RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 HOXD13P35453 343 aa6.56□□□□□ -1.36
CBX1P3-201ENST00000413296 HNF4AP41235 474 aa6.56□□□□□ -1.36
CBX1P3-201ENST00000413296 SEPHS1P49903 392 aa6.56□□□□□ -1.36
CBX1P3-201ENST00000413296 CASP6P55212 293 aa6.56□□□□□ -1.36
CBX1P3-201ENST00000413296 ARF3P61204 181 aaPredicted RBP6.56□□□□□ -1.36
CBX1P3-201ENST00000413296 PHC1P78364 1004 aa6.56□□□□□ -1.36
CBX1P3-201ENST00000413296 ARF1P84077 181 aaKnown RBP6.56□□□□□ -1.36
CBX1P3-201ENST00000413296 PLAURQ03405 335 aa6.56□□□□□ -1.36
CBX1P3-201ENST00000413296 TMED1Q13445 227 aa6.56□□□□□ -1.36
CBX1P3-201ENST00000413296 ERV3-1Q14264 604 aa6.56□□□□□ -1.36
CBX1P3-201ENST00000413296 TIGD6Q17RP2 521 aa6.56□□□□□ -1.36
CBX1P3-201ENST00000413296 SETMARQ53H47 684 aaPredicted RBP6.56□□□□□ -1.36
CBX1P3-201ENST00000413296 ODF2Q5BJF6 829 aa6.56□□□□□ -1.36
CBX1P3-201ENST00000413296 LRCH2Q5VUJ6 765 aa6.56□□□□□ -1.36
CBX1P3-201ENST00000413296 PHACTR4Q8IZ21 702 aa6.56□□□□□ -1.36
CBX1P3-201ENST00000413296 TRMT2AQ8IZ69 625 aaKnown RBP6.56□□□□□ -1.36
CBX1P3-201ENST00000413296 ADCY4Q8NFM4 1077 aa6.56□□□□□ -1.36
CBX1P3-201ENST00000413296 GOT1L1Q8NHS2 421 aaPredicted RBP6.56□□□□□ -1.36
CBX1P3-201ENST00000413296 GSDMBQ8TAX9 411 aa6.56□□□□□ -1.36
CBX1P3-201ENST00000413296 HERVK_113Q902F9 699 aa6.56□□□□□ -1.36
CBX1P3-201ENST00000413296 C1orf159Q96HA4 380 aa6.56□□□□□ -1.36
CBX1P3-201ENST00000413296 ORAI2Q96SN7 254 aa6.56□□□□□ -1.36
CBX1P3-201ENST00000413296 PI4K2AQ9BTU6 479 aa6.56□□□□□ -1.36
CBX1P3-201ENST00000413296 C22orf23Q9BZE7 217 aa6.56□□□□□ -1.36
CBX1P3-201ENST00000413296 SPON1Q9HCB6 807 aa6.56□□□□□ -1.36
CBX1P3-201ENST00000413296 PNPLA8Q9NP80 782 aa6.56□□□□□ -1.36
CBX1P3-201ENST00000413296 OBP2BQ9NPH6 170 aa6.56□□□□□ -1.36
CBX1P3-201ENST00000413296 CACNA2D2Q9NY47 1150 aa6.56□□□□□ -1.36
CBX1P3-201ENST00000413296 POGKQ9P215 609 aa6.56□□□□□ -1.36
CBX1P3-201ENST00000413296 TUBD1Q9UJT1 453 aa6.56□□□□□ -1.36
CBX1P3-201ENST00000413296 KCNH4Q9UQ05 1017 aa6.56□□□□□ -1.36
CBX1P3-201ENST00000413296 ATP6V0A2Q9Y487 856 aa6.56□□□□□ -1.36
CBX1P3-201ENST00000413296 ERICH4A6NGS2 130 aa6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 LGALS16A8MUM7 142 aa6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 PI4K2BG5E9Z4 385 aa6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 SYT5O00445 386 aa6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 RGS13O14921 159 aa6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 CLEC3AO75596 197 aa6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 ALDH1A1P00352 501 aa6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 GSTP1P09211 210 aaKnown RBP6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 SRGAP2CP0DJJ0 459 aa6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 PTPRAP18433 802 aa6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 ATP5F1P24539 256 aaPredicted RBP6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 PBX2P40425 430 aa6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 ECI1P42126 302 aa6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 CTSOP43234 321 aaPredicted RBP6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 RELBQ01201 579 aa6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 PDCD1Q15116 288 aa6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 SF3B3Q15393 1217 aaKnown RBP6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 SURF1Q15526 300 aa6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 PRSS53Q2L4Q9 553 aa6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 C5orf22Q49AR2 442 aa6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 UBXN11Q5T124 520 aa6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 GPR139Q6DWJ6 353 aa6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 MOGAT3Q86VF5 341 aa6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 COL23A1Q86Y22 540 aaPredicted RBP6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 ARHGEF39Q8N4T4 335 aa6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 RNF152Q8N8N0 203 aa6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 SPATA18Q8TC71 538 aa6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 GPBAR1Q8TDU6 330 aa6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 FNIP1Q8TF40 1166 aa6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 STON2Q8WXE9 905 aa6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 BSNDQ8WZ55 320 aa6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 ZNF566Q969W8 418 aa6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 ELMO3Q96BJ8 720 aa6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 COA7Q96BR5 231 aa6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 EYA3Q99504 573 aa6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 STK33Q9BYT3 514 aa6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 ZDHHC5Q9C0B5 715 aa6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 ZCCHC2Q9C0B9 1178 aaKnown RBP6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 C2orf40Q9H1Z8 148 aa6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 VPS33BQ9H267 617 aa6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 ZNF395Q9H8N7 513 aaPredicted RBP6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 PICK1Q9NRD5 415 aa6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 TMOD4Q9NZQ9 345 aa6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 ADD3Q9UEY8 706 aaKnown RBP6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 ZNF451Q9Y4E5 1061 aa6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 ZFP37Q9Y6Q3 630 aaPredicted RBP6.55□□□□□ -1.36
CBX1P3-201ENST00000413296 A0A1W2PNR3 127 aa6.54□□□□□ -1.36
CBX1P3-201ENST00000413296 FIGNL2A6NMB9 653 aa6.54□□□□□ -1.36
CBX1P3-201ENST00000413296 PLOD2O00469 737 aa6.54□□□□□ -1.36
CBX1P3-201ENST00000413296 FYB1O15117 783 aa6.54□□□□□ -1.36
CBX1P3-201ENST00000413296 NPC1O15118 1278 aa6.54□□□□□ -1.36
CBX1P3-201ENST00000413296 AKR1B10O60218 316 aa6.54□□□□□ -1.36
CBX1P3-201ENST00000413296 GOSR1O95249 250 aa6.54□□□□□ -1.36
CBX1P3-201ENST00000413296 ZNF865P0CJ78 1059 aaPredicted RBP6.54□□□□□ -1.36
CBX1P3-201ENST00000413296 ZSCAN22P10073 491 aaPredicted RBP6.54□□□□□ -1.36
CBX1P3-201ENST00000413296 HOXD8P13378 290 aaPredicted RBP6.54□□□□□ -1.36
CBX1P3-201ENST00000413296 SCG2P13521 617 aa6.54□□□□□ -1.36
CBX1P3-201ENST00000413296 OSMP13725 252 aa6.54□□□□□ -1.36
CBX1P3-201ENST00000413296 YBX3P16989 372 aaKnown RBP eCLIP6.54□□□□□ -1.36
CBX1P3-201ENST00000413296 IL11P20809 199 aa6.54□□□□□ -1.36
CBX1P3-201ENST00000413296 CD247P20963 164 aa6.54□□□□□ -1.36
CBX1P3-201ENST00000413296 SERPINF1P36955 418 aa6.54□□□□□ -1.36
CBX1P3-201ENST00000413296 MTNR1BP49286 362 aa6.54□□□□□ -1.36
CBX1P3-201ENST00000413296 CEBPAP49715 358 aaPredicted RBP6.54□□□□□ -1.36
CBX1P3-201ENST00000413296 CSE1LP55060 971 aaKnown RBP6.54□□□□□ -1.36
CBX1P3-201ENST00000413296 SRSF2Q01130 221 aaKnown RBP6.54□□□□□ -1.36
CBX1P3-201ENST00000413296 CREMQ03060 361 aa6.54□□□□□ -1.36
CBX1P3-201ENST00000413296 AP1B1Q10567 949 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms