RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 COA7Q96BR5 231 aa15.09■□□□□ 0.01
VPS52-212ENST00000445902 FAM84BQ96KN1 310 aaPredicted RBP15.09■□□□□ 0.01
VPS52-212ENST00000445902 CEP63Q96MT8 703 aa15.09■□□□□ 0.01
VPS52-212ENST00000445902 ARHGEF3Q9NR81 526 aa15.09■□□□□ 0.01
VPS52-212ENST00000445902 EMILIN3Q9NT22 766 aa15.09■□□□□ 0.01
VPS52-212ENST00000445902 CTNNAL1Q9UBT7 734 aa15.09■□□□□ 0.01
VPS52-212ENST00000445902 GOLGA6L10A0A0M3HER8 536 aa15.09■□□□□ 0.01
VPS52-212ENST00000445902 TMEM120BA0PK00 339 aa15.09■□□□□ 0.01
VPS52-212ENST00000445902 SPDYE5A6NIY4 337 aa15.09■□□□□ 0.01
VPS52-212ENST00000445902 CASP5P51878 434 aa15.09■□□□□ 0.01
VPS52-212ENST00000445902 SEPT14Q6ZU15 432 aa15.09■□□□□ 0.01
VPS52-212ENST00000445902 SYCE1Q8N0S2 351 aa15.09■□□□□ 0.01
VPS52-212ENST00000445902 ETNK1Q9HBU6 452 aa15.09■□□□□ 0.01
VPS52-212ENST00000445902 PALM3A6NDB9 673 aaPredicted RBP15.09■□□□□ 0.01
VPS52-212ENST00000445902 TMEM110-MUSTN1A8MSY1 372 aa15.09■□□□□ 0.01
VPS52-212ENST00000445902 DDX3YO15523 660 aaKnown RBP15.09■□□□□ 0.01
VPS52-212ENST00000445902 ACSL3O95573 720 aa15.09■□□□□ 0.01
VPS52-212ENST00000445902 TNNI2P48788 182 aa15.09■□□□□ 0.01
VPS52-212ENST00000445902 ZNF131P52739 623 aa15.09■□□□□ 0.01
VPS52-212ENST00000445902 ALG3Q92685 438 aa15.09■□□□□ 0.01
VPS52-212ENST00000445902 DDX23Q9BUQ8 820 aaKnown RBP15.09■□□□□ 0.01
VPS52-212ENST00000445902 PIDD1Q9HB75 910 aa15.09■□□□□ 0.01
VPS52-212ENST00000445902 ATP8A2Q9NTI2 1148 aa15.09■□□□□ 0.01
VPS52-212ENST00000445902 DNAJC17Q9NVM6 304 aaKnown RBP15.09■□□□□ 0.01
VPS52-212ENST00000445902 GRHL1Q9NZI5 618 aa15.09■□□□□ 0.01
VPS52-212ENST00000445902 SEC63Q9UGP8 760 aaKnown RBP15.09■□□□□ 0.01
VPS52-212ENST00000445902 SAP30BPQ9UHR5 308 aaKnown RBP15.09■□□□□ 0.01
VPS52-212ENST00000445902 COL22A1Q8NFW1 1626 aaPredicted RBP15.08■□□□□ 0.01
VPS52-212ENST00000445902 ANKRD63C9JTQ0 380 aa15.08■□□□□ 0
VPS52-212ENST00000445902 H0Y3Z8 333 aa15.08■□□□□ 0
VPS52-212ENST00000445902 CETN3O15182 167 aa15.08■□□□□ 0
VPS52-212ENST00000445902 KRT18P05783 430 aaKnown RBP15.08■□□□□ 0
VPS52-212ENST00000445902 TNIP1Q15025 636 aa15.08■□□□□ 0
VPS52-212ENST00000445902 RBBP5Q15291 538 aaKnown RBP15.08■□□□□ 0
VPS52-212ENST00000445902 SPATA21Q7Z572 469 aa15.08■□□□□ 0
VPS52-212ENST00000445902 COL23A1Q86Y22 540 aaPredicted RBP15.08■□□□□ 0
VPS52-212ENST00000445902 LNX1Q8TBB1 728 aaPredicted RBP15.08■□□□□ 0
VPS52-212ENST00000445902 IFT74Q96LB3 600 aa15.08■□□□□ 0
VPS52-212ENST00000445902 TMEM237Q96Q45 408 aa15.08■□□□□ 0
VPS52-212ENST00000445902 ATAD5Q96QE3 1844 aa15.08■□□□□ 0
VPS52-212ENST00000445902 CPSF2Q9P2I0 782 aaKnown RBP15.08■□□□□ 0
VPS52-212ENST00000445902 CHORDC1Q9UHD1 332 aaPredicted RBP15.08■□□□□ 0
VPS52-212ENST00000445902 SMIM24O75264 130 aa15.08■□□□□ 0
VPS52-212ENST00000445902 GNA14O95837 355 aa15.08■□□□□ 0
VPS52-212ENST00000445902 GNAT1P11488 350 aa15.08■□□□□ 0
VPS52-212ENST00000445902 ATF3P18847 181 aa15.08■□□□□ 0
VPS52-212ENST00000445902 FXR2P51116 673 aaKnown RBP eCLIP15.08■□□□□ 0
VPS52-212ENST00000445902 MAPK7Q13164 816 aa15.08■□□□□ 0
VPS52-212ENST00000445902 DPY19L2P1Q6NXN4 242 aa15.08■□□□□ 0
VPS52-212ENST00000445902 FAM43BQ6ZT52 329 aaPredicted RBP15.08■□□□□ 0
VPS52-212ENST00000445902 VPS36Q86VN1 386 aa15.08■□□□□ 0
VPS52-212ENST00000445902 SH3RF3Q8TEJ3 882 aaPredicted RBP15.08■□□□□ 0
VPS52-212ENST00000445902 KCTD10Q9H3F6 313 aa15.08■□□□□ 0
VPS52-212ENST00000445902 CCDC134Q9H6E4 229 aa15.08■□□□□ 0
VPS52-212ENST00000445902 HOMER3Q9NSC5 361 aa15.08■□□□□ 0
VPS52-212ENST00000445902 KIAA1024Q9UPX6 916 aa15.08■□□□□ 0
VPS52-212ENST00000445902 KIAA1551Q9HCM1 1747 aa15.08■□□□□ 0
VPS52-212ENST00000445902 A6NHS1 94 aa15.07■□□□□ 0
VPS52-212ENST00000445902 RIPK2O43353 540 aa15.07■□□□□ 0
VPS52-212ENST00000445902 PCK1P35558 622 aa15.07■□□□□ 0
VPS52-212ENST00000445902 MARCKSL1P49006 195 aa15.07■□□□□ 0
VPS52-212ENST00000445902 MGAT5Q09328 741 aa15.07■□□□□ 0
VPS52-212ENST00000445902 GPBP1Q86WP2 473 aa15.07■□□□□ 0
VPS52-212ENST00000445902 ZNF444Q8N0Y2 327 aaPredicted RBP15.07■□□□□ 0
VPS52-212ENST00000445902 ARHGEF2Q92974 986 aaKnown RBP15.07■□□□□ 0
VPS52-212ENST00000445902 ARHGEF26Q96DR7 871 aa15.07■□□□□ 0
VPS52-212ENST00000445902 CRAMP1Q96RY5 1269 aa15.07■□□□□ 0
VPS52-212ENST00000445902 RAB34Q9BZG1 259 aa15.07■□□□□ 0
VPS52-212ENST00000445902 ZCWPW1Q9H0M4 648 aa15.07■□□□□ 0
VPS52-212ENST00000445902 ARMCX3Q9UH62 379 aaPredicted RBP15.07■□□□□ 0
VPS52-212ENST00000445902 SHANK3Q9BYB0 1731 aa15.07■□□□□ 0
VPS52-212ENST00000445902 FRMPD2Q68DX3 1309 aaPredicted RBP15.07■□□□□ 0
VPS52-212ENST00000445902 IRF6O14896 467 aa15.07■□□□□ 0
VPS52-212ENST00000445902 EDIL3O43854 480 aa15.07■□□□□ 0
VPS52-212ENST00000445902 HIP1RO75146 1068 aa15.07■□□□□ 0
VPS52-212ENST00000445902 AFPP02771 609 aaKnown RBP15.07■□□□□ 0
VPS52-212ENST00000445902 TMEM119Q4V9L6 283 aa15.07■□□□□ 0
VPS52-212ENST00000445902 TAOK1Q7L7X3 1001 aa15.07■□□□□ 0
VPS52-212ENST00000445902 TBC1D16Q8TBP0 767 aa15.07■□□□□ 0
VPS52-212ENST00000445902 TSC22D3Q99576 134 aa15.07■□□□□ 0
VPS52-212ENST00000445902 LBHD1Q9BQE6 289 aaPredicted RBP15.07■□□□□ 0
VPS52-212ENST00000445902 BMP2KQ9NSY1 1161 aaPredicted RBP15.07■□□□□ 0
VPS52-212ENST00000445902 GCNT4Q9P109 453 aa15.07■□□□□ 0
VPS52-212ENST00000445902 ARL2BPQ9Y2Y0 163 aa15.07■□□□□ 0
VPS52-212ENST00000445902 BZW2Q9Y6E2 419 aaKnown RBP15.07■□□□□ 0
VPS52-212ENST00000445902 PECAM1P16284 738 aaPredicted RBP15.06■□□□□ 0
VPS52-212ENST00000445902 RAD23BP54727 409 aa15.06■□□□□ 0
VPS52-212ENST00000445902 MXRA7P84157 204 aa15.06■□□□□ 0
VPS52-212ENST00000445902 PLS1Q14651 629 aa15.06■□□□□ 0
VPS52-212ENST00000445902 UBE2SQ16763 222 aa15.06■□□□□ 0
VPS52-212ENST00000445902 ANO7Q6IWH7 933 aa15.06■□□□□ 0
VPS52-212ENST00000445902 SLC30A9Q6PML9 568 aa15.06■□□□□ 0
VPS52-212ENST00000445902 FAM47EQ6ZV65 393 aa15.06■□□□□ 0
VPS52-212ENST00000445902 C3orf67Q6ZVT6 689 aa15.06■□□□□ 0
VPS52-212ENST00000445902 ASRGL1Q7L266 308 aa15.06■□□□□ 0
VPS52-212ENST00000445902 UTP4Q969X6 686 aaKnown RBP15.06■□□□□ 0
VPS52-212ENST00000445902 POTEB3A0JP26 581 aa15.06■□□□□ 0
VPS52-212ENST00000445902 POTECB2RU33 542 aa15.06■□□□□ 0
VPS52-212ENST00000445902 LUC7L3O95232 432 aaKnown RBP15.06■□□□□ 0
VPS52-212ENST00000445902 KCNJ1P48048 391 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms