RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 XKR9Q5GH70 373 aa19.73■□□□□ 0.75
CCDC188-201ENST00000439765 POTEGQ6S5H5 508 aa19.73■□□□□ 0.75
CCDC188-201ENST00000439765 TSHZ1Q6ZSZ6 1077 aa19.73■□□□□ 0.75
CCDC188-201ENST00000439765 NME8Q8N427 588 aa19.73■□□□□ 0.75
CCDC188-201ENST00000439765 ZNF668Q96K58 619 aaPredicted RBP19.73■□□□□ 0.75
CCDC188-201ENST00000439765 CCDC43Q96MW1 224 aaKnown RBP19.73■□□□□ 0.75
CCDC188-201ENST00000439765 RAD9AQ99638 391 aa19.73■□□□□ 0.75
CCDC188-201ENST00000439765 OSMRQ99650 979 aa19.73■□□□□ 0.75
CCDC188-201ENST00000439765 CERS4Q9HA82 394 aa19.73■□□□□ 0.75
CCDC188-201ENST00000439765 CDHR5Q9HBB8 845 aa19.73■□□□□ 0.75
CCDC188-201ENST00000439765 ATP6V1DQ9Y5K8 247 aa19.73■□□□□ 0.75
CCDC188-201ENST00000439765 KDM3AQ9Y4C1 1321 aa19.73■□□□□ 0.75
CCDC188-201ENST00000439765 PP2D1A8MPX8 630 aa19.73■□□□□ 0.75
CCDC188-201ENST00000439765 SPATA31C1P0DKV0 1188 aa19.73■□□□□ 0.75
CCDC188-201ENST00000439765 PRPHP41219 470 aa19.73■□□□□ 0.75
CCDC188-201ENST00000439765 POLGP54098 1239 aaPredicted RBP19.73■□□□□ 0.75
CCDC188-201ENST00000439765 CCDC85BQ15834 202 aaPredicted RBP19.73■□□□□ 0.75
CCDC188-201ENST00000439765 HAUS3Q68CZ6 603 aa19.73■□□□□ 0.75
CCDC188-201ENST00000439765 FAM173BQ6P4H8 233 aa19.73■□□□□ 0.75
CCDC188-201ENST00000439765 OTUD6AQ7L8S5 288 aa19.73■□□□□ 0.75
CCDC188-201ENST00000439765 CATSPER3Q86XQ3 398 aa19.73■□□□□ 0.75
CCDC188-201ENST00000439765 PIGOQ8TEQ8 1089 aa19.73■□□□□ 0.75
CCDC188-201ENST00000439765 SLC7A3Q8WY07 619 aa19.73■□□□□ 0.75
CCDC188-201ENST00000439765 ARNTL2Q8WYA1 636 aa19.73■□□□□ 0.75
CCDC188-201ENST00000439765 SCLT1Q96NL6 688 aa19.73■□□□□ 0.75
CCDC188-201ENST00000439765 ZBED2Q9BTP6 218 aa19.73■□□□□ 0.75
CCDC188-201ENST00000439765 RAB34Q9BZG1 259 aa19.73■□□□□ 0.75
CCDC188-201ENST00000439765 AGO3Q9H9G7 860 aaKnown RBP19.73■□□□□ 0.75
CCDC188-201ENST00000439765 TUFT1Q9NNX1 390 aa19.73■□□□□ 0.75
CCDC188-201ENST00000439765 LRWD1Q9UFC0 647 aa19.73■□□□□ 0.75
CCDC188-201ENST00000439765 MTCH2Q9Y6C9 303 aa19.73■□□□□ 0.75
CCDC188-201ENST00000439765 TCHHQ07283 1943 aa19.72■□□□□ 0.75
CCDC188-201ENST00000439765 MYO7AQ13402 2215 aa19.72■□□□□ 0.75
CCDC188-201ENST00000439765 RFXAPO00287 272 aa19.72■□□□□ 0.75
CCDC188-201ENST00000439765 GTPBP6O43824 516 aaPredicted RBP19.72■□□□□ 0.75
CCDC188-201ENST00000439765 LYPLA2O95372 231 aa19.72■□□□□ 0.75
CCDC188-201ENST00000439765 CD52P31358 61 aa19.72■□□□□ 0.75
CCDC188-201ENST00000439765 DTHD1Q6ZMT9 781 aa19.72■□□□□ 0.75
CCDC188-201ENST00000439765 IGSF22Q8N9C0 903 aa19.72■□□□□ 0.75
CCDC188-201ENST00000439765 TMEM40Q8WWA1 233 aa19.72■□□□□ 0.75
CCDC188-201ENST00000439765 IGKV6-21A0A0C4DH24 114 aa19.71■□□□□ 0.75
CCDC188-201ENST00000439765 VWA3AA6NCI4 1184 aa19.71■□□□□ 0.75
CCDC188-201ENST00000439765 MAFO75444 373 aaPredicted RBP19.71■□□□□ 0.75
CCDC188-201ENST00000439765 CCT6AP40227 531 aaKnown RBP19.71■□□□□ 0.75
CCDC188-201ENST00000439765 NLRP11P59045 1033 aaKnown RBP19.71■□□□□ 0.75
CCDC188-201ENST00000439765 PAK2Q13177 524 aa19.71■□□□□ 0.75
CCDC188-201ENST00000439765 EMC2Q15006 297 aa19.71■□□□□ 0.75
CCDC188-201ENST00000439765 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.71■□□□□ 0.75
CCDC188-201ENST00000439765 SPRED2Q7Z698 418 aa19.71■□□□□ 0.75
CCDC188-201ENST00000439765 SNX29Q8TEQ0 813 aa19.71■□□□□ 0.75
CCDC188-201ENST00000439765 APBB2Q92870 758 aa19.71■□□□□ 0.75
CCDC188-201ENST00000439765 POLR3CQ9BUI4 534 aaPredicted RBP19.71■□□□□ 0.75
CCDC188-201ENST00000439765 ATG2AQ2TAZ0 1938 aa19.71■□□□□ 0.75
CCDC188-201ENST00000439765 LPXNO60711 386 aa19.7■□□□□ 0.74
CCDC188-201ENST00000439765 GPR32O75388 356 aa19.7■□□□□ 0.74
CCDC188-201ENST00000439765 AMHP03971 560 aa19.7■□□□□ 0.74
CCDC188-201ENST00000439765 RPA1P27694 616 aa19.7■□□□□ 0.74
CCDC188-201ENST00000439765 CDC25AP30304 524 aa19.7■□□□□ 0.74
CCDC188-201ENST00000439765 RFC5P40937 340 aa19.7■□□□□ 0.74
CCDC188-201ENST00000439765 SF3A1Q15459 793 aaKnown RBP19.7■□□□□ 0.74
CCDC188-201ENST00000439765 FOXD4L6Q3SYB3 417 aaPredicted RBP19.7■□□□□ 0.74
CCDC188-201ENST00000439765 FOXD4L3Q6VB84 417 aaPredicted RBP19.7■□□□□ 0.74
CCDC188-201ENST00000439765 DHX33Q9H6R0 707 aaKnown RBP19.7■□□□□ 0.74
CCDC188-201ENST00000439765 BDP1A6H8Y1 2624 aa19.7■□□□□ 0.74
CCDC188-201ENST00000439765 MUC3AQ02505 3323 aa19.69■□□□□ 0.74
CCDC188-201ENST00000439765 LINC01553A4QN01 128 aa19.69■□□□□ 0.74
CCDC188-201ENST00000439765 RARRES1P49788 294 aa19.69■□□□□ 0.74
CCDC188-201ENST00000439765 DNM2P50570 870 aa19.69■□□□□ 0.74
CCDC188-201ENST00000439765 GPC3P51654 580 aa19.69■□□□□ 0.74
CCDC188-201ENST00000439765 CRYBB1P53674 252 aaPredicted RBP19.69■□□□□ 0.74
CCDC188-201ENST00000439765 HTRA4P83105 476 aaPredicted RBP19.69■□□□□ 0.74
CCDC188-201ENST00000439765 GRB10Q13322 594 aa19.69■□□□□ 0.74
CCDC188-201ENST00000439765 FAM117BQ6P1L5 589 aa19.69■□□□□ 0.74
CCDC188-201ENST00000439765 RHPN2Q8IUC4 686 aa19.69■□□□□ 0.74
CCDC188-201ENST00000439765 MYOCDQ8IZQ8 938 aa19.69■□□□□ 0.74
CCDC188-201ENST00000439765 NLRP7Q8WX94 980 aa19.69■□□□□ 0.74
CCDC188-201ENST00000439765 TMEM143Q96AN5 459 aa19.69■□□□□ 0.74
CCDC188-201ENST00000439765 ASB2Q96Q27 587 aa19.69■□□□□ 0.74
CCDC188-201ENST00000439765 JPH2Q9BR39 696 aaPredicted RBP19.69■□□□□ 0.74
CCDC188-201ENST00000439765 TSPYL2Q9H2G4 693 aaPredicted RBP19.69■□□□□ 0.74
CCDC188-201ENST00000439765 ANKEF1Q9NU02 776 aa19.69■□□□□ 0.74
CCDC188-201ENST00000439765 SUCLA2Q9P2R7 463 aaPredicted RBP19.69■□□□□ 0.74
CCDC188-201ENST00000439765 PADI3Q9ULW8 664 aa19.69■□□□□ 0.74
CCDC188-201ENST00000439765 NOC2LQ9Y3T9 749 aaKnown RBP19.69■□□□□ 0.74
CCDC188-201ENST00000439765 PPME1Q9Y570 386 aa19.69■□□□□ 0.74
CCDC188-201ENST00000439765 INSL6Q9Y581 213 aa19.69■□□□□ 0.74
CCDC188-201ENST00000439765 CLIC4Q9Y696 253 aa19.69■□□□□ 0.74
CCDC188-201ENST00000439765 SQORQ9Y6N5 450 aa19.69■□□□□ 0.74
CCDC188-201ENST00000439765 USO1O60763 962 aaKnown RBP19.68■□□□□ 0.74
CCDC188-201ENST00000439765 RPS6KA5O75582 802 aa19.68■□□□□ 0.74
CCDC188-201ENST00000439765 ERVK-21P61565 698 aa19.68■□□□□ 0.74
CCDC188-201ENST00000439765 CEBPZQ03701 1054 aaKnown RBP19.68■□□□□ 0.74
CCDC188-201ENST00000439765 DNM1Q05193 864 aaKnown RBP19.68■□□□□ 0.74
CCDC188-201ENST00000439765 NFX1Q12986 1120 aaKnown RBP19.68■□□□□ 0.74
CCDC188-201ENST00000439765 PDIA5Q14554 519 aa19.68■□□□□ 0.74
CCDC188-201ENST00000439765 ECM1Q16610 540 aa19.68■□□□□ 0.74
CCDC188-201ENST00000439765 ARL6IP4Q66PJ3 421 aaKnown RBP19.68■□□□□ 0.74
CCDC188-201ENST00000439765 ATL3Q6DD88 541 aa19.68■□□□□ 0.74
CCDC188-201ENST00000439765 KSR1Q8IVT5 923 aa19.68■□□□□ 0.74
CCDC188-201ENST00000439765 MICALL1Q8N3F8 863 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms