RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 NPTX2P47972 431 aa24.29■■□□□ 1.48
VSX1-205ENST00000429762 SYCP1Q15431 976 aa24.29■■□□□ 1.48
VSX1-205ENST00000429762 MORN1Q5T089 497 aa24.29■■□□□ 1.48
VSX1-205ENST00000429762 TINF2Q9BSI4 451 aa24.29■■□□□ 1.48
VSX1-205ENST00000429762 NDST4Q9H3R1 872 aa24.29■■□□□ 1.48
VSX1-205ENST00000429762 ZFYVE28Q9HCC9 887 aa24.29■■□□□ 1.48
VSX1-205ENST00000429762 AKR1B15C9JRZ8 316 aaPredicted RBP24.28■■□□□ 1.48
VSX1-205ENST00000429762 ZNF500O60304 480 aaPredicted RBP24.28■■□□□ 1.48
VSX1-205ENST00000429762 AKAP3O75969 853 aa24.28■■□□□ 1.48
VSX1-205ENST00000429762 NCKAP1LP55160 1127 aa24.28■■□□□ 1.48
VSX1-205ENST00000429762 SREBF2Q12772 1141 aa24.28■■□□□ 1.48
VSX1-205ENST00000429762 PRAMEF19Q5SWL8 479 aa24.28■■□□□ 1.48
VSX1-205ENST00000429762 CEP89Q96ST8 783 aa24.28■■□□□ 1.48
VSX1-205ENST00000429762 FLRT1Q9NZU1 646 aa24.28■■□□□ 1.48
VSX1-205ENST00000429762 LGR5O75473 907 aa24.27■■□□□ 1.48
VSX1-205ENST00000429762 CYP2J2P51589 502 aa24.27■■□□□ 1.48
VSX1-205ENST00000429762 DMP1Q13316 513 aaPredicted RBP24.27■■□□□ 1.48
VSX1-205ENST00000429762 KIFAP3Q92845 792 aa24.27■■□□□ 1.48
VSX1-205ENST00000429762 PCMTD1Q96MG8 357 aaPredicted RBP24.27■■□□□ 1.48
VSX1-205ENST00000429762 NIFKQ9BYG3 293 aaKnown RBP24.27■■□□□ 1.48
VSX1-205ENST00000429762 AGPAT3Q9NRZ7 376 aa24.27■■□□□ 1.48
VSX1-205ENST00000429762 MAPTP10636 758 aaKnown RBP24.27■■□□□ 1.48
VSX1-205ENST00000429762 INHBEP58166 350 aa24.27■■□□□ 1.48
VSX1-205ENST00000429762 MAP2K5Q13163 448 aa24.27■■□□□ 1.48
VSX1-205ENST00000429762 FKBP15Q5T1M5 1219 aa24.27■■□□□ 1.48
VSX1-205ENST00000429762 MCPH1Q8NEM0 835 aa24.27■■□□□ 1.48
VSX1-205ENST00000429762 GBP3Q9H0R5 595 aa24.27■■□□□ 1.48
VSX1-205ENST00000429762 KMT5AQ9NQR1 393 aa24.27■■□□□ 1.48
VSX1-205ENST00000429762 NRBP2Q9NSY0 501 aa24.27■■□□□ 1.48
VSX1-205ENST00000429762 ZSWIM8A7E2V4 1837 aa24.26■■□□□ 1.47
VSX1-205ENST00000429762 ADGRA3Q8IWK6 1321 aa24.26■■□□□ 1.47
VSX1-205ENST00000429762 RBM47A0AV96 593 aaKnown RBP24.26■■□□□ 1.47
VSX1-205ENST00000429762 RASSF10A6NK89 507 aa24.26■■□□□ 1.47
VSX1-205ENST00000429762 CCL14Q16627 93 aa24.26■■□□□ 1.47
VSX1-205ENST00000429762 TRIM59Q8IWR1 403 aa24.26■■□□□ 1.47
VSX1-205ENST00000429762 TMEM161BQ8NDZ6 487 aa24.26■■□□□ 1.47
VSX1-205ENST00000429762 ACCSQ96QU6 501 aa24.26■■□□□ 1.47
VSX1-205ENST00000429762 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.26■■□□□ 1.47
VSX1-205ENST00000429762 A0A1W2PQC6 194 aa24.25■■□□□ 1.47
VSX1-205ENST00000429762 ADCY6O43306 1168 aa24.25■■□□□ 1.47
VSX1-205ENST00000429762 MFAP3LO75121 409 aa24.25■■□□□ 1.47
VSX1-205ENST00000429762 GH1P01241 217 aa24.25■■□□□ 1.47
VSX1-205ENST00000429762 CYP2B6P20813 491 aa24.25■■□□□ 1.47
VSX1-205ENST00000429762 CTGFP29279 349 aa24.25■■□□□ 1.47
VSX1-205ENST00000429762 ACVR2BQ13705 512 aa24.25■■□□□ 1.47
VSX1-205ENST00000429762 PLCB4Q15147 1175 aa24.25■■□□□ 1.47
VSX1-205ENST00000429762 TARBP2Q15633 366 aaKnown RBP24.25■■□□□ 1.47
VSX1-205ENST00000429762 HS2ST1Q7LGA3 356 aa24.25■■□□□ 1.47
VSX1-205ENST00000429762 TMEM139Q8IV31 216 aa24.25■■□□□ 1.47
VSX1-205ENST00000429762 ASAP3Q8TDY4 903 aa24.25■■□□□ 1.47
VSX1-205ENST00000429762 AFG1LQ8WV93 481 aa24.25■■□□□ 1.47
VSX1-205ENST00000429762 DHX33Q9H6R0 707 aaKnown RBP24.25■■□□□ 1.47
VSX1-205ENST00000429762 AOC2O75106 756 aa24.25■■□□□ 1.47
VSX1-205ENST00000429762 GNA14O95837 355 aa24.25■■□□□ 1.47
VSX1-205ENST00000429762 SMPD1P17405 629 aa24.25■■□□□ 1.47
VSX1-205ENST00000429762 GTF2BQ00403 316 aa24.25■■□□□ 1.47
VSX1-205ENST00000429762 NOLC1Q14978 699 aaKnown RBP eCLIP24.25■■□□□ 1.47
VSX1-205ENST00000429762 TRAPPC12Q8WVT3 735 aa24.25■■□□□ 1.47
VSX1-205ENST00000429762 PCIF1Q9H4Z3 704 aa24.25■■□□□ 1.47
VSX1-205ENST00000429762 DENND3A2RUS2 1198 aa24.24■■□□□ 1.47
VSX1-205ENST00000429762 RPL13P26373 211 aaKnown RBP24.24■■□□□ 1.47
VSX1-205ENST00000429762 MARSP56192 900 aaKnown RBP24.24■■□□□ 1.47
VSX1-205ENST00000429762 ZBTB10Q96DT7 871 aa24.24■■□□□ 1.47
VSX1-205ENST00000429762 TMX1Q9H3N1 280 aa24.24■■□□□ 1.47
VSX1-205ENST00000429762 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.24■■□□□ 1.47
VSX1-205ENST00000429762 EMSYQ7Z589 1322 aa24.24■■□□□ 1.47
VSX1-205ENST00000429762 USP27XA6NNY8 438 aa24.23■■□□□ 1.47
VSX1-205ENST00000429762 TM4SF4P48230 202 aa24.23■■□□□ 1.47
VSX1-205ENST00000429762 DRP2Q13474 957 aa24.23■■□□□ 1.47
VSX1-205ENST00000429762 LAMC2Q13753 1193 aa24.23■■□□□ 1.47
VSX1-205ENST00000429762 ARMCX3Q9UH62 379 aaPredicted RBP24.23■■□□□ 1.47
VSX1-205ENST00000429762 TTC26A0AVF1 554 aa24.23■■□□□ 1.47
VSX1-205ENST00000429762 ZNF286BP0CG31 522 aa24.23■■□□□ 1.47
VSX1-205ENST00000429762 CLCN1P35523 988 aa24.23■■□□□ 1.47
VSX1-205ENST00000429762 SMTNP53814 917 aa24.23■■□□□ 1.47
VSX1-205ENST00000429762 ALCAMQ13740 583 aa24.23■■□□□ 1.47
VSX1-205ENST00000429762 DCAF17Q5H9S7 520 aaPredicted RBP24.23■■□□□ 1.47
VSX1-205ENST00000429762 PLPPR4Q7Z2D5 763 aa24.23■■□□□ 1.47
VSX1-205ENST00000429762 ZSWIM2Q8NEG5 633 aa24.23■■□□□ 1.47
VSX1-205ENST00000429762 SLC7A3Q8WY07 619 aa24.23■■□□□ 1.47
VSX1-205ENST00000429762 ERGIC2Q96RQ1 377 aa24.23■■□□□ 1.47
VSX1-205ENST00000429762 BAG1Q99933 345 aaPredicted RBP24.23■■□□□ 1.47
VSX1-205ENST00000429762 CBWD1Q9BRT8 395 aa24.23■■□□□ 1.47
VSX1-205ENST00000429762 ST6GALNAC4Q9H4F1 302 aa24.23■■□□□ 1.47
VSX1-205ENST00000429762 SLC5A4Q9NY91 659 aa24.23■■□□□ 1.47
VSX1-205ENST00000429762 TBX20Q9UMR3 447 aa24.23■■□□□ 1.47
VSX1-205ENST00000429762 TRPC6Q9Y210 931 aa24.23■■□□□ 1.47
VSX1-205ENST00000429762 ZBTB42B2RXF5 422 aa24.22■■□□□ 1.47
VSX1-205ENST00000429762 TOMM70O94826 608 aa24.22■■□□□ 1.47
VSX1-205ENST00000429762 EPB41P11171 864 aaKnown RBP24.22■■□□□ 1.47
VSX1-205ENST00000429762 CYP2C19P33261 490 aa24.22■■□□□ 1.47
VSX1-205ENST00000429762 FRMD5Q7Z6J6 570 aa24.22■■□□□ 1.47
VSX1-205ENST00000429762 ATP8B4Q8TF62 1192 aa24.22■■□□□ 1.47
VSX1-205ENST00000429762 BBXQ8WY36 941 aaPredicted RBP24.22■■□□□ 1.47
VSX1-205ENST00000429762 LENG1Q96BZ8 264 aaPredicted RBP24.22■■□□□ 1.47
VSX1-205ENST00000429762 FAM167AQ96KS9 214 aa24.22■■□□□ 1.47
VSX1-205ENST00000429762 IFT74Q96LB3 600 aa24.22■■□□□ 1.47
VSX1-205ENST00000429762 ARHGAP39Q9C0H5 1083 aa24.22■■□□□ 1.47
VSX1-205ENST00000429762 ABHD16BQ9H3Z7 469 aa24.22■■□□□ 1.47
VSX1-205ENST00000429762 TMEM206Q9H813 350 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 188.9 ms