RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 SLC7A3Q8WY07 619 aa19.7■□□□□ 0.74
NUP50-208ENST00000430547 MRPL38Q96DV4 380 aaKnown RBP19.7■□□□□ 0.74
NUP50-208ENST00000430547 CEP170P1Q96L14 293 aa19.7■□□□□ 0.74
NUP50-208ENST00000430547 ADAMTS10Q9H324 1103 aa19.7■□□□□ 0.74
NUP50-208ENST00000430547 CYP26B1Q9NR63 512 aa19.7■□□□□ 0.74
NUP50-208ENST00000430547 PCDHA12Q9UN75 941 aa19.7■□□□□ 0.74
NUP50-208ENST00000430547 TCF20Q9UGU0 1960 aaKnown RBP19.7■□□□□ 0.74
NUP50-208ENST00000430547 ATG2AQ2TAZ0 1938 aa19.69■□□□□ 0.74
NUP50-208ENST00000430547 MAFO75444 373 aaPredicted RBP19.69■□□□□ 0.74
NUP50-208ENST00000430547 STBD1O95210 358 aa19.69■□□□□ 0.74
NUP50-208ENST00000430547 POLGP54098 1239 aaPredicted RBP19.69■□□□□ 0.74
NUP50-208ENST00000430547 OTUD6AQ7L8S5 288 aa19.69■□□□□ 0.74
NUP50-208ENST00000430547 CLP1Q92989 425 aaKnown RBP19.69■□□□□ 0.74
NUP50-208ENST00000430547 HLA-CQ95604 372 aa19.69■□□□□ 0.74
NUP50-208ENST00000430547 GCOM2Q9BZD3 368 aaPredicted RBP19.69■□□□□ 0.74
NUP50-208ENST00000430547 ZSWIM4Q9H7M6 989 aa19.69■□□□□ 0.74
NUP50-208ENST00000430547 SUCLA2Q9P2R7 463 aaPredicted RBP19.69■□□□□ 0.74
NUP50-208ENST00000430547 PPME1Q9Y570 386 aa19.69■□□□□ 0.74
NUP50-208ENST00000430547 C9IYK1 514 aa19.68■□□□□ 0.74
NUP50-208ENST00000430547 C5orf67F2Z3F1 127 aa19.68■□□□□ 0.74
NUP50-208ENST00000430547 DARSP14868 501 aaKnown RBP19.68■□□□□ 0.74
NUP50-208ENST00000430547 ATP2B1P20020 1258 aa19.68■□□□□ 0.74
NUP50-208ENST00000430547 CYP4A11Q02928 519 aa19.68■□□□□ 0.74
NUP50-208ENST00000430547 TFF2Q03403 129 aa19.68■□□□□ 0.74
NUP50-208ENST00000430547 DRP2Q13474 957 aa19.68■□□□□ 0.74
NUP50-208ENST00000430547 RHPN2Q8IUC4 686 aa19.68■□□□□ 0.74
NUP50-208ENST00000430547 C4orf19Q8IY42 314 aa19.68■□□□□ 0.74
NUP50-208ENST00000430547 CRIPAKQ8N1N5 446 aa19.68■□□□□ 0.74
NUP50-208ENST00000430547 DYDC2Q96IM9 177 aa19.68■□□□□ 0.74
NUP50-208ENST00000430547 CCDC43Q96MW1 224 aaKnown RBP19.68■□□□□ 0.74
NUP50-208ENST00000430547 PLVAPQ9BX97 442 aa19.68■□□□□ 0.74
NUP50-208ENST00000430547 TTC12Q9H892 705 aaPredicted RBP19.68■□□□□ 0.74
NUP50-208ENST00000430547 ATP6V0A4Q9HBG4 840 aa19.68■□□□□ 0.74
NUP50-208ENST00000430547 RGL1Q9NZL6 768 aa19.68■□□□□ 0.74
NUP50-208ENST00000430547 MRPL42Q9Y6G3 142 aaKnown RBP19.68■□□□□ 0.74
NUP50-208ENST00000430547 VCANP13611 3396 aa19.67■□□□□ 0.74
NUP50-208ENST00000430547 IGKV6-21A0A0C4DH24 114 aa19.67■□□□□ 0.74
NUP50-208ENST00000430547 YWHABP31946 246 aaKnown RBP19.67■□□□□ 0.74
NUP50-208ENST00000430547 MCM7P33993 719 aa19.67■□□□□ 0.74
NUP50-208ENST00000430547 RFC5P40937 340 aa19.67■□□□□ 0.74
NUP50-208ENST00000430547 TXKP42681 527 aa19.67■□□□□ 0.74
NUP50-208ENST00000430547 NPEPPSP55786 919 aa19.67■□□□□ 0.74
NUP50-208ENST00000430547 SPIRE1Q08AE8 756 aa19.67■□□□□ 0.74
NUP50-208ENST00000430547 CTTNQ14247 550 aaKnown RBP19.67■□□□□ 0.74
NUP50-208ENST00000430547 SPOUT1Q5T280 376 aaKnown RBP19.67■□□□□ 0.74
NUP50-208ENST00000430547 ZNF410Q86VK4 478 aa19.67■□□□□ 0.74
NUP50-208ENST00000430547 TPH2Q8IWU9 490 aa19.67■□□□□ 0.74
NUP50-208ENST00000430547 NEK9Q8TD19 979 aa19.67■□□□□ 0.74
NUP50-208ENST00000430547 CEP89Q96ST8 783 aa19.67■□□□□ 0.74
NUP50-208ENST00000430547 INO80BQ9C086 356 aaPredicted RBP19.67■□□□□ 0.74
NUP50-208ENST00000430547 LMAN2LQ9H0V9 348 aa19.67■□□□□ 0.74
NUP50-208ENST00000430547 FOXP1Q9H334 677 aaPredicted RBP19.67■□□□□ 0.74
NUP50-208ENST00000430547 TMEM161AQ9NX61 479 aa19.67■□□□□ 0.74
NUP50-208ENST00000430547 TBKBP1A7MCY6 615 aa19.66■□□□□ 0.74
NUP50-208ENST00000430547 SFPQP23246 707 aaKnown RBP eCLIP19.66■□□□□ 0.74
NUP50-208ENST00000430547 GATMP50440 423 aa19.66■□□□□ 0.74
NUP50-208ENST00000430547 DSC3Q14574 896 aa19.66■□□□□ 0.74
NUP50-208ENST00000430547 XKR9Q5GH70 373 aa19.66■□□□□ 0.74
NUP50-208ENST00000430547 FBXO18Q8NFZ0 1043 aa19.66■□□□□ 0.74
NUP50-208ENST00000430547 NLRP4Q96MN2 994 aa19.66■□□□□ 0.74
NUP50-208ENST00000430547 EIF2AK1Q9BQI3 630 aaKnown RBP19.66■□□□□ 0.74
NUP50-208ENST00000430547 ELAC1Q9H777 363 aaKnown RBP19.66■□□□□ 0.74
NUP50-208ENST00000430547 WRAP73Q9P2S5 460 aaPredicted RBP19.66■□□□□ 0.74
NUP50-208ENST00000430547 KIF3AQ9Y496 699 aa19.66■□□□□ 0.74
NUP50-208ENST00000430547 BRWD1Q9NSI6 2320 aa19.65■□□□□ 0.74
NUP50-208ENST00000430547 PLXNA4Q9HCM2 1894 aa19.65■□□□□ 0.74
NUP50-208ENST00000430547 A0A087WZ62 844 aa19.65■□□□□ 0.74
NUP50-208ENST00000430547 HOXA2O43364 376 aa19.65■□□□□ 0.74
NUP50-208ENST00000430547 GAS2O43903 313 aaKnown RBP19.65■□□□□ 0.74
NUP50-208ENST00000430547 LINC00271P0C7V0 271 aa19.65■□□□□ 0.74
NUP50-208ENST00000430547 FGFR4P22455 802 aa19.65■□□□□ 0.74
NUP50-208ENST00000430547 ABI1Q8IZP0 508 aa19.65■□□□□ 0.74
NUP50-208ENST00000430547 ADAMTS19Q8TE59 1207 aa19.65■□□□□ 0.74
NUP50-208ENST00000430547 PSPC1Q8WXF1 523 aaKnown RBP19.65■□□□□ 0.74
NUP50-208ENST00000430547 P2RX5Q93086 422 aa19.65■□□□□ 0.74
NUP50-208ENST00000430547 FDXACB1Q9BRP7 624 aaPredicted RBP19.65■□□□□ 0.74
NUP50-208ENST00000430547 NSUN3Q9H649 340 aaKnown RBP19.65■□□□□ 0.74
NUP50-208ENST00000430547 AAASQ9NRG9 546 aa19.65■□□□□ 0.74
NUP50-208ENST00000430547 BMP2KQ9NSY1 1161 aaPredicted RBP19.65■□□□□ 0.74
NUP50-208ENST00000430547 DACT1Q9NYF0 836 aa19.65■□□□□ 0.74
NUP50-208ENST00000430547 NOL7Q9UMY1 257 aaKnown RBP19.65■□□□□ 0.74
NUP50-208ENST00000430547 COL4A3BPQ9Y5P4 624 aa19.65■□□□□ 0.74
NUP50-208ENST00000430547 WNT7AO00755 349 aa19.64■□□□□ 0.73
NUP50-208ENST00000430547 CSDE1O75534 798 aaKnown RBP19.64■□□□□ 0.73
NUP50-208ENST00000430547 CSPG5O95196 566 aa19.64■□□□□ 0.73
NUP50-208ENST00000430547 ORC2Q13416 577 aaPredicted RBP19.64■□□□□ 0.73
NUP50-208ENST00000430547 NAALADL2Q58DX5 795 aa19.64■□□□□ 0.73
NUP50-208ENST00000430547 FAM102BQ5T8I3 360 aa19.64■□□□□ 0.73
NUP50-208ENST00000430547 RNF169Q8NCN4 708 aa19.64■□□□□ 0.73
NUP50-208ENST00000430547 TCP11Q8WWU5 503 aa19.64■□□□□ 0.73
NUP50-208ENST00000430547 DHX33Q9H6R0 707 aaKnown RBP19.64■□□□□ 0.73
NUP50-208ENST00000430547 PCDHB12Q9Y5F1 795 aa19.64■□□□□ 0.73
NUP50-208ENST00000430547 GRM6O15303 877 aa19.63■□□□□ 0.73
NUP50-208ENST00000430547 SLITRK3O94933 977 aa19.63■□□□□ 0.73
NUP50-208ENST00000430547 FGFR1P11362 822 aa19.63■□□□□ 0.73
NUP50-208ENST00000430547 KCNQ1P51787 676 aa19.63■□□□□ 0.73
NUP50-208ENST00000430547 FAM189BP81408 668 aa19.63■□□□□ 0.73
NUP50-208ENST00000430547 EMC2Q15006 297 aa19.63■□□□□ 0.73
NUP50-208ENST00000430547 NOSTRINQ8IVI9 506 aa19.63■□□□□ 0.73
NUP50-208ENST00000430547 ZNF579Q8NAF0 562 aaKnown RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms