RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 TTC26A0AVF1 554 aa16.7■□□□□ 0.26
ACTB-204ENST00000425660 RNF225M0QZC1 329 aaPredicted RBP16.7■□□□□ 0.26
ACTB-204ENST00000425660 LGR5O75473 907 aa16.7■□□□□ 0.26
ACTB-204ENST00000425660 OFD1O75665 1012 aa16.7■□□□□ 0.26
ACTB-204ENST00000425660 SLC10A3P09131 477 aa16.7■□□□□ 0.26
ACTB-204ENST00000425660 STAT5BP51692 787 aa16.7■□□□□ 0.26
ACTB-204ENST00000425660 INHBEP58166 350 aa16.7■□□□□ 0.26
ACTB-204ENST00000425660 PPP2R3AQ06190 1150 aa16.7■□□□□ 0.26
ACTB-204ENST00000425660 TARBP2Q15633 366 aaKnown RBP16.7■□□□□ 0.26
ACTB-204ENST00000425660 HSDL1Q3SXM5 330 aa16.7■□□□□ 0.26
ACTB-204ENST00000425660 FAM160B1Q5W0V3 765 aa16.7■□□□□ 0.26
ACTB-204ENST00000425660 HAUS6Q7Z4H7 955 aa16.7■□□□□ 0.26
ACTB-204ENST00000425660 PLEKHH3Q7Z736 793 aa16.7■□□□□ 0.26
ACTB-204ENST00000425660 CCAR2Q8N163 923 aaKnown RBP16.7■□□□□ 0.26
ACTB-204ENST00000425660 CPLX3Q8WVH0 158 aa16.7■□□□□ 0.26
ACTB-204ENST00000425660 HVCN1Q96D96 273 aa16.7■□□□□ 0.26
ACTB-204ENST00000425660 KATNBL1Q9H079 304 aa16.7■□□□□ 0.26
ACTB-204ENST00000425660 DHX33Q9H6R0 707 aaKnown RBP16.7■□□□□ 0.26
ACTB-204ENST00000425660 ATP6V0A4Q9HBG4 840 aa16.7■□□□□ 0.26
ACTB-204ENST00000425660 METTL14Q9HCE5 456 aaKnown RBP16.7■□□□□ 0.26
ACTB-204ENST00000425660 CGNQ9P2M7 1197 aaKnown RBP16.7■□□□□ 0.26
ACTB-204ENST00000425660 PPME1Q9Y570 386 aa16.7■□□□□ 0.26
ACTB-204ENST00000425660 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.7■□□□□ 0.264e-16■□□□□ 9.9
ACTB-204ENST00000425660 ZNF236Q9UL36 1845 aa16.7■□□□□ 0.26
ACTB-204ENST00000425660 A0A1W2PQJ5 194 aa16.7■□□□□ 0.26
ACTB-204ENST00000425660 TXNP10599 105 aaKnown RBP16.7■□□□□ 0.26
ACTB-204ENST00000425660 NPTX2P47972 431 aa16.7■□□□□ 0.26
ACTB-204ENST00000425660 PEX3P56589 373 aa16.7■□□□□ 0.26
ACTB-204ENST00000425660 SNRPFP62306 86 aaKnown RBP16.7■□□□□ 0.26
ACTB-204ENST00000425660 DMP1Q13316 513 aaPredicted RBP16.7■□□□□ 0.26
ACTB-204ENST00000425660 TAPT1Q6NXT6 567 aa16.7■□□□□ 0.26
ACTB-204ENST00000425660 KSR1Q8IVT5 923 aa16.7■□□□□ 0.26
ACTB-204ENST00000425660 C12orf56Q8IXR9 622 aa16.7■□□□□ 0.26
ACTB-204ENST00000425660 TMEM161BQ8NDZ6 487 aa16.7■□□□□ 0.26
ACTB-204ENST00000425660 BORCS6Q96GS4 357 aa16.7■□□□□ 0.26
ACTB-204ENST00000425660 DNAJC7Q99615 494 aa16.7■□□□□ 0.26
ACTB-204ENST00000425660 ARMCX3Q9UH62 379 aaPredicted RBP16.7■□□□□ 0.26
ACTB-204ENST00000425660 MYH11P35749 1972 aa16.7■□□□□ 0.26
ACTB-204ENST00000425660 EMSYQ7Z589 1322 aa16.69■□□□□ 0.26
ACTB-204ENST00000425660 TRIM21P19474 475 aaKnown RBP16.69■□□□□ 0.26
ACTB-204ENST00000425660 SMTNP53814 917 aa16.69■□□□□ 0.26
ACTB-204ENST00000425660 PLPPR4Q7Z2D5 763 aa16.69■□□□□ 0.26
ACTB-204ENST00000425660 DHX37Q8IY37 1157 aaKnown RBP16.69■□□□□ 0.26
ACTB-204ENST00000425660 ACCSQ96QU6 501 aa16.69■□□□□ 0.26
ACTB-204ENST00000425660 IKZF4Q9H2S9 585 aa16.69■□□□□ 0.26
ACTB-204ENST00000425660 PDGFCQ9NRA1 345 aa16.69■□□□□ 0.26
ACTB-204ENST00000425660 TLL2Q9Y6L7 1015 aa16.69■□□□□ 0.26
ACTB-204ENST00000425660 SLC15A5A6NIM6 579 aa16.68■□□□□ 0.26
ACTB-204ENST00000425660 CLIC2O15247 247 aa16.68■□□□□ 0.26
ACTB-204ENST00000425660 TOMM70O94826 608 aa16.68■□□□□ 0.26
ACTB-204ENST00000425660 EPB41P11171 864 aaKnown RBP16.68■□□□□ 0.26
ACTB-204ENST00000425660 KRT9P35527 623 aa16.68■□□□□ 0.26
ACTB-204ENST00000425660 MTERF2Q49AM1 385 aa16.68■□□□□ 0.26
ACTB-204ENST00000425660 BSNDQ8WZ55 320 aa16.68■□□□□ 0.26
ACTB-204ENST00000425660 MAML3Q96JK9 1138 aa16.68■□□□□ 0.26
ACTB-204ENST00000425660 FAM167AQ96KS9 214 aa16.68■□□□□ 0.26
ACTB-204ENST00000425660 AZI2Q9H6S1 392 aa16.68■□□□□ 0.26
ACTB-204ENST00000425660 NRBP2Q9NSY0 501 aa16.68■□□□□ 0.26
ACTB-204ENST00000425660 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.68■□□□□ 0.26
ACTB-204ENST00000425660 KCNG1Q9UIX4 513 aa16.68■□□□□ 0.26
ACTB-204ENST00000425660 LUC7L2Q9Y383 392 aaKnown RBP16.68■□□□□ 0.26
ACTB-204ENST00000425660 PLXNA1Q9UIW2 1896 aa16.68■□□□□ 0.26
ACTB-204ENST00000425660 USP27XA6NNY8 438 aa16.68■□□□□ 0.26
ACTB-204ENST00000425660 FAM155AB1AL88 458 aaPredicted RBP16.68■□□□□ 0.26
ACTB-204ENST00000425660 NOP56O00567 594 aaKnown RBP16.68■□□□□ 0.26
ACTB-204ENST00000425660 SLC16A4O15374 487 aa16.68■□□□□ 0.26
ACTB-204ENST00000425660 SNAI1O95863 264 aaPredicted RBP16.68■□□□□ 0.26
ACTB-204ENST00000425660 SCP2P22307 547 aa16.68■□□□□ 0.26
ACTB-204ENST00000425660 ABCD1P33897 745 aa16.68■□□□□ 0.26
ACTB-204ENST00000425660 PSMC2P35998 433 aaKnown RBP16.68■□□□□ 0.26
ACTB-204ENST00000425660 RFC5P40937 340 aa16.68■□□□□ 0.26
ACTB-204ENST00000425660 CASP4P49662 377 aa16.68■□□□□ 0.26
ACTB-204ENST00000425660 KLK7P49862 253 aa16.68■□□□□ 0.26
ACTB-204ENST00000425660 SLC26A2P50443 739 aa16.68■□□□□ 0.26
ACTB-204ENST00000425660 EMC2Q15006 297 aa16.68■□□□□ 0.26
ACTB-204ENST00000425660 DPP9Q86TI2 863 aa16.68■□□□□ 0.26
ACTB-204ENST00000425660 IFNL1Q8IU54 200 aa16.68■□□□□ 0.26
ACTB-204ENST00000425660 MAP4K3Q8IVH8 894 aa16.68■□□□□ 0.26
ACTB-204ENST00000425660 MSL3Q8N5Y2 521 aaKnown RBP16.68■□□□□ 0.26
ACTB-204ENST00000425660 SMC1BQ8NDV3 1235 aa16.68■□□□□ 0.26
ACTB-204ENST00000425660 OR8K1Q8NGG5 319 aa16.68■□□□□ 0.26
ACTB-204ENST00000425660 EMID1Q96A84 441 aaPredicted RBP16.68■□□□□ 0.26
ACTB-204ENST00000425660 SPATA33Q96N06 139 aa16.68■□□□□ 0.26
ACTB-204ENST00000425660 MCM3APO60318 1980 aa16.67■□□□□ 0.26
ACTB-204ENST00000425660 MYH9P35579 1960 aaKnown RBP16.67■□□□□ 0.26
ACTB-204ENST00000425660 XRCC5P13010 732 aaKnown RBP16.67■□□□□ 0.26
ACTB-204ENST00000425660 POLGP54098 1239 aaPredicted RBP16.67■□□□□ 0.26
ACTB-204ENST00000425660 ZBED6P86452 979 aa16.67■□□□□ 0.26
ACTB-204ENST00000425660 KCNMA1Q12791 1236 aa16.67■□□□□ 0.26
ACTB-204ENST00000425660 TAF1CQ15572 869 aaPredicted RBP16.67■□□□□ 0.26
ACTB-204ENST00000425660 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.67■□□□□ 0.26
ACTB-204ENST00000425660 SYCP3Q8IZU3 236 aa16.67■□□□□ 0.26
ACTB-204ENST00000425660 SLC7A3Q8WY07 619 aa16.67■□□□□ 0.26
ACTB-204ENST00000425660 BBXQ8WY36 941 aaPredicted RBP16.67■□□□□ 0.26
ACTB-204ENST00000425660 HHIPL1Q96JK4 782 aa16.67■□□□□ 0.26
ACTB-204ENST00000425660 KMT5AQ9NQR1 393 aa16.67■□□□□ 0.26
ACTB-204ENST00000425660 ARHGAP28Q9P2N2 729 aa16.67■□□□□ 0.26
ACTB-204ENST00000425660 CPA4Q9UI42 421 aa16.67■□□□□ 0.26
ACTB-204ENST00000425660 TBX20Q9UMR3 447 aa16.67■□□□□ 0.26
ACTB-204ENST00000425660 TLR2O60603 784 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms