RNA–Protein interactions for RNA: ENST00000414218.1

LMBR1-203, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-203ENST00000414218 FAM20AQ96MK3 541 aa23.17■■□□□ 1.3
LMBR1-203ENST00000414218 CEP89Q96ST8 783 aa23.17■■□□□ 1.3
LMBR1-203ENST00000414218 KCNMB3Q9NPA1 279 aa23.17■■□□□ 1.3
LMBR1-203ENST00000414218 TMEM161AQ9NX61 479 aa23.17■■□□□ 1.3
LMBR1-203ENST00000414218 GRXCR2A6NFK2 248 aa23.16■■□□□ 1.3
LMBR1-203ENST00000414218 NCK2O43639 380 aa23.16■■□□□ 1.3
LMBR1-203ENST00000414218 CCNT1O60563 726 aaKnown RBP23.16■■□□□ 1.3
LMBR1-203ENST00000414218 FDPSP14324 419 aaKnown RBP23.16■■□□□ 1.3
LMBR1-203ENST00000414218 DARSP14868 501 aaKnown RBP23.16■■□□□ 1.3
LMBR1-203ENST00000414218 IL9P15248 144 aa23.16■■□□□ 1.3
LMBR1-203ENST00000414218 GCFC2P16383 781 aaKnown RBP23.16■■□□□ 1.3
LMBR1-203ENST00000414218 FGFR4P22455 802 aa23.16■■□□□ 1.3
LMBR1-203ENST00000414218 GTF2F1P35269 517 aaKnown RBP eCLIP23.16■■□□□ 1.31e-6■□□□□ 8.3
LMBR1-203ENST00000414218 EARS2Q5JPH6 523 aaKnown RBP23.16■■□□□ 1.3
LMBR1-203ENST00000414218 NLRP7Q8WX94 980 aa23.16■■□□□ 1.3
LMBR1-203ENST00000414218 IGFLR1Q9H665 355 aa23.16■■□□□ 1.3
LMBR1-203ENST00000414218 ELAC1Q9H777 363 aaKnown RBP23.16■■□□□ 1.3
LMBR1-203ENST00000414218 CD320Q9NPF0 282 aa23.16■■□□□ 1.3
LMBR1-203ENST00000414218 HCSTQ9UBK5 93 aa23.16■■□□□ 1.3
LMBR1-203ENST00000414218 VAV3Q9UKW4 847 aa23.16■■□□□ 1.3
LMBR1-203ENST00000414218 ZSCAN20P17040 1043 aaPredicted RBP23.15■■□□□ 1.3
LMBR1-203ENST00000414218 PSMC5P62195 406 aa23.15■■□□□ 1.3
LMBR1-203ENST00000414218 PPP2R5CQ13362 524 aa23.15■■□□□ 1.3
LMBR1-203ENST00000414218 CTC1Q2NKJ3 1217 aa23.15■■□□□ 1.3
LMBR1-203ENST00000414218 PUS10Q3MIT2 529 aaKnown RBP23.15■■□□□ 1.3
LMBR1-203ENST00000414218 FAM178BQ8IXR5 827 aa23.15■■□□□ 1.3
LMBR1-203ENST00000414218 POF1BQ8WVV4 589 aa23.15■■□□□ 1.3
LMBR1-203ENST00000414218 TYW1Q9NV66 732 aaKnown RBP23.15■■□□□ 1.3
LMBR1-203ENST00000414218 PCDHB12Q9Y5F1 795 aa23.15■■□□□ 1.3
LMBR1-203ENST00000414218 PLXNA4Q9HCM2 1894 aa23.15■■□□□ 1.3
LMBR1-203ENST00000414218 FAM205CA6NFA0 338 aa23.14■■□□□ 1.29
LMBR1-203ENST00000414218 CSDE1O75534 798 aaKnown RBP23.14■■□□□ 1.29
LMBR1-203ENST00000414218 SEC24BO95487 1268 aa23.14■■□□□ 1.29
LMBR1-203ENST00000414218 IRS1P35568 1242 aa23.14■■□□□ 1.29
LMBR1-203ENST00000414218 LTBRP36941 435 aa23.14■■□□□ 1.29
LMBR1-203ENST00000414218 DNM2P50570 870 aa23.14■■□□□ 1.29
LMBR1-203ENST00000414218 NEK4P51957 841 aa23.14■■□□□ 1.29
LMBR1-203ENST00000414218 NR5A1Q13285 461 aa23.14■■□□□ 1.29
LMBR1-203ENST00000414218 PLA2G4FQ68DD2 849 aa23.14■■□□□ 1.29
LMBR1-203ENST00000414218 ANO5Q75V66 913 aa23.14■■□□□ 1.29
LMBR1-203ENST00000414218 HAS1Q92839 578 aa23.14■■□□□ 1.29
LMBR1-203ENST00000414218 GTF3C6Q969F1 213 aa23.14■■□□□ 1.29
LMBR1-203ENST00000414218 AAASQ9NRG9 546 aa23.14■■□□□ 1.29
LMBR1-203ENST00000414218 IGKV6-21A0A0C4DH24 114 aa23.13■■□□□ 1.29
LMBR1-203ENST00000414218 MARCH6O60337 910 aa23.13■■□□□ 1.29
LMBR1-203ENST00000414218 KRT2P35908 639 aa23.13■■□□□ 1.29
LMBR1-203ENST00000414218 QARSP47897 775 aaKnown RBP23.13■■□□□ 1.29
LMBR1-203ENST00000414218 ECHDC2Q86YB7 292 aa23.13■■□□□ 1.29
LMBR1-203ENST00000414218 POTEDQ86YR6 584 aa23.13■■□□□ 1.29
LMBR1-203ENST00000414218 KHSRPQ92945 711 aaKnown RBP eCLIP23.13■■□□□ 1.298e-7■■■□□ 17.2
LMBR1-203ENST00000414218 NAP1L4Q99733 375 aaKnown RBP23.13■■□□□ 1.29
LMBR1-203ENST00000414218 GCOM2Q9BZD3 368 aaPredicted RBP23.13■■□□□ 1.29
LMBR1-203ENST00000414218 EPHX3Q9H6B9 360 aa23.13■■□□□ 1.29
LMBR1-203ENST00000414218 RNF19AQ9NV58 838 aa23.13■■□□□ 1.29
LMBR1-203ENST00000414218 SUCLA2Q9P2R7 463 aaPredicted RBP23.13■■□□□ 1.29
LMBR1-203ENST00000414218 TBX3O15119 743 aa23.12■■□□□ 1.29
LMBR1-203ENST00000414218 LINC01565O15544 149 aa23.12■■□□□ 1.29
LMBR1-203ENST00000414218 EIF5BO60841 1220 aaKnown RBP23.12■■□□□ 1.29
LMBR1-203ENST00000414218 CDC42EP1Q00587 391 aa23.12■■□□□ 1.29
LMBR1-203ENST00000414218 DLX2Q07687 328 aaPredicted RBP23.12■■□□□ 1.29
LMBR1-203ENST00000414218 CLUL1Q15846 466 aa23.12■■□□□ 1.29
LMBR1-203ENST00000414218 ADGRD2Q7Z7M1 963 aa23.12■■□□□ 1.29
LMBR1-203ENST00000414218 COLGALT1Q8NBJ5 622 aa23.12■■□□□ 1.29
LMBR1-203ENST00000414218 RNF169Q8NCN4 708 aa23.12■■□□□ 1.29
LMBR1-203ENST00000414218 NSUN7Q8NE18 718 aaKnown RBP23.12■■□□□ 1.29
LMBR1-203ENST00000414218 CASD1Q96PB1 797 aa23.12■■□□□ 1.29
LMBR1-203ENST00000414218 TMEM117Q9H0C3 514 aa23.12■■□□□ 1.29
LMBR1-203ENST00000414218 CWH43Q9H720 699 aa23.12■■□□□ 1.29
LMBR1-203ENST00000414218 A0A087WZ62 844 aa23.11■■□□□ 1.29
LMBR1-203ENST00000414218 MAFO75444 373 aaPredicted RBP23.11■■□□□ 1.29
LMBR1-203ENST00000414218 P4HBP07237 508 aaKnown RBP23.11■■□□□ 1.29
LMBR1-203ENST00000414218 FOSBP53539 338 aa23.11■■□□□ 1.29
LMBR1-203ENST00000414218 NPEPPSP55786 919 aa23.11■■□□□ 1.29
LMBR1-203ENST00000414218 RHPN2Q8IUC4 686 aa23.11■■□□□ 1.29
LMBR1-203ENST00000414218 TNFRSF25Q93038 417 aa23.11■■□□□ 1.29
LMBR1-203ENST00000414218 FDXACB1Q9BRP7 624 aaPredicted RBP23.11■■□□□ 1.29
LMBR1-203ENST00000414218 BRMS1Q9HCU9 246 aa23.11■■□□□ 1.29
LMBR1-203ENST00000414218 CYP26B1Q9NR63 512 aa23.11■■□□□ 1.29
LMBR1-203ENST00000414218 WRAP73Q9P2S5 460 aaPredicted RBP23.11■■□□□ 1.29
LMBR1-203ENST00000414218 PCDHGC5Q9Y5F6 944 aa23.11■■□□□ 1.29
LMBR1-203ENST00000414218 HOXA2O43364 376 aa23.1■■□□□ 1.29
LMBR1-203ENST00000414218 JAK2O60674 1132 aa23.1■■□□□ 1.29
LMBR1-203ENST00000414218 DKC1O60832 514 aaKnown RBP eCLIP23.1■■□□□ 1.29
LMBR1-203ENST00000414218 FGF18O76093 207 aa23.1■■□□□ 1.29
LMBR1-203ENST00000414218 BAG4O95429 457 aaKnown RBP23.1■■□□□ 1.29
LMBR1-203ENST00000414218 COL9A1P20849 921 aa23.1■■□□□ 1.29
LMBR1-203ENST00000414218 ADAM15Q13444 863 aa23.1■■□□□ 1.29
LMBR1-203ENST00000414218 EPHA7Q15375 998 aa23.1■■□□□ 1.29
LMBR1-203ENST00000414218 NCAPH2Q6IBW4 605 aa23.1■■□□□ 1.29
LMBR1-203ENST00000414218 LRRC55Q6ZSA7 311 aa23.1■■□□□ 1.29
LMBR1-203ENST00000414218 KSR1Q8IVT5 923 aa23.1■■□□□ 1.29
LMBR1-203ENST00000414218 THNSL1Q8IYQ7 743 aa23.1■■□□□ 1.29
LMBR1-203ENST00000414218 GJD3Q8N144 294 aa23.1■■□□□ 1.29
LMBR1-203ENST00000414218 ZNF579Q8NAF0 562 aaKnown RBP23.1■■□□□ 1.29
LMBR1-203ENST00000414218 PPP2R3CQ969Q6 453 aa23.1■■□□□ 1.29
LMBR1-203ENST00000414218 C1QTNF1Q9BXJ1 281 aa23.1■■□□□ 1.29
LMBR1-203ENST00000414218 RGL1Q9NZL6 768 aa23.1■■□□□ 1.29
LMBR1-203ENST00000414218 FAM50BQ9Y247 325 aa23.1■■□□□ 1.29
LMBR1-203ENST00000414218 TBX10O75333 385 aa23.09■■□□□ 1.29
LMBR1-203ENST00000414218 LAG3P18627 525 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms