RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 DHX33Q9H6R0 707 aaKnown RBP14.28□□□□□ -0.12
GPC1-204ENST00000426280 XPNPEP1Q9NQW7 623 aa14.28□□□□□ -0.12
GPC1-204ENST00000426280 SUCLA2Q9P2R7 463 aaPredicted RBP14.28□□□□□ -0.12
GPC1-204ENST00000426280 UNC80Q8N2C7 3258 aa14.27□□□□□ -0.12
GPC1-204ENST00000426280 ADGRA3Q8IWK6 1321 aa14.27□□□□□ -0.12
GPC1-204ENST00000426280 H3BNC9 293 aa14.27□□□□□ -0.13
GPC1-204ENST00000426280 GPR182O15218 404 aa14.27□□□□□ -0.13
GPC1-204ENST00000426280 GRM6O15303 877 aa14.27□□□□□ -0.13
GPC1-204ENST00000426280 MED24O75448 989 aa14.27□□□□□ -0.13
GPC1-204ENST00000426280 FGFR1P11362 822 aa14.27□□□□□ -0.13
GPC1-204ENST00000426280 TMOD1P28289 359 aa14.27□□□□□ -0.13
GPC1-204ENST00000426280 YWHABP31946 246 aaKnown RBP14.27□□□□□ -0.13
GPC1-204ENST00000426280 BMPR1AP36894 532 aa14.27□□□□□ -0.13
GPC1-204ENST00000426280 SARSP49591 514 aaKnown RBP14.27□□□□□ -0.13
GPC1-204ENST00000426280 MCM2P49736 904 aa14.27□□□□□ -0.13
GPC1-204ENST00000426280 HMGN5P82970 282 aaKnown RBP14.27□□□□□ -0.13
GPC1-204ENST00000426280 GPM6BQ13491 265 aa14.27□□□□□ -0.13
GPC1-204ENST00000426280 CAMK1Q14012 370 aa14.27□□□□□ -0.13
GPC1-204ENST00000426280 BTG3Q14201 252 aaPredicted RBP14.27□□□□□ -0.13
GPC1-204ENST00000426280 IL17AQ16552 155 aa14.27□□□□□ -0.13
GPC1-204ENST00000426280 RHPN2Q8IUC4 686 aa14.27□□□□□ -0.13
GPC1-204ENST00000426280 NPAS4Q8IUM7 802 aa14.27□□□□□ -0.13
GPC1-204ENST00000426280 SLFN12Q8IYM2 578 aa14.27□□□□□ -0.13
GPC1-204ENST00000426280 FAM184AQ8NB25 1140 aa14.27□□□□□ -0.13
GPC1-204ENST00000426280 PIGOQ8TEQ8 1089 aa14.27□□□□□ -0.13
GPC1-204ENST00000426280 MAP7D2Q96T17 732 aa14.27□□□□□ -0.13
GPC1-204ENST00000426280 MINDY3Q9H8M7 445 aa14.27□□□□□ -0.13
GPC1-204ENST00000426280 PRRC2BQ5JSZ5 2229 aaKnown RBP14.26□□□□□ -0.13
GPC1-204ENST00000426280 TRANK1O15050 2925 aa14.26□□□□□ -0.13
GPC1-204ENST00000426280 DNAJB1P25685 340 aa14.26□□□□□ -0.13
GPC1-204ENST00000426280 U2AF2P26368 475 aaKnown RBP eCLIP14.26□□□□□ -0.13
GPC1-204ENST00000426280 TECP42680 631 aa14.26□□□□□ -0.13
GPC1-204ENST00000426280 SAFBQ15424 915 aaKnown RBP eCLIP14.26□□□□□ -0.13
GPC1-204ENST00000426280 ECM1Q16610 540 aa14.26□□□□□ -0.13
GPC1-204ENST00000426280 XKR9Q5GH70 373 aa14.26□□□□□ -0.13
GPC1-204ENST00000426280 TTC38Q5R3I4 469 aa14.26□□□□□ -0.13
GPC1-204ENST00000426280 LRRC55Q6ZSA7 311 aa14.26□□□□□ -0.13
GPC1-204ENST00000426280 SLC24A5Q71RS6 500 aa14.26□□□□□ -0.13
GPC1-204ENST00000426280 NOSTRINQ8IVI9 506 aa14.26□□□□□ -0.13
GPC1-204ENST00000426280 IL27Q8NEV9 243 aa14.26□□□□□ -0.13
GPC1-204ENST00000426280 PRPF31Q8WWY3 499 aaKnown RBP14.26□□□□□ -0.13
GPC1-204ENST00000426280 NLRP7Q8WX94 980 aa14.26□□□□□ -0.13
GPC1-204ENST00000426280 CLP1Q92989 425 aaKnown RBP14.26□□□□□ -0.13
GPC1-204ENST00000426280 ZSWIM4Q9H7M6 989 aa14.26□□□□□ -0.13
GPC1-204ENST00000426280 IFT122Q9HBG6 1241 aa14.26□□□□□ -0.13
GPC1-204ENST00000426280 ALG13Q9NP73 1137 aaKnown RBP14.26□□□□□ -0.13
GPC1-204ENST00000426280 PCDHB7Q9Y5E2 793 aa14.26□□□□□ -0.13
GPC1-204ENST00000426280 PCDHB6Q9Y5E3 794 aa14.26□□□□□ -0.13
GPC1-204ENST00000426280 DENND3A2RUS2 1198 aa14.25□□□□□ -0.13
GPC1-204ENST00000426280 MEIS3P2A8K0S8 358 aa14.25□□□□□ -0.13
GPC1-204ENST00000426280 GTPBP6O43824 516 aaPredicted RBP14.25□□□□□ -0.13
GPC1-204ENST00000426280 CSPG5O95196 566 aa14.25□□□□□ -0.13
GPC1-204ENST00000426280 ATF7P17544 494 aaPredicted RBP14.25□□□□□ -0.13
GPC1-204ENST00000426280 GJB2P29033 226 aa14.25□□□□□ -0.13
GPC1-204ENST00000426280 CTNNB1P35222 781 aa14.25□□□□□ -0.13
GPC1-204ENST00000426280 KCNQ1P51787 676 aa14.25□□□□□ -0.13
GPC1-204ENST00000426280 CATSPER3Q86XQ3 398 aa14.25□□□□□ -0.13
GPC1-204ENST00000426280 POLD4Q9HCU8 107 aa14.25□□□□□ -0.13
GPC1-204ENST00000426280 TBKBP1A7MCY6 615 aa14.24□□□□□ -0.13
GPC1-204ENST00000426280 C5orf67F2Z3F1 127 aa14.24□□□□□ -0.13
GPC1-204ENST00000426280 LYPLA2O95372 231 aa14.24□□□□□ -0.13
GPC1-204ENST00000426280 SRGAP2CP0DJJ0 459 aa14.24□□□□□ -0.13
GPC1-204ENST00000426280 EMC2Q15006 297 aa14.24□□□□□ -0.13
GPC1-204ENST00000426280 SKIV2LQ15477 1246 aaKnown RBP14.24□□□□□ -0.13
GPC1-204ENST00000426280 LONRF3Q496Y0 759 aa14.24□□□□□ -0.13
GPC1-204ENST00000426280 ECHDC2Q86YB7 292 aa14.24□□□□□ -0.13
GPC1-204ENST00000426280 CMTR2Q8IYT2 770 aaKnown RBP14.24□□□□□ -0.13
GPC1-204ENST00000426280 ASAP3Q8TDY4 903 aa14.24□□□□□ -0.13
GPC1-204ENST00000426280 NLRP4Q96MN2 994 aa14.24□□□□□ -0.13
GPC1-204ENST00000426280 CASD1Q96PB1 797 aa14.24□□□□□ -0.13
GPC1-204ENST00000426280 ASB2Q96Q27 587 aa14.24□□□□□ -0.13
GPC1-204ENST00000426280 CWH43Q9H720 699 aa14.24□□□□□ -0.13
GPC1-204ENST00000426280 TYW1Q9NV66 732 aaKnown RBP14.24□□□□□ -0.13
GPC1-204ENST00000426280 LMCD1Q9NZU5 365 aa14.24□□□□□ -0.13
GPC1-204ENST00000426280 THEGQ9P2T0 379 aa14.24□□□□□ -0.13
GPC1-204ENST00000426280 LRFN2Q9ULH4 789 aa14.24□□□□□ -0.13
GPC1-204ENST00000426280 PCDHGC5Q9Y5F6 944 aa14.24□□□□□ -0.13
GPC1-204ENST00000426280 NLRC5Q86WI3 1866 aa14.23□□□□□ -0.13
GPC1-204ENST00000426280 PP2D1A8MPX8 630 aa14.23□□□□□ -0.13
GPC1-204ENST00000426280 ITGB1P05556 798 aa14.23□□□□□ -0.13
GPC1-204ENST00000426280 OR52Z1P0C646 297 aa14.23□□□□□ -0.13
GPC1-204ENST00000426280 STAG3L1P0CL83 205 aa14.23□□□□□ -0.13
GPC1-204ENST00000426280 BMP1P13497 986 aa14.23□□□□□ -0.13
GPC1-204ENST00000426280 GTF2F1P35269 517 aaKnown RBP eCLIP14.23□□□□□ -0.13
GPC1-204ENST00000426280 IRS1P35568 1242 aa14.23□□□□□ -0.13
GPC1-204ENST00000426280 RARRES1P49788 294 aa14.23□□□□□ -0.13
GPC1-204ENST00000426280 POLGP54098 1239 aaPredicted RBP14.23□□□□□ -0.13
GPC1-204ENST00000426280 LAMTOR4Q0VGL1 99 aa14.23□□□□□ -0.13
GPC1-204ENST00000426280 CUL4AQ13619 759 aa14.23□□□□□ -0.13
GPC1-204ENST00000426280 CLLU1OSQ5K130 101 aa14.23□□□□□ -0.13
GPC1-204ENST00000426280 ZNF598Q86UK7 904 aaKnown RBP14.23□□□□□ -0.13
GPC1-204ENST00000426280 KLHL23Q8NBE8 558 aa14.23□□□□□ -0.13
GPC1-204ENST00000426280 SPPL3Q8TCT6 385 aa14.23□□□□□ -0.13
GPC1-204ENST00000426280 LPPQ93052 612 aa14.23□□□□□ -0.13
GPC1-204ENST00000426280 SNX21Q969T3 373 aa14.23□□□□□ -0.13
GPC1-204ENST00000426280 MRPL38Q96DV4 380 aaKnown RBP14.23□□□□□ -0.13
GPC1-204ENST00000426280 SCLT1Q96NL6 688 aa14.23□□□□□ -0.13
GPC1-204ENST00000426280 SAMD11Q96NU1 681 aa14.23□□□□□ -0.13
GPC1-204ENST00000426280 NECAB3Q96P71 396 aaPredicted RBP14.23□□□□□ -0.13
GPC1-204ENST00000426280 GCOM2Q9BZD3 368 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms