RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 TRIM42Q8IWZ5 723 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 EPS8L3Q8TE67 593 aaKnown RBP6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 SERPINB12Q96P63 405 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 ZSCAN10Q96SZ4 725 aaPredicted RBP6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 CENPKQ9BS16 269 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 IL1RAPL1Q9NZN1 696 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 CAMTA1Q9Y6Y1 1673 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 RPTORQ8N122 1335 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 CNTNAP5Q8WYK1 1306 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 PVALEFA0A1B0GWK0 134 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 TRAFD1O14545 582 aaPredicted RBP6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 NKRFO15226 690 aaKnown RBP eCLIP6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 MAPK13O15264 365 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 RIPK2O43353 540 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 NOL4O94818 638 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 TMCC1O94876 653 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 GNA14O95837 355 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 FGGP02679 453 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 RARGP13631 454 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 YARSP54577 528 aaKnown RBP6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 PLTPP55058 493 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 METTL24Q5JXM2 366 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 GPIHBP1Q8IV16 184 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 PROCA1Q8NCQ7 364 aaPredicted RBP6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 UCMAQ8WVF2 138 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 HES6Q96HZ4 224 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 OLFM3Q96PB7 478 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 LRRC37BQ96QE4 947 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 SH3GLB2Q9NR46 395 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 AMFRQ9UKV5 643 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 INTUQ9ULD6 942 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 hCG_1642624A0A1W2PR95 340 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 SIGLEC16A6NMB1 481 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 PODXLO00592 558 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 MARK3P27448 753 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 STX2P32856 288 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 STRN3Q13033 797 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 IFIT5Q13325 482 aaKnown RBP6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 LRRC14Q15048 493 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 PFKFB3Q16875 520 aaPredicted RBP6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 ZC3H18Q86VM9 953 aaKnown RBP6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 VPS36Q86VN1 386 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 ECHDC2Q86YB7 292 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 BLIDQ8IZY5 108 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 FAM133AQ8N9E0 248 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 MGARPQ8TDB4 240 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 ZNF526Q8TF50 670 aaPredicted RBP6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 GATA6Q92908 595 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 ARHGEF2Q92974 986 aaKnown RBP6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 SPATA16Q9BXB7 569 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 MYLK2Q9H1R3 596 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 CARD9Q9H257 536 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 METTL14Q9HCE5 456 aaKnown RBP6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 COL4A3BPQ9Y5P4 624 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 USH1CQ9Y6N9 552 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 MYH1P12882 1939 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 PCDH11XQ9BZA7 1347 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 CYP27B1O15528 508 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 KCNA6P17658 529 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 RASA1P20936 1047 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 SCNN1BP51168 640 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 MCL1Q07820 350 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 MAP7Q14244 749 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 CNPY1Q3B7I2 92 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 SOGA3Q5TF21 947 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 PPP1R21Q6ZMI0 780 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 LRRC55Q6ZSA7 311 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 BARGINQ6ZT62 677 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 CEP128Q6ZU80 1094 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 UNC13DQ70J99 1090 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 TRMT10CQ7L0Y3 403 aaKnown RBP6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 NT5DC3Q86UY8 548 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 SMC1BQ8NDV3 1235 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 HAPLN3Q96S86 360 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 PLIN2Q99541 437 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 ARMT1Q9H993 441 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 STARD13Q9Y3M8 1113 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 CCDC194A0A1B0GVG4 234 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 PP2D1A8MPX8 630 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 H0Y3Z8 333 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 HSPA6P17066 643 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 GM2AP17900 193 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 MGAT5Q09328 741 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 MAPK7Q13164 816 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 RIC1Q4ADV7 1423 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 SNX30Q5VWJ9 437 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 ZDHHC24Q6UX98 284 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 JAMLQ86YT9 394 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 RNF168Q8IYW5 571 aaPredicted RBP6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 MAGEB6Q8N7X4 407 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 ENAHQ8N8S7 591 aaPredicted RBP6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 PHC3Q8NDX5 983 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 FBXO25Q8TCJ0 367 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 SCG3Q8WXD2 468 aaKnown RBP6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 ERP27Q96DN0 273 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 TBC1D10AQ9BXI6 508 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 NKIRAS1Q9NYS0 192 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 PCDHA4Q9UN74 947 aa6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.29□□□□□ -1.4
R3HDM1-202ENST00000409478 FLT1P17948 1338 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms