 386 aa21.76■■□□□ 1.07
USP40-207ENST00000450940 RBM25P49756 843 aaKnown RBP21.75■■□□□ 1.07
USP40-207ENST00000450940 DNM2P50570 870 aa21.75■■□□□ 1.07
USP40-207ENST00000450940 COL19A1Q14993 1142 aa21.75■■□□□ 1.07
USP40-207ENST00000450940 JPH2Q9BR39 696 aaPredicted RBP21.75■■□□□ 1.07
USP40-207ENST00000450940 CYP26B1Q9NR63 512 aa21.75■■□□□ 1.07
USP40-207ENST00000450940 TMEM161AQ9NX61 479 aa21.75■■□□□ 1.07
USP40-207ENST00000450940 GRM6O15303 877 aa21.74■■□□□ 1.07
USP40-207ENST00000450940 MARCH6O60337 910 aa21.74■■□□□ 1.07
USP40-207ENST00000450940 GATMP50440 423 aa21.74■■□□□ 1.07
USP40-207ENST00000450940 KCNQ1P51787 676 aa21.74■■□□□ 1.07
USP40-207ENST00000450940 CCDC83Q8IWF9 413 aa21.74■■□□□ 1.07
USP40-207ENST00000450940 SH2D3AQ9BRG2 576 aa21.74■■□□□ 1.07
USP40-207ENST00000450940 SH2B1Q9NRF2 756 aaPredicted RBP21.74■■□□□ 1.07
USP40-207ENST00000450940 ARID2Q68CP9 1835 aa21.73■■□□□ 1.07
USP40-207ENST00000450940 WNT7AO00755 349 aa21.73■■□□□ 1.07
USP40-207ENST00000450940 PLA2G4FQ68DD2 849 aa21.73■■□□□ 1.07
USP40-207ENST00000450940 EXOC8Q8IYI6 725 aa21.73■■□□□ 1.07
USP40-207ENST00000450940 IL27Q8NEV9 243 aa21.73■■□□□ 1.07
USP40-207ENST00000450940 MTMR9Q96QG7 549 aa21.73■■□□□ 1.07
USP40-207ENST00000450940 NSUN3Q9H649 340 aaKnown RBP21.73■■□□□ 1.07
USP40-207ENST00000450940 DHX33Q9H6R0 707 aaKnown RBP21.73■■□□□ 1.07
USP40-207ENST00000450940 UBE2ZQ9H832 354 aaPredicted RBP21.73■■□□□ 1.07
USP40-207ENST00000450940 SUCLA2Q9P2R7 463 aaPredicted RBP21.73■■□□□ 1.07
USP40-207ENST00000450940 PCDHA12Q9UN75 941 aa21.73■■□□□ 1.07
USP40-207ENST00000450940 PLAGL2Q9UPG8 496 aa21.73■■□□□ 1.07
USP40-207ENST00000450940 TNFRSF10AO00220 468 aa21.72■■□□□ 1.07
USP40-207ENST00000450940 ZSCAN20P17040 1043 aaPredicted RBP21.72■■□□□ 1.07
USP40-207ENST00000450940 NPEPPSP55786 919 aa21.72■■□□□ 1.07
USP40-207ENST00000450940 CAMK1Q14012 370 aa21.72■■□□□ 1.07
USP40-207ENST00000450940 PAN2Q504Q3 1202 aaKnown RBP21.72■■□□□ 1.07
USP40-207ENST00000450940 FAM102BQ5T8I3 360 aa21.72■■□□□ 1.07
USP40-207ENST00000450940 NCAPH2Q6IBW4 605 aa21.72■■□□□ 1.07
USP40-207ENST00000450940 ZNF410Q86VK4 478 aa21.72■■□□□ 1.07
USP40-207ENST00000450940 ZNF579Q8NAF0 562 aaKnown RBP21.72■■□□□ 1.07
USP40-207ENST00000450940 NLRP7Q8WX94 980 aa21.72■■□□□ 1.07
USP40-207ENST00000450940 ZNF668Q96K58 619 aaPredicted RBP21.72■■□□□ 1.07
USP40-207ENST00000450940 HSD17B14Q9BPX1 270 aa21.72■■□□□ 1.07
USP40-207ENST00000450940 LXNQ9BS40 222 aa21.72■■□□□ 1.07
USP40-207ENST00000450940 GCOM2Q9BZD3 368 aaPredicted RBP21.72■■□□□ 1.07
USP40-207ENST00000450940 ZSWIM4Q9H7M6 989 aa21.72■■□□□ 1.07
USP40-207ENST00000450940 ATP6V0A4Q9HBG4 840 aa21.72■■□□□ 1.07
USP40-207ENST00000450940 RGL1Q9NZL6 768 aa21.72■■□□□ 1.07
USP40-207ENST00000450940 SLITRK3O94933 977 aa21.71■■□□□ 1.07
USP40-207ENST00000450940 LYPLA2O95372 231 aa21.71■■□□□ 1.07
USP40-207ENST00000450940 RFC5P40937 340 aa21.71■■□□□ 1.07
USP40-207ENST00000450940 FOSBP53539 338 aa21.71■■□□□ 1.07
USP40-207ENST00000450940 HMGN5P82970 282 aaKnown RBP21.71■■□□□ 1.07
USP40-207ENST00000450940 SAFBQ15424 915 aaKnown RBP eCLIP21.71■■□□□ 1.07
USP40-207ENST00000450940 CALCRLQ16602 461 aa21.71■■□□□ 1.07
USP40-207ENST00000450940 TCEAL5Q5H9L2 206 aa21.71■■□□□ 1.07
USP40-207ENST00000450940 SPPL3Q8TCT6 385 aa21.71■■□□□ 1.07
USP40-207ENST00000450940 DYDC2Q96IM9 177 aa21.71■■□□□ 1.07
USP40-207ENST00000450940 CEP170P1Q96L14 293 aa21.71■■□□□ 1.07
USP40-207ENST00000450940 UHRF1Q96T88 793 aaPredicted RBP21.71■■□□□ 1.07
USP40-207ENST00000450940 CHST12Q9NRB3 414 aa21.71■■□□□ 1.07
USP40-207ENST00000450940 MUC3AQ02505 3323 aa21.71■■□□□ 1.07
USP40-207ENST00000450940 PLXNA4Q9HCM2 1894 aa21.71■■□□□ 1.07
USP40-207ENST00000450940 A0A087WZ62 844 aa21.7■■□□□ 1.06
USP40-207ENST00000450940 A0A0U1RQF3 1178 aa21.7■■□□□ 1.06
USP40-207ENST00000450940 TBKBP1A7MCY6 615 aa21.7■■□□□ 1.06
USP40-207ENST00000450940 NEMFO60524 1076 aa21.7■■□□□ 1.06
USP40-207ENST00000450940 ITGB1P05556 798 aa21.7■■□□□ 1.06
USP40-207ENST00000450940 YWHABP31946 246 aaKnown RBP21.7■■□□□ 1.06
USP40-207ENST00000450940 LEXMQ3ZCV2 418 aa21.7■■□□□ 1.06
USP40-207ENST00000450940 OTUD6AQ7L8S5 288 aa21.7■■□□□ 1.06
USP40-207ENST00000450940 ECHDC2Q86YB7 292 aa21.7■■□□□ 1.06
USP40-207ENST00000450940 KLHL23Q8NBE8 558 aa21.7■■□□□ 1.06
USP40-207ENST00000450940 FBXO18Q8NFZ0 1043 aa21.7■■□□□ 1.06
USP40-207ENST00000450940 SLC7A3Q8WY07 619 aa21.7■■□□□ 1.06
USP40-207ENST00000450940 C8orf76Q96K31 380 aa21.7■■□□□ 1.06
USP40-207ENST00000450940 SCLT1Q96NL6 688 aa21.7■■□□□ 1.06
USP40-207ENST00000450940 FDXACB1Q9BRP7 624 aaPredicted RBP21.7■■□□□ 1.06
USP40-207ENST00000450940 TRAIPQ9BWF2 469 aa21.7■■□□□ 1.06
USP40-207ENST00000450940 INO80BQ9C086 356 aaPredicted RBP21.7■■□□□ 1.06
USP40-207ENST00000450940 FOXP1Q9H334 677 aaPredicted RBP21.7■■□□□ 1.06
USP40-207ENST00000450940 TTC12Q9H892 705 aaPredicted RBP21.7■■□□□ 1.06
USP40-207ENST00000450940 ALG13Q9NP73 1137 aaKnown RBP21.7■■□□□ 1.06
USP40-207ENST00000450940 RNF19AQ9NV58 838 aa21.7■■□□□ 1.06
USP40-207ENST00000450940 HOXA2O43364 376 aa21.69■■□□□ 1.06
USP40-207ENST00000450940 NCK2O43639 380 aa21.69■■□□□ 1.06
USP40-207ENST00000450940 CSDE1O75534 798 aaKnown RBP21.69■■□□□ 1.06
USP40-207ENST00000450940 EOMESO95936 686 aa21.69■■□□□ 1.06
USP40-207ENST00000450940 FGFR4P22455 802 aa21.69■■□□□ 1.06
USP40-207ENST00000450940 CTTNQ14247 550 aaKnown RBP21.69■■□□□ 1.06
USP40-207ENST00000450940 ZNF598Q86UK7 904 aaKnown RBP21.69■■□□□ 1.06
USP40-207ENST00000450940 RHPN2Q8IUC4 686 aa21.69■■□□□ 1.06
USP40-207ENST00000450940 NEK9Q8TD19 979 aa21.69■■□□□ 1.06
USP40-207ENST00000450940 PABPC5Q96DU9 382 aaKnown RBP21.69■■□□□ 1.06
USP40-207ENST00000450940 EIF2AK1Q9BQI3 630 aaKnown RBP21.69■■□□□ 1.06
USP40-207ENST00000450940 TMEM117Q9H0C3 514 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms