RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 FAM71BQ8TC56 605 aa11.46□□□□□ -0.57
TOP3B-210ENST00000444502 UBLCP1Q8WVY7 318 aaPredicted RBP11.46□□□□□ -0.57
TOP3B-210ENST00000444502 RPGRIP1Q96KN7 1286 aa11.46□□□□□ -0.57
TOP3B-210ENST00000444502 FAM20AQ96MK3 541 aa11.46□□□□□ -0.57
TOP3B-210ENST00000444502 KRT12Q99456 494 aa11.46□□□□□ -0.57
TOP3B-210ENST00000444502 MTRQ99707 1265 aa11.46□□□□□ -0.57
TOP3B-210ENST00000444502 HSD3B7Q9H2F3 369 aa11.46□□□□□ -0.57
TOP3B-210ENST00000444502 FAM184BQ9ULE4 1060 aa11.46□□□□□ -0.57
TOP3B-210ENST00000444502 PACSIN2Q9UNF0 486 aaPredicted RBP11.46□□□□□ -0.57
TOP3B-210ENST00000444502 ITIH6Q6UXX5 1313 aa11.46□□□□□ -0.57
TOP3B-210ENST00000444502 ESYT2A0FGR8 921 aa11.46□□□□□ -0.58
TOP3B-210ENST00000444502 ZRANB2O95218 330 aaKnown RBP eCLIP11.46□□□□□ -0.58
TOP3B-210ENST00000444502 TXNP10599 105 aaKnown RBP11.46□□□□□ -0.58
TOP3B-210ENST00000444502 HPDP32754 393 aaPredicted RBP11.46□□□□□ -0.58
TOP3B-210ENST00000444502 USP11P51784 963 aa11.46□□□□□ -0.58
TOP3B-210ENST00000444502 CASP8Q14790 479 aa11.46□□□□□ -0.58
TOP3B-210ENST00000444502 MICALCLQ6ZW33 695 aa11.46□□□□□ -0.58
TOP3B-210ENST00000444502 CCDC25Q86WR0 208 aa11.46□□□□□ -0.58
TOP3B-210ENST00000444502 ANKS1AQ92625 1134 aa11.46□□□□□ -0.58
TOP3B-210ENST00000444502 SHISA4Q96DD7 197 aa11.46□□□□□ -0.58
TOP3B-210ENST00000444502 RSRC1Q96IZ7 334 aaKnown RBP11.46□□□□□ -0.58
TOP3B-210ENST00000444502 SEMA6BQ9H3T3 888 aa11.46□□□□□ -0.58
TOP3B-210ENST00000444502 G3BP2Q9UN86 482 aaKnown RBP11.46□□□□□ -0.58
TOP3B-210ENST00000444502 EIF4E1BA6NMX2 242 aaKnown RBP11.46□□□□□ -0.58
TOP3B-210ENST00000444502 NMT1P30419 496 aaKnown RBP11.46□□□□□ -0.58
TOP3B-210ENST00000444502 QARSP47897 775 aaKnown RBP11.46□□□□□ -0.58
TOP3B-210ENST00000444502 SNAPC2Q13487 334 aa11.46□□□□□ -0.58
TOP3B-210ENST00000444502 RBBP5Q15291 538 aaKnown RBP11.46□□□□□ -0.58
TOP3B-210ENST00000444502 NPY5RQ15761 445 aa11.46□□□□□ -0.58
TOP3B-210ENST00000444502 SHROOM1Q2M3G4 852 aaPredicted RBP11.46□□□□□ -0.58
TOP3B-210ENST00000444502 PNMA8AQ86V59 439 aaPredicted RBP11.46□□□□□ -0.58
TOP3B-210ENST00000444502 IFT20Q8IY31 132 aa11.46□□□□□ -0.58
TOP3B-210ENST00000444502 SPATA33Q96N06 139 aa11.46□□□□□ -0.58
TOP3B-210ENST00000444502 EIF2AK1Q9BQI3 630 aaKnown RBP11.46□□□□□ -0.58
TOP3B-210ENST00000444502 FUT8Q9BYC5 575 aa11.46□□□□□ -0.58
TOP3B-210ENST00000444502 RRAGCQ9HB90 399 aa11.46□□□□□ -0.58
TOP3B-210ENST00000444502 NUB1Q9Y5A7 615 aa11.46□□□□□ -0.58
TOP3B-210ENST00000444502 C19orf81C9J6K1 198 aa11.45□□□□□ -0.58
TOP3B-210ENST00000444502 CAND2O75155 1236 aa11.45□□□□□ -0.58
TOP3B-210ENST00000444502 ACTN1P12814 892 aa11.45□□□□□ -0.58
TOP3B-210ENST00000444502 SLC8A3P57103 927 aa11.45□□□□□ -0.58
TOP3B-210ENST00000444502 VSNL1P62760 191 aa11.45□□□□□ -0.58
TOP3B-210ENST00000444502 MOB2Q70IA6 237 aa11.45□□□□□ -0.58
TOP3B-210ENST00000444502 KCNK18Q7Z418 384 aa11.45□□□□□ -0.58
TOP3B-210ENST00000444502 CEP120Q8N960 986 aa11.45□□□□□ -0.58
TOP3B-210ENST00000444502 NOA1Q8NC60 698 aaKnown RBP11.45□□□□□ -0.58
TOP3B-210ENST00000444502 SMARCAL1Q9NZC9 954 aa11.45□□□□□ -0.58
TOP3B-210ENST00000444502 GGPS1O95749 300 aa11.45□□□□□ -0.58
TOP3B-210ENST00000444502 NR3C1P04150 777 aa11.45□□□□□ -0.58
TOP3B-210ENST00000444502 PSMC2P35998 433 aaKnown RBP11.45□□□□□ -0.58
TOP3B-210ENST00000444502 ATP1A2P50993 1020 aa11.45□□□□□ -0.58
TOP3B-210ENST00000444502 KSR1Q8IVT5 923 aa11.45□□□□□ -0.58
TOP3B-210ENST00000444502 MSANTD4Q8NCY6 345 aa11.45□□□□□ -0.58
TOP3B-210ENST00000444502 RIN2Q8WYP3 895 aaPredicted RBP11.45□□□□□ -0.58
TOP3B-210ENST00000444502 RNF34Q969K3 372 aa11.45□□□□□ -0.58
TOP3B-210ENST00000444502 TBC1D22BQ9NU19 505 aa11.45□□□□□ -0.58
TOP3B-210ENST00000444502 SERPING1P05155 500 aa11.45□□□□□ -0.58
TOP3B-210ENST00000444502 PGK2P07205 417 aa11.45□□□□□ -0.58
TOP3B-210ENST00000444502 FXR2P51116 673 aaKnown RBP eCLIP11.45□□□□□ -0.58
TOP3B-210ENST00000444502 ORC2Q13416 577 aaPredicted RBP11.45□□□□□ -0.58
TOP3B-210ENST00000444502 ALKBH5Q6P6C2 394 aaKnown RBP11.45□□□□□ -0.58
TOP3B-210ENST00000444502 GLIS3Q8NEA6 775 aa11.45□□□□□ -0.58
TOP3B-210ENST00000444502 PSMD1Q99460 953 aa11.45□□□□□ -0.58
TOP3B-210ENST00000444502 LACRTQ9GZZ8 138 aa11.45□□□□□ -0.58
TOP3B-210ENST00000444502 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.45□□□□□ -0.58
TOP3B-210ENST00000444502 ABL1P00519 1130 aa11.44□□□□□ -0.58
TOP3B-210ENST00000444502 TNNC2P02585 160 aa11.44□□□□□ -0.58
TOP3B-210ENST00000444502 SMARCA1P28370 1054 aa11.44□□□□□ -0.58
TOP3B-210ENST00000444502 KNOP1Q1ED39 458 aaKnown RBP11.44□□□□□ -0.58
TOP3B-210ENST00000444502 SUGP1Q8IWZ8 645 aaKnown RBP11.44□□□□□ -0.58
TOP3B-210ENST00000444502 KIAA0895Q8NCT3 520 aa11.44□□□□□ -0.58
TOP3B-210ENST00000444502 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.44□□□□□ -0.58
TOP3B-210ENST00000444502 ACCSQ96QU6 501 aa11.44□□□□□ -0.58
TOP3B-210ENST00000444502 TRIM49P0CI25 452 aa11.44□□□□□ -0.58
TOP3B-210ENST00000444502 TRIM49CP0CI26 452 aa11.44□□□□□ -0.58
TOP3B-210ENST00000444502 GAP43P17677 238 aa11.44□□□□□ -0.58
TOP3B-210ENST00000444502 CD58P19256 250 aa11.44□□□□□ -0.58
TOP3B-210ENST00000444502 KRT76Q01546 638 aa11.44□□□□□ -0.58
TOP3B-210ENST00000444502 TFDP1Q14186 410 aa11.44□□□□□ -0.58
TOP3B-210ENST00000444502 SPDYE2Q495Y8 402 aa11.44□□□□□ -0.58
TOP3B-210ENST00000444502 RHPN2Q8IUC4 686 aa11.44□□□□□ -0.58
TOP3B-210ENST00000444502 CYP2W1Q8TAV3 490 aa11.44□□□□□ -0.58
TOP3B-210ENST00000444502 DYDC1Q8WWB3 177 aa11.44□□□□□ -0.58
TOP3B-210ENST00000444502 FAM163AQ96GL9 167 aaPredicted RBP11.44□□□□□ -0.58
TOP3B-210ENST00000444502 PNMA5Q96PV4 448 aa11.44□□□□□ -0.58
TOP3B-210ENST00000444502 TAAR1Q96RJ0 339 aa11.44□□□□□ -0.58
TOP3B-210ENST00000444502 DUSP9Q99956 384 aaKnown RBP11.44□□□□□ -0.58
TOP3B-210ENST00000444502 REEP2Q9BRK0 252 aa11.44□□□□□ -0.58
TOP3B-210ENST00000444502 DPH5Q9H2P9 285 aa11.44□□□□□ -0.58
TOP3B-210ENST00000444502 FAM198AQ9UFP1 575 aa11.44□□□□□ -0.58
TOP3B-210ENST00000444502 BAIAP2L1Q9UHR4 511 aa11.44□□□□□ -0.58
TOP3B-210ENST00000444502 AMFRQ9UKV5 643 aa11.44□□□□□ -0.58
TOP3B-210ENST00000444502 RNF225M0QZC1 329 aaPredicted RBP11.44□□□□□ -0.58
TOP3B-210ENST00000444502 NFIBO00712 420 aa11.44□□□□□ -0.58
TOP3B-210ENST00000444502 IRF6O14896 467 aa11.44□□□□□ -0.58
TOP3B-210ENST00000444502 RGL2O15211 777 aa11.44□□□□□ -0.58
TOP3B-210ENST00000444502 MED24O75448 989 aa11.44□□□□□ -0.58
TOP3B-210ENST00000444502 PALMO75781 387 aa11.44□□□□□ -0.58
TOP3B-210ENST00000444502 VCAM1P19320 739 aa11.44□□□□□ -0.58
TOP3B-210ENST00000444502 PIK3CAP42336 1068 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms