RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 COL9A1P20849 921 aa20.73■□□□□ 0.91
AC004540.1-201ENST00000439120 AK2P54819 239 aa20.73■□□□□ 0.91
AC004540.1-201ENST00000439120 CDC42EP1Q00587 391 aa20.73■□□□□ 0.91
AC004540.1-201ENST00000439120 COL19A1Q14993 1142 aa20.73■□□□□ 0.91
AC004540.1-201ENST00000439120 PIK3AP1Q6ZUJ8 805 aa20.73■□□□□ 0.91
AC004540.1-201ENST00000439120 GJD3Q8N144 294 aa20.73■□□□□ 0.91
AC004540.1-201ENST00000439120 NIFKQ9BYG3 293 aaKnown RBP20.73■□□□□ 0.91
AC004540.1-201ENST00000439120 DKC1O60832 514 aaKnown RBP eCLIP20.72■□□□□ 0.91
AC004540.1-201ENST00000439120 DARSP14868 501 aaKnown RBP20.72■□□□□ 0.91
AC004540.1-201ENST00000439120 PSMC5P62195 406 aa20.72■□□□□ 0.91
AC004540.1-201ENST00000439120 DSC3Q14574 896 aa20.72■□□□□ 0.91
AC004540.1-201ENST00000439120 TARBP2Q15633 366 aaKnown RBP20.72■□□□□ 0.91
AC004540.1-201ENST00000439120 CSPP1Q1MSJ5 1256 aa20.72■□□□□ 0.91
AC004540.1-201ENST00000439120 PPP4R3AQ6IN85 833 aa20.72■□□□□ 0.91
AC004540.1-201ENST00000439120 B3GNT9Q6UX72 402 aa20.72■□□□□ 0.91
AC004540.1-201ENST00000439120 THNSL1Q8IYQ7 743 aa20.72■□□□□ 0.91
AC004540.1-201ENST00000439120 RNF169Q8NCN4 708 aa20.72■□□□□ 0.91
AC004540.1-201ENST00000439120 MICAL1Q8TDZ2 1067 aa20.72■□□□□ 0.91
AC004540.1-201ENST00000439120 FAM20AQ96MK3 541 aa20.72■□□□□ 0.91
AC004540.1-201ENST00000439120 GCOM2Q9BZD3 368 aaPredicted RBP20.72■□□□□ 0.91
AC004540.1-201ENST00000439120 TMEM150BA6NC51 233 aa20.71■□□□□ 0.91
AC004540.1-201ENST00000439120 LAG3P18627 525 aa20.71■□□□□ 0.91
AC004540.1-201ENST00000439120 DNAJB1P25685 340 aa20.71■□□□□ 0.91
AC004540.1-201ENST00000439120 NDUFV1P49821 464 aa20.71■□□□□ 0.91
AC004540.1-201ENST00000439120 FAM189BP81408 668 aa20.71■□□□□ 0.91
AC004540.1-201ENST00000439120 PPP2R5CQ13362 524 aa20.71■□□□□ 0.91
AC004540.1-201ENST00000439120 CAMK1Q14012 370 aa20.71■□□□□ 0.91
AC004540.1-201ENST00000439120 CLUL1Q15846 466 aa20.71■□□□□ 0.91
AC004540.1-201ENST00000439120 JPH2Q9BR39 696 aaPredicted RBP20.71■□□□□ 0.91
AC004540.1-201ENST00000439120 SH2D3AQ9BRG2 576 aa20.71■□□□□ 0.91
AC004540.1-201ENST00000439120 TMEM117Q9H0C3 514 aa20.71■□□□□ 0.91
AC004540.1-201ENST00000439120 EPHX3Q9H6B9 360 aa20.71■□□□□ 0.91
AC004540.1-201ENST00000439120 GJB4Q9NTQ9 266 aa20.71■□□□□ 0.91
AC004540.1-201ENST00000439120 TYW1Q9NV66 732 aaKnown RBP20.71■□□□□ 0.91
AC004540.1-201ENST00000439120 PLXNA4Q9HCM2 1894 aa20.71■□□□□ 0.91
AC004540.1-201ENST00000439120 DTNBO60941 627 aa20.7■□□□□ 0.9
AC004540.1-201ENST00000439120 KRT2P35908 639 aa20.7■□□□□ 0.9
AC004540.1-201ENST00000439120 QARSP47897 775 aaKnown RBP20.7■□□□□ 0.9
AC004540.1-201ENST00000439120 UBE3AQ05086 875 aa20.7■□□□□ 0.9
AC004540.1-201ENST00000439120 CTC1Q2NKJ3 1217 aa20.7■□□□□ 0.9
AC004540.1-201ENST00000439120 NECAB1Q8N987 351 aa20.7■□□□□ 0.9
AC004540.1-201ENST00000439120 COLGALT1Q8NBJ5 622 aa20.7■□□□□ 0.9
AC004540.1-201ENST00000439120 OXER1Q8TDS5 423 aa20.7■□□□□ 0.9
AC004540.1-201ENST00000439120 KCNMB3Q9NPA1 279 aa20.7■□□□□ 0.9
AC004540.1-201ENST00000439120 DACT1Q9NYF0 836 aa20.7■□□□□ 0.9
AC004540.1-201ENST00000439120 MYO7AQ13402 2215 aa20.7■□□□□ 0.9
AC004540.1-201ENST00000439120 TBX3O15119 743 aa20.69■□□□□ 0.9
AC004540.1-201ENST00000439120 FGF18O76093 207 aa20.69■□□□□ 0.9
AC004540.1-201ENST00000439120 BAG4O95429 457 aaKnown RBP20.69■□□□□ 0.9
AC004540.1-201ENST00000439120 CTDNEP1O95476 244 aa20.69■□□□□ 0.9
AC004540.1-201ENST00000439120 FGFR4P22455 802 aa20.69■□□□□ 0.9
AC004540.1-201ENST00000439120 SFPQP23246 707 aaKnown RBP eCLIP20.69■□□□□ 0.9
AC004540.1-201ENST00000439120 GTF2F1P35269 517 aaKnown RBP eCLIP20.69■□□□□ 0.9
AC004540.1-201ENST00000439120 IRS1P35568 1242 aa20.69■□□□□ 0.9
AC004540.1-201ENST00000439120 LTBRP36941 435 aa20.69■□□□□ 0.9
AC004540.1-201ENST00000439120 NRIP1P48552 1158 aa20.69■□□□□ 0.9
AC004540.1-201ENST00000439120 DRP2Q13474 957 aa20.69■□□□□ 0.9
AC004540.1-201ENST00000439120 ECHDC2Q86YB7 292 aa20.69■□□□□ 0.9
AC004540.1-201ENST00000439120 RHPN2Q8IUC4 686 aa20.69■□□□□ 0.9
AC004540.1-201ENST00000439120 LRRC43Q8N309 656 aa20.69■□□□□ 0.9
AC004540.1-201ENST00000439120 INO80BQ9C086 356 aaPredicted RBP20.69■□□□□ 0.9
AC004540.1-201ENST00000439120 CD320Q9NPF0 282 aa20.69■□□□□ 0.9
AC004540.1-201ENST00000439120 TLR9Q9NR96 1032 aa20.69■□□□□ 0.9
AC004540.1-201ENST00000439120 SUCLA2Q9P2R7 463 aaPredicted RBP20.69■□□□□ 0.9
AC004540.1-201ENST00000439120 PRKAG3Q9UGI9 489 aa20.69■□□□□ 0.9
AC004540.1-201ENST00000439120 VAV3Q9UKW4 847 aa20.69■□□□□ 0.9
AC004540.1-201ENST00000439120 EML1O00423 815 aa20.68■□□□□ 0.9
AC004540.1-201ENST00000439120 LINC01565O15544 149 aa20.68■□□□□ 0.9
AC004540.1-201ENST00000439120 MAFO75444 373 aaPredicted RBP20.68■□□□□ 0.9
AC004540.1-201ENST00000439120 CSDE1O75534 798 aaKnown RBP20.68■□□□□ 0.9
AC004540.1-201ENST00000439120 NEK4P51957 841 aa20.68■□□□□ 0.9
AC004540.1-201ENST00000439120 DLX2Q07687 328 aaPredicted RBP20.68■□□□□ 0.9
AC004540.1-201ENST00000439120 ADAM15Q13444 863 aa20.68■□□□□ 0.9
AC004540.1-201ENST00000439120 TRIM29Q14134 588 aa20.68■□□□□ 0.9
AC004540.1-201ENST00000439120 ME3Q16798 604 aa20.68■□□□□ 0.9
AC004540.1-201ENST00000439120 PLA2G4FQ68DD2 849 aa20.68■□□□□ 0.9
AC004540.1-201ENST00000439120 ANO5Q75V66 913 aa20.68■□□□□ 0.9
AC004540.1-201ENST00000439120 ADGRD2Q7Z7M1 963 aa20.68■□□□□ 0.9
AC004540.1-201ENST00000439120 RBM23Q86U06 439 aaKnown RBP20.68■□□□□ 0.9
AC004540.1-201ENST00000439120 ZNF410Q86VK4 478 aa20.68■□□□□ 0.9
AC004540.1-201ENST00000439120 EXOC8Q8IYI6 725 aa20.68■□□□□ 0.9
AC004540.1-201ENST00000439120 SLFN12Q8IYM2 578 aa20.68■□□□□ 0.9
AC004540.1-201ENST00000439120 SLC7A3Q8WY07 619 aa20.68■□□□□ 0.9
AC004540.1-201ENST00000439120 GTF3C6Q969F1 213 aa20.68■□□□□ 0.9
AC004540.1-201ENST00000439120 NLRP4Q96MN2 994 aa20.68■□□□□ 0.9
AC004540.1-201ENST00000439120 TLE6Q9H808 572 aa20.68■□□□□ 0.9
AC004540.1-201ENST00000439120 HCSTQ9UBK5 93 aa20.68■□□□□ 0.9
AC004540.1-201ENST00000439120 PUF60Q9UHX1 559 aaKnown RBP20.68■□□□□ 0.9
AC004540.1-201ENST00000439120 CD207Q9UJ71 328 aa20.68■□□□□ 0.9
AC004540.1-201ENST00000439120 A0A087WZ62 844 aa20.67■□□□□ 0.9
AC004540.1-201ENST00000439120 IGKV6-21A0A0C4DH24 114 aa20.67■□□□□ 0.9
AC004540.1-201ENST00000439120 TBX10O75333 385 aa20.67■□□□□ 0.9
AC004540.1-201ENST00000439120 STBD1O95210 358 aa20.67■□□□□ 0.9
AC004540.1-201ENST00000439120 P4HBP07237 508 aaKnown RBP20.67■□□□□ 0.9
AC004540.1-201ENST00000439120 POLGP54098 1239 aaPredicted RBP20.67■□□□□ 0.9
AC004540.1-201ENST00000439120 SMAD4Q13485 552 aaKnown RBP20.67■□□□□ 0.9
AC004540.1-201ENST00000439120 TMEM31Q5JXX7 168 aa20.67■□□□□ 0.9
AC004540.1-201ENST00000439120 NCAPH2Q6IBW4 605 aa20.67■□□□□ 0.9
AC004540.1-201ENST00000439120 POTEDQ86YR6 584 aa20.67■□□□□ 0.9
AC004540.1-201ENST00000439120 EFHBQ8N7U6 833 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms