RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 RMDN3Q96TC7 470 aa16.6■□□□□ 0.25
SCAMP4-202ENST00000409472 STRA6Q9BX79 667 aa16.6■□□□□ 0.25
SCAMP4-202ENST00000409472 ODF2LQ9ULJ1 636 aa16.6■□□□□ 0.25
SCAMP4-202ENST00000409472 LRRN2O75325 713 aa16.59■□□□□ 0.25
SCAMP4-202ENST00000409472 USP14P54578 494 aa16.59■□□□□ 0.25
SCAMP4-202ENST00000409472 ZSCAN26Q16670 478 aa16.59■□□□□ 0.25
SCAMP4-202ENST00000409472 ARHGAP27Q6ZUM4 889 aa16.59■□□□□ 0.25
SCAMP4-202ENST00000409472 MCF2L2Q86YR7 1114 aa16.59■□□□□ 0.25
SCAMP4-202ENST00000409472 KCTD17Q8N5Z5 321 aa16.59■□□□□ 0.25
SCAMP4-202ENST00000409472 SPAG5Q96R06 1193 aa16.59■□□□□ 0.25
SCAMP4-202ENST00000409472 OSBPL9Q96SU4 736 aa16.59■□□□□ 0.25
SCAMP4-202ENST00000409472 PDCD2LQ9BRP1 358 aa16.59■□□□□ 0.25
SCAMP4-202ENST00000409472 MTFR1LQ9H019 292 aa16.59■□□□□ 0.25
SCAMP4-202ENST00000409472 NUCKS1Q9H1E3 243 aaKnown RBP16.59■□□□□ 0.25
SCAMP4-202ENST00000409472 GOLPH3Q9H4A6 298 aa16.59■□□□□ 0.25
SCAMP4-202ENST00000409472 ZCCHC17Q9NP64 241 aaKnown RBP16.59■□□□□ 0.25
SCAMP4-202ENST00000409472 PXMP2Q9NR77 195 aa16.59■□□□□ 0.25
SCAMP4-202ENST00000409472 PACSIN2Q9UNF0 486 aaPredicted RBP16.59■□□□□ 0.25
SCAMP4-202ENST00000409472 SSC5DA1L4H1 1573 aa16.59■□□□□ 0.25
SCAMP4-202ENST00000409472 KIAA1217Q5T5P2 1943 aa16.59■□□□□ 0.25
SCAMP4-202ENST00000409472 TESPA1A2RU30 521 aaPredicted RBP16.59■□□□□ 0.25
SCAMP4-202ENST00000409472 FZD9O00144 591 aa16.59■□□□□ 0.25
SCAMP4-202ENST00000409472 BACH1O14867 736 aa16.59■□□□□ 0.25
SCAMP4-202ENST00000409472 ATP8B1O43520 1251 aa16.59■□□□□ 0.25
SCAMP4-202ENST00000409472 FTCDO95954 541 aa16.59■□□□□ 0.25
SCAMP4-202ENST00000409472 JAM2P57087 298 aa16.59■□□□□ 0.25
SCAMP4-202ENST00000409472 RNF207Q6ZRF8 634 aa16.59■□□□□ 0.25
SCAMP4-202ENST00000409472 NLGN2Q8NFZ4 835 aa16.59■□□□□ 0.25
SCAMP4-202ENST00000409472 OLIG1Q8TAK6 271 aa16.59■□□□□ 0.25
SCAMP4-202ENST00000409472 UBXN6Q9BZV1 441 aa16.59■□□□□ 0.25
SCAMP4-202ENST00000409472 GBP3Q9H0R5 595 aa16.59■□□□□ 0.25
SCAMP4-202ENST00000409472 METTL14Q9HCE5 456 aaKnown RBP16.59■□□□□ 0.25
SCAMP4-202ENST00000409472 RNF146Q9NTX7 359 aa16.59■□□□□ 0.25
SCAMP4-202ENST00000409472 WDR81Q562E7 1941 aa16.58■□□□□ 0.25
SCAMP4-202ENST00000409472 H3BQF6 201 aa16.58■□□□□ 0.25
SCAMP4-202ENST00000409472 SORBS3O60504 671 aa16.58■□□□□ 0.25
SCAMP4-202ENST00000409472 PEX10O60683 326 aa16.58■□□□□ 0.25
SCAMP4-202ENST00000409472 P4HBP07237 508 aaKnown RBP16.58■□□□□ 0.25
SCAMP4-202ENST00000409472 MYBL2P10244 700 aa16.58■□□□□ 0.25
SCAMP4-202ENST00000409472 PTPRAP18433 802 aa16.58■□□□□ 0.25
SCAMP4-202ENST00000409472 PSMC2P35998 433 aaKnown RBP16.58■□□□□ 0.25
SCAMP4-202ENST00000409472 NAP1L1P55209 391 aaKnown RBP16.58■□□□□ 0.25
SCAMP4-202ENST00000409472 BACE1P56817 501 aa16.58■□□□□ 0.25
SCAMP4-202ENST00000409472 BAATQ14032 418 aaPredicted RBP16.58■□□□□ 0.25
SCAMP4-202ENST00000409472 R3HDM1Q15032 1099 aaKnown RBP16.58■□□□□ 0.25
SCAMP4-202ENST00000409472 PTPROQ16827 1216 aa16.58■□□□□ 0.25
SCAMP4-202ENST00000409472 GBP6Q6ZN66 633 aa16.58■□□□□ 0.25
SCAMP4-202ENST00000409472 SCYL3Q8IZE3 742 aa16.58■□□□□ 0.25
SCAMP4-202ENST00000409472 MS4A14Q96JA4 679 aa16.58■□□□□ 0.25
SCAMP4-202ENST00000409472 PCIF1Q9H4Z3 704 aa16.58■□□□□ 0.25
SCAMP4-202ENST00000409472 DMAC2Q9NW81 257 aa16.58■□□□□ 0.25
SCAMP4-202ENST00000409472 POLR3GO15318 223 aaPredicted RBP16.58■□□□□ 0.24
SCAMP4-202ENST00000409472 PALMO75781 387 aa16.58■□□□□ 0.24
SCAMP4-202ENST00000409472 MUTP22033 750 aa16.58■□□□□ 0.24
SCAMP4-202ENST00000409472 NPEPPSP55786 919 aa16.58■□□□□ 0.24
SCAMP4-202ENST00000409472 DLG4P78352 724 aa16.58■□□□□ 0.24
SCAMP4-202ENST00000409472 KIAA0753Q2KHM9 967 aa16.58■□□□□ 0.24
SCAMP4-202ENST00000409472 HDAC7Q8WUI4 952 aa16.58■□□□□ 0.24
SCAMP4-202ENST00000409472 ALS2CR12Q96Q35 445 aa16.58■□□□□ 0.24
SCAMP4-202ENST00000409472 SEL1LQ9UBV2 794 aa16.58■□□□□ 0.24
SCAMP4-202ENST00000409472 LOC102724159A0A0B4J2E5 919 aa16.57■□□□□ 0.24
SCAMP4-202ENST00000409472 MAP2K7O14733 419 aa16.57■□□□□ 0.24
SCAMP4-202ENST00000409472 YWHABP31946 246 aaKnown RBP16.57■□□□□ 0.24
SCAMP4-202ENST00000409472 FMO5P49326 533 aa16.57■□□□□ 0.24
SCAMP4-202ENST00000409472 PRKG1Q13976 671 aa16.57■□□□□ 0.24
SCAMP4-202ENST00000409472 PWP2Q15269 919 aaKnown RBP16.57■□□□□ 0.24
SCAMP4-202ENST00000409472 NIPA1Q7RTP0 329 aa16.57■□□□□ 0.24
SCAMP4-202ENST00000409472 REPS2Q8NFH8 660 aa16.57■□□□□ 0.24
SCAMP4-202ENST00000409472 GOLGA5Q8TBA6 731 aa16.57■□□□□ 0.24
SCAMP4-202ENST00000409472 HNRNPLLQ8WVV9 542 aaKnown RBP16.57■□□□□ 0.24
SCAMP4-202ENST00000409472 NOX5Q96PH1 765 aa16.57■□□□□ 0.24
SCAMP4-202ENST00000409472 CBWD1Q9BRT8 395 aa16.57■□□□□ 0.24
SCAMP4-202ENST00000409472 KIFC3Q9BVG8 833 aa16.57■□□□□ 0.24
SCAMP4-202ENST00000409472 KCND2Q9NZV8 630 aa16.57■□□□□ 0.24
SCAMP4-202ENST00000409472 POTEB2H3BUK9 544 aa16.57■□□□□ 0.24
SCAMP4-202ENST00000409472 OAS2P29728 719 aaKnown RBP16.57■□□□□ 0.24
SCAMP4-202ENST00000409472 QARSP47897 775 aaKnown RBP16.57■□□□□ 0.24
SCAMP4-202ENST00000409472 SOX10P56693 466 aa16.57■□□□□ 0.24
SCAMP4-202ENST00000409472 NAB2Q15742 525 aa16.57■□□□□ 0.24
SCAMP4-202ENST00000409472 SNRNP48Q6IEG0 339 aaKnown RBP16.57■□□□□ 0.24
SCAMP4-202ENST00000409472 HS2ST1Q7LGA3 356 aa16.57■□□□□ 0.24
SCAMP4-202ENST00000409472 GDAP1L1Q96MZ0 367 aa16.57■□□□□ 0.24
SCAMP4-202ENST00000409472 L1RE1Q9UN81 338 aa16.57■□□□□ 0.24
SCAMP4-202ENST00000409472 LCTP09848 1927 aa16.57■□□□□ 0.24
SCAMP4-202ENST00000409472 UBE4BO95155 1302 aa16.56■□□□□ 0.24
SCAMP4-202ENST00000409472 ZBED4O75132 1171 aa16.56■□□□□ 0.24
SCAMP4-202ENST00000409472 GFPT2O94808 682 aa16.56■□□□□ 0.24
SCAMP4-202ENST00000409472 MATR3P43243 847 aaKnown RBP eCLIP16.56■□□□□ 0.24
SCAMP4-202ENST00000409472 CKAP4Q07065 602 aaKnown RBP16.56■□□□□ 0.24
SCAMP4-202ENST00000409472 NFIL3Q16649 462 aa16.56■□□□□ 0.24
SCAMP4-202ENST00000409472 ARHGEF16Q5VV41 709 aa16.56■□□□□ 0.24
SCAMP4-202ENST00000409472 SRLQ86TD4 932 aa16.56■□□□□ 0.24
SCAMP4-202ENST00000409472 SYCP3Q8IZU3 236 aa16.56■□□□□ 0.24
SCAMP4-202ENST00000409472 ZNF280CQ8ND82 737 aa16.56■□□□□ 0.24
SCAMP4-202ENST00000409472 NEK9Q8TD19 979 aa16.56■□□□□ 0.24
SCAMP4-202ENST00000409472 SGIP1Q9BQI5 828 aa16.56■□□□□ 0.24
SCAMP4-202ENST00000409472 GPR88Q9GZN0 384 aa16.56■□□□□ 0.24
SCAMP4-202ENST00000409472 ZNF214Q9UL59 606 aaPredicted RBP16.56■□□□□ 0.24
SCAMP4-202ENST00000409472 RGS20O76081 388 aa16.56■□□□□ 0.24
SCAMP4-202ENST00000409472 SMC1AQ14683 1233 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms