RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 GUCY1B3Q02153 619 aa6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 PRKCEQ02156 737 aa6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 CCDC85BQ15834 202 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 TMEM266Q2M3C6 531 aa6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 Q4G0T1 1027 aa6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 FBXO47Q5MNV8 452 aa6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 KRT40Q6A162 431 aa6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 GALNT17Q6IS24 598 aa6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 MIER3Q7Z3K6 550 aa6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 NEK8Q86SG6 692 aa6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 RPAINQ86UA6 219 aa6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 RSPH3Q86UC2 560 aa6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 SMAP1Q8IYB5 467 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 MICALL1Q8N3F8 863 aa6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 RDH13Q8NBN7 331 aa6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 ETNPPLQ8TBG4 499 aa6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 MBOAT7Q96N66 472 aa6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 GAS2L1Q99501 681 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 SH2D3AQ9BRG2 576 aa6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 IFIH1Q9BYX4 1025 aaKnown RBP6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 C22orf23Q9BZE7 217 aa6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 AGO3Q9H9G7 860 aaKnown RBP6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 DDX25Q9UHL0 483 aaKnown RBP6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 GINS2Q9Y248 185 aa6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 PCDHA2Q9Y5H9 948 aa6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 MAFBQ9Y5Q3 323 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 TRPV2Q9Y5S1 764 aa6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 IGSF9BQ9UPX0 1349 aa6.5□□□□□ -1.37
HMGB1P20-201ENST00000402555 COL1A2P08123 1366 aa6.5□□□□□ -1.37
HMGB1P20-201ENST00000402555 SMIM35A0A1B0GVV1 85 aa6.5□□□□□ -1.37
HMGB1P20-201ENST00000402555 LINC01553A4QN01 128 aa6.5□□□□□ -1.37
HMGB1P20-201ENST00000402555 BTBD18B2RXH4 712 aa6.5□□□□□ -1.37
HMGB1P20-201ENST00000402555 EML1O00423 815 aa6.5□□□□□ -1.37
HMGB1P20-201ENST00000402555 WNT7AO00755 349 aa6.5□□□□□ -1.37
HMGB1P20-201ENST00000402555 CCNT1O60563 726 aaKnown RBP6.5□□□□□ -1.37
HMGB1P20-201ENST00000402555 EIF5BO60841 1220 aaKnown RBP6.5□□□□□ -1.37
HMGB1P20-201ENST00000402555 EFCAB14O75071 495 aa6.5□□□□□ -1.37
HMGB1P20-201ENST00000402555 C22orf31O95567 290 aa6.5□□□□□ -1.37
HMGB1P20-201ENST00000402555 VTNP04004 478 aa6.5□□□□□ -1.37
HMGB1P20-201ENST00000402555 XBP1P17861 261 aa6.5□□□□□ -1.37
HMGB1P20-201ENST00000402555 KRT2P35908 639 aa6.5□□□□□ -1.37
HMGB1P20-201ENST00000402555 GCGRP47871 477 aa6.5□□□□□ -1.37
HMGB1P20-201ENST00000402555 SLC26A2P50443 739 aa6.5□□□□□ -1.37
HMGB1P20-201ENST00000402555 CLCN3P51790 818 aa6.5□□□□□ -1.37
HMGB1P20-201ENST00000402555 JAK3P52333 1124 aa6.5□□□□□ -1.37
HMGB1P20-201ENST00000402555 ZNF484Q5JVG2 852 aa6.5□□□□□ -1.37
HMGB1P20-201ENST00000402555 PLA2G2CQ5R387 149 aa6.5□□□□□ -1.37
HMGB1P20-201ENST00000402555 IER5Q5VY09 327 aa6.5□□□□□ -1.37
HMGB1P20-201ENST00000402555 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.5□□□□□ -1.37
HMGB1P20-201ENST00000402555 DIS3L2Q8IYB7 885 aaKnown RBP6.5□□□□□ -1.37
HMGB1P20-201ENST00000402555 KIAA0319LQ8IZA0 1049 aa6.5□□□□□ -1.37
HMGB1P20-201ENST00000402555 FAM177A1Q8N128 213 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P20-201ENST00000402555 LRRC71Q8N4P6 559 aa6.5□□□□□ -1.37
HMGB1P20-201ENST00000402555 METTL13Q8N6R0 699 aa6.5□□□□□ -1.37
HMGB1P20-201ENST00000402555 BANK1Q8NDB2 785 aa6.5□□□□□ -1.37
HMGB1P20-201ENST00000402555 GDPD5Q8WTR4 605 aa6.5□□□□□ -1.37
HMGB1P20-201ENST00000402555 LINC01599Q8WXQ3 324 aa6.5□□□□□ -1.37
HMGB1P20-201ENST00000402555 WASF1Q92558 559 aa6.5□□□□□ -1.37
HMGB1P20-201ENST00000402555 TNPO1Q92973 898 aaKnown RBP6.5□□□□□ -1.37
HMGB1P20-201ENST00000402555 TNFRSF25Q93038 417 aa6.5□□□□□ -1.37
HMGB1P20-201ENST00000402555 THAP11Q96EK4 314 aa6.5□□□□□ -1.37
HMGB1P20-201ENST00000402555 ZNF668Q96K58 619 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P20-201ENST00000402555 RIT2Q99578 217 aa6.5□□□□□ -1.37
HMGB1P20-201ENST00000402555 SPSB2Q99619 263 aa6.5□□□□□ -1.37
HMGB1P20-201ENST00000402555 RAD9AQ99638 391 aa6.5□□□□□ -1.37
HMGB1P20-201ENST00000402555 CELF4Q9BZC1 486 aaKnown RBP6.5□□□□□ -1.37
HMGB1P20-201ENST00000402555 LIMCH1Q9UPQ0 1083 aa6.5□□□□□ -1.37
HMGB1P20-201ENST00000402555 COL4A4P53420 1690 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P20-201ENST00000402555 TTC3P53804 2025 aa6.49□□□□□ -1.37
HMGB1P20-201ENST00000402555 M0QZ92 97 aa6.49□□□□□ -1.37
HMGB1P20-201ENST00000402555 ENPP3O14638 875 aa6.49□□□□□ -1.37
HMGB1P20-201ENST00000402555 STBD1O95210 358 aa6.49□□□□□ -1.37
HMGB1P20-201ENST00000402555 MMP1P03956 469 aa6.49□□□□□ -1.37
HMGB1P20-201ENST00000402555 ATP2B1P20020 1258 aa6.49□□□□□ -1.37
HMGB1P20-201ENST00000402555 SFNP31947 248 aa6.49□□□□□ -1.37
HMGB1P20-201ENST00000402555 HTRA4P83105 476 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P20-201ENST00000402555 GRB10Q13322 594 aa6.49□□□□□ -1.37
HMGB1P20-201ENST00000402555 TRIM29Q14134 588 aa6.49□□□□□ -1.37
HMGB1P20-201ENST00000402555 KIZQ2M2Z5 673 aa6.49□□□□□ -1.37
HMGB1P20-201ENST00000402555 MTERF2Q49AM1 385 aa6.49□□□□□ -1.37
HMGB1P20-201ENST00000402555 MOXD1Q6UVY6 613 aa6.49□□□□□ -1.37
HMGB1P20-201ENST00000402555 B3GNT9Q6UX72 402 aa6.49□□□□□ -1.37
HMGB1P20-201ENST00000402555 TSHZ1Q6ZSZ6 1077 aa6.49□□□□□ -1.37
HMGB1P20-201ENST00000402555 RTN4RL1Q86UN2 441 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P20-201ENST00000402555 TMEM40Q8WWA1 233 aa6.49□□□□□ -1.37
HMGB1P20-201ENST00000402555 HAS1Q92839 578 aa6.49□□□□□ -1.37
HMGB1P20-201ENST00000402555 APBB2Q92870 758 aa6.49□□□□□ -1.37
HMGB1P20-201ENST00000402555 TOP1MTQ969P6 601 aa6.49□□□□□ -1.37
HMGB1P20-201ENST00000402555 FAM167AQ96KS9 214 aa6.49□□□□□ -1.37
HMGB1P20-201ENST00000402555 YME1L1Q96TA2 773 aa6.49□□□□□ -1.37
HMGB1P20-201ENST00000402555 OSMRQ99650 979 aa6.49□□□□□ -1.37
HMGB1P20-201ENST00000402555 C17orf80Q9BSJ5 609 aa6.49□□□□□ -1.37
HMGB1P20-201ENST00000402555 TMX1Q9H3N1 280 aa6.49□□□□□ -1.37
HMGB1P20-201ENST00000402555 BRMS1Q9HCU9 246 aa6.49□□□□□ -1.37
HMGB1P20-201ENST00000402555 KCNMB3Q9NPA1 279 aa6.49□□□□□ -1.37
HMGB1P20-201ENST00000402555 VAV3Q9UKW4 847 aa6.49□□□□□ -1.37
HMGB1P20-201ENST00000402555 PADI3Q9ULW8 664 aa6.49□□□□□ -1.37
HMGB1P20-201ENST00000402555 NOC2LQ9Y3T9 749 aaKnown RBP6.49□□□□□ -1.37
HMGB1P20-201ENST00000402555 VCANP13611 3396 aa6.48□□□□□ -1.37
HMGB1P20-201ENST00000402555 MARCH6O60337 910 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms