RNA–Protein interactions for RNA: ENST00000434755.5

NOD1-206, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 4,610 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-206ENST00000434755 ZKSCAN4Q969J2 545 aaPredicted RBP11.52□□□□□ -0.57
NOD1-206ENST00000434755 CCDC77Q9BR77 488 aa11.52□□□□□ -0.57
NOD1-206ENST00000434755 POLR3CQ9BUI4 534 aaPredicted RBP11.52□□□□□ -0.57
NOD1-206ENST00000434755 IQCGQ9H095 443 aaKnown RBP11.52□□□□□ -0.57
NOD1-206ENST00000434755 FBXO28Q9NVF7 368 aa11.52□□□□□ -0.57
NOD1-206ENST00000434755 PARP2Q9UGN5 583 aa11.52□□□□□ -0.57
NOD1-206ENST00000434755 TRIM49BA6NDI0 452 aa11.52□□□□□ -0.57
NOD1-206ENST00000434755 GFPT2O94808 682 aa11.52□□□□□ -0.57
NOD1-206ENST00000434755 APBA1Q02410 837 aa11.52□□□□□ -0.57
NOD1-206ENST00000434755 UAP1Q16222 522 aaPredicted RBP11.52□□□□□ -0.57
NOD1-206ENST00000434755 NAA35Q5VZE5 725 aa11.52□□□□□ -0.57
NOD1-206ENST00000434755 ZNF746Q6NUN9 644 aaPredicted RBP11.52□□□□□ -0.57
NOD1-206ENST00000434755 USP49Q70CQ1 688 aa11.52□□□□□ -0.57
NOD1-206ENST00000434755 TAB3Q8N5C8 712 aaPredicted RBP11.52□□□□□ -0.57
NOD1-206ENST00000434755 UBLCP1Q8WVY7 318 aaPredicted RBP11.52□□□□□ -0.57
NOD1-206ENST00000434755 NUDT12Q9BQG2 462 aa11.52□□□□□ -0.57
NOD1-206ENST00000434755 KCNQ5Q9NR82 932 aa11.52□□□□□ -0.57
NOD1-206ENST00000434755 ASIC3Q9UHC3 531 aa11.52□□□□□ -0.57
NOD1-206ENST00000434755 AMFRQ9UKV5 643 aa11.52□□□□□ -0.57
NOD1-206ENST00000434755 UBR2Q8IWV8 1755 aa11.52□□□□□ -0.57
NOD1-206ENST00000434755 SYNJ2BP-COX16A0A087WUM0 186 aa11.52□□□□□ -0.57
NOD1-206ENST00000434755 EIF3CLB5ME19 914 aaKnown RBP11.52□□□□□ -0.57
NOD1-206ENST00000434755 GH1P01241 217 aa11.52□□□□□ -0.57
NOD1-206ENST00000434755 PTPRAP18433 802 aa11.52□□□□□ -0.57
NOD1-206ENST00000434755 LACTBP83111 547 aaPredicted RBP11.52□□□□□ -0.57
NOD1-206ENST00000434755 CYP27A1Q02318 531 aa11.52□□□□□ -0.57
NOD1-206ENST00000434755 PHLDB2Q86SQ0 1253 aa11.52□□□□□ -0.57
NOD1-206ENST00000434755 EIF3CQ99613 913 aaKnown RBP11.52□□□□□ -0.57
NOD1-206ENST00000434755 ANKEF1Q9NU02 776 aa11.52□□□□□ -0.57
NOD1-206ENST00000434755 COX16Q9P0S2 106 aa11.52□□□□□ -0.57
NOD1-206ENST00000434755 YDJCA8MPS7 323 aa11.51□□□□□ -0.57
NOD1-206ENST00000434755 MAGEB2O15479 319 aa11.51□□□□□ -0.57
NOD1-206ENST00000434755 RPA1P27694 616 aa11.51□□□□□ -0.57
NOD1-206ENST00000434755 MFAP3P55082 362 aa11.51□□□□□ -0.57
NOD1-206ENST00000434755 MYL7Q01449 175 aa11.51□□□□□ -0.57
NOD1-206ENST00000434755 TNFAIP2Q03169 654 aa11.51□□□□□ -0.57
NOD1-206ENST00000434755 MTMR3Q13615 1198 aa11.51□□□□□ -0.57
NOD1-206ENST00000434755 C7orf31Q8N865 590 aa11.51□□□□□ -0.57
NOD1-206ENST00000434755 RUBCNQ92622 972 aa11.51□□□□□ -0.57
NOD1-206ENST00000434755 SMARCAD1Q9H4L7 1026 aa11.51□□□□□ -0.57
NOD1-206ENST00000434755 NHEJ1Q9H9Q4 299 aaPredicted RBP11.51□□□□□ -0.57
NOD1-206ENST00000434755 KCND1Q9NSA2 647 aa11.51□□□□□ -0.57
NOD1-206ENST00000434755 KCNH4Q9UQ05 1017 aa11.51□□□□□ -0.57
NOD1-206ENST00000434755 CCDC151A5D8V7 595 aa11.51□□□□□ -0.57
NOD1-206ENST00000434755 HSPA6P17066 643 aa11.51□□□□□ -0.57
NOD1-206ENST00000434755 GRIK5Q16478 980 aa11.51□□□□□ -0.57
NOD1-206ENST00000434755 FIGNQ5HY92 759 aa11.51□□□□□ -0.57
NOD1-206ENST00000434755 CHADLQ6NUI6 762 aa11.51□□□□□ -0.57
NOD1-206ENST00000434755 PADI6Q6TGC4 694 aa11.51□□□□□ -0.57
NOD1-206ENST00000434755 PPP1R21Q6ZMI0 780 aa11.51□□□□□ -0.57
NOD1-206ENST00000434755 SMC1BQ8NDV3 1235 aa11.51□□□□□ -0.57
NOD1-206ENST00000434755 PSPC1Q8WXF1 523 aaKnown RBP11.51□□□□□ -0.57
NOD1-206ENST00000434755 EIF2AK1Q9BQI3 630 aaKnown RBP11.51□□□□□ -0.57
NOD1-206ENST00000434755 RGL1Q9NZL6 768 aa11.51□□□□□ -0.57
NOD1-206ENST00000434755 LOC102724159A0A0B4J2E5 919 aa11.51□□□□□ -0.57
NOD1-206ENST00000434755 ENC1O14682 589 aa11.51□□□□□ -0.57
NOD1-206ENST00000434755 NKRFO15226 690 aaKnown RBP eCLIP11.51□□□□□ -0.57
NOD1-206ENST00000434755 DGAT1O75907 488 aa11.51□□□□□ -0.57
NOD1-206ENST00000434755 RFC5P40937 340 aa11.51□□□□□ -0.57
NOD1-206ENST00000434755 PHKA2P46019 1235 aa11.51□□□□□ -0.57
NOD1-206ENST00000434755 EFNA5P52803 228 aa11.51□□□□□ -0.57
NOD1-206ENST00000434755 FCGRTP55899 365 aa11.51□□□□□ -0.57
NOD1-206ENST00000434755 ARID5BQ14865 1188 aa11.51□□□□□ -0.57
NOD1-206ENST00000434755 PWP2Q15269 919 aaKnown RBP11.51□□□□□ -0.57
NOD1-206ENST00000434755 FOXR2Q6PJQ5 311 aa11.51□□□□□ -0.57
NOD1-206ENST00000434755 NLRP7Q8WX94 980 aa11.51□□□□□ -0.57
NOD1-206ENST00000434755 PLCD4Q9BRC7 762 aa11.51□□□□□ -0.57
NOD1-206ENST00000434755 LCMT1Q9UIC8 334 aa11.51□□□□□ -0.57
NOD1-206ENST00000434755 PPP1R3GB7ZBB8 358 aa11.5□□□□□ -0.57
NOD1-206ENST00000434755 KCNK3O14649 394 aa11.5□□□□□ -0.57
NOD1-206ENST00000434755 TGFB3P10600 412 aa11.5□□□□□ -0.57
NOD1-206ENST00000434755 RGS2P41220 211 aa11.5□□□□□ -0.57
NOD1-206ENST00000434755 BSPRYQ5W0U4 402 aa11.5□□□□□ -0.57
NOD1-206ENST00000434755 CCDC105Q8IYK2 499 aa11.5□□□□□ -0.57
NOD1-206ENST00000434755 OPTNQ96CV9 577 aa11.5□□□□□ -0.57
NOD1-206ENST00000434755 HVCN1Q96D96 273 aa11.5□□□□□ -0.57
NOD1-206ENST00000434755 KCNF1Q9H3M0 494 aa11.5□□□□□ -0.57
NOD1-206ENST00000434755 DIS3Q9Y2L1 958 aaKnown RBP11.5□□□□□ -0.57
NOD1-206ENST00000434755 ADGRG1Q9Y653 693 aa11.5□□□□□ -0.57
NOD1-206ENST00000434755 NFKBIEO00221 500 aa11.5□□□□□ -0.57
NOD1-206ENST00000434755 EIF3DO15371 548 aaKnown RBP eCLIP11.5□□□□□ -0.57
NOD1-206ENST00000434755 ASAP2O43150 1006 aa11.5□□□□□ -0.57
NOD1-206ENST00000434755 LAMC2Q13753 1193 aa11.5□□□□□ -0.57
NOD1-206ENST00000434755 Q4G0T1 1027 aa11.5□□□□□ -0.57
NOD1-206ENST00000434755 SWSAP1Q6NVH7 229 aa11.5□□□□□ -0.57
NOD1-206ENST00000434755 CCDC63Q8NA47 563 aa11.5□□□□□ -0.57
NOD1-206ENST00000434755 C7orf43Q8WVR3 580 aa11.5□□□□□ -0.57
NOD1-206ENST00000434755 DYDC2Q96IM9 177 aa11.5□□□□□ -0.57
NOD1-206ENST00000434755 RANBP17Q9H2T7 1088 aaKnown RBP11.5□□□□□ -0.57
NOD1-206ENST00000434755 TXNDC16Q9P2K2 825 aa11.5□□□□□ -0.57
NOD1-206ENST00000434755 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.5□□□□□ -0.57
NOD1-206ENST00000434755 PAPPAQ13219 1627 aa11.5□□□□□ -0.57
NOD1-206ENST00000434755 RPS6P62753 249 aaKnown RBP11.5□□□□□ -0.57
NOD1-206ENST00000434755 SH3RF1Q7Z6J0 888 aa11.5□□□□□ -0.57
NOD1-206ENST00000434755 SLC35F6Q8N357 371 aa11.5□□□□□ -0.57
NOD1-206ENST00000434755 HPS3Q969F9 1004 aa11.5□□□□□ -0.57
NOD1-206ENST00000434755 PBKQ96KB5 322 aa11.5□□□□□ -0.57
NOD1-206ENST00000434755 SELENOSQ9BQE4 189 aa11.5□□□□□ -0.57
NOD1-206ENST00000434755 MKNK1Q9BUB5 465 aa11.5□□□□□ -0.57
NOD1-206ENST00000434755 RAB17Q9H0T7 212 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms