RNA–Protein interactions for RNA: ENST00000400301.5

USP48-204, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 4,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-204ENST00000400301 NID2Q14112 1375 aa20■□□□□ 0.79
USP48-204ENST00000400301 DDTLA6NHG4 134 aaPredicted RBP20■□□□□ 0.79
USP48-204ENST00000400301 NEBLO76041 1014 aa20■□□□□ 0.79
USP48-204ENST00000400301 PAGR1Q9BTK6 254 aa20■□□□□ 0.79
USP48-204ENST00000400301 TBC1D22BQ9NU19 505 aa20■□□□□ 0.79
USP48-204ENST00000400301 ZNF148Q9UQR1 794 aa20■□□□□ 0.79
USP48-204ENST00000400301 GINS2Q9Y248 185 aa20■□□□□ 0.79
USP48-204ENST00000400301 EZH2Q15910 746 aaKnown RBP20■□□□□ 0.79
USP48-204ENST00000400301 GJB7Q6PEY0 223 aa20■□□□□ 0.79
USP48-204ENST00000400301 CAPN12Q6ZSI9 719 aa20■□□□□ 0.79
USP48-204ENST00000400301 IRF2BP1Q8IU81 584 aa20■□□□□ 0.79
USP48-204ENST00000400301 PSD3Q9NYI0 1048 aa20■□□□□ 0.79
USP48-204ENST00000400301 KDM4FA0A1W2PPD8 638 aa20■□□□□ 0.79
USP48-204ENST00000400301 WDR64B1ANS9 1081 aa20■□□□□ 0.79
USP48-204ENST00000400301 RUBCNQ92622 972 aa20■□□□□ 0.79
USP48-204ENST00000400301 MTMR9Q96QG7 549 aa20■□□□□ 0.79
USP48-204ENST00000400301 STK33Q9BYT3 514 aa20■□□□□ 0.79
USP48-204ENST00000400301 BUB1BO60566 1050 aaPredicted RBP19.99■□□□□ 0.79
USP48-204ENST00000400301 HAUS6Q7Z4H7 955 aa19.99■□□□□ 0.79
USP48-204ENST00000400301 MED15Q96RN5 788 aa19.99■□□□□ 0.79
USP48-204ENST00000400301 RUSC1Q9BVN2 902 aa19.99■□□□□ 0.79
USP48-204ENST00000400301 CCND2P30279 289 aa19.99■□□□□ 0.79
USP48-204ENST00000400301 IRX3P78415 501 aaPredicted RBP19.99■□□□□ 0.79
USP48-204ENST00000400301 NPY5RQ15761 445 aa19.99■□□□□ 0.79
USP48-204ENST00000400301 CIAPIN1Q6FI81 312 aa19.99■□□□□ 0.79
USP48-204ENST00000400301 WDR59Q6PJI9 974 aa19.99■□□□□ 0.79
USP48-204ENST00000400301 SAAL1Q96ER3 474 aa19.99■□□□□ 0.79
USP48-204ENST00000400301 DIS3Q9Y2L1 958 aaKnown RBP19.99■□□□□ 0.79
USP48-204ENST00000400301 SPATA31A6Q5VVP1 1343 aa19.99■□□□□ 0.79
USP48-204ENST00000400301 RWDD2BP57060 319 aa19.99■□□□□ 0.79
USP48-204ENST00000400301 BRDTQ58F21 947 aaPredicted RBP19.99■□□□□ 0.79
USP48-204ENST00000400301 GLIS3Q8NEA6 775 aa19.99■□□□□ 0.79
USP48-204ENST00000400301 SYNGAP1Q96PV0 1343 aa19.98■□□□□ 0.79
USP48-204ENST00000400301 ALDH3A1P30838 453 aa19.98■□□□□ 0.79
USP48-204ENST00000400301 EIF3BP55884 814 aaKnown RBP19.98■□□□□ 0.79
USP48-204ENST00000400301 TRIP13Q15645 432 aaPredicted RBP19.98■□□□□ 0.79
USP48-204ENST00000400301 ZDHHC15Q96MV8 337 aa19.98■□□□□ 0.79
USP48-204ENST00000400301 PACSIN1Q9BY11 444 aa19.98■□□□□ 0.79
USP48-204ENST00000400301 FAM169AQ9Y6X4 670 aa19.98■□□□□ 0.79
USP48-204ENST00000400301 SPEF2Q9C093 1822 aa19.98■□□□□ 0.79
USP48-204ENST00000400301 DENND3A2RUS2 1198 aa19.98■□□□□ 0.79
USP48-204ENST00000400301 ZNF233A6NK53 670 aa19.98■□□□□ 0.79
USP48-204ENST00000400301 KRT14P02533 472 aa19.98■□□□□ 0.79
USP48-204ENST00000400301 TMOD1P28289 359 aa19.98■□□□□ 0.79
USP48-204ENST00000400301 CASP4P49662 377 aa19.98■□□□□ 0.79
USP48-204ENST00000400301 GIT2Q14161 759 aa19.98■□□□□ 0.79
USP48-204ENST00000400301 TRIM59Q8IWR1 403 aa19.98■□□□□ 0.79
USP48-204ENST00000400301 FERMT1Q9BQL6 677 aa19.98■□□□□ 0.79
USP48-204ENST00000400301 SLITRK6Q9H5Y7 841 aa19.98■□□□□ 0.79
USP48-204ENST00000400301 CNOT8Q9UFF9 292 aaKnown RBP19.98■□□□□ 0.79
USP48-204ENST00000400301 RAD51CO43502 376 aa19.98■□□□□ 0.79
USP48-204ENST00000400301 RINT1Q6NUQ1 792 aa19.98■□□□□ 0.79
USP48-204ENST00000400301 ZBTB8OSQ8IWT0 167 aa19.98■□□□□ 0.79
USP48-204ENST00000400301 MTMR8Q96EF0 704 aa19.98■□□□□ 0.79
USP48-204ENST00000400301 CDHR1Q96JP9 859 aa19.98■□□□□ 0.79
USP48-204ENST00000400301 APEX2Q9UBZ4 518 aa19.98■□□□□ 0.79
USP48-204ENST00000400301 NAGPAQ9UK23 515 aa19.98■□□□□ 0.79
USP48-204ENST00000400301 SERPINA10Q9UK55 444 aa19.98■□□□□ 0.79
USP48-204ENST00000400301 FBXL5Q9UKA1 691 aa19.98■□□□□ 0.79
USP48-204ENST00000400301 ODF2LQ9ULJ1 636 aa19.98■□□□□ 0.79
USP48-204ENST00000400301 JAK3P52333 1124 aa19.98■□□□□ 0.79
USP48-204ENST00000400301 PSMC6P62333 389 aa19.98■□□□□ 0.79
USP48-204ENST00000400301 RNPC3Q96LT9 517 aaKnown RBP19.98■□□□□ 0.79
USP48-204ENST00000400301 PARP4Q9UKK3 1724 aaKnown RBP19.97■□□□□ 0.79
USP48-204ENST00000400301 ARFGEF2Q9Y6D5 1785 aa19.97■□□□□ 0.79
USP48-204ENST00000400301 ECM2O94769 699 aaPredicted RBP19.97■□□□□ 0.79
USP48-204ENST00000400301 PPP2R5AQ15172 486 aa19.97■□□□□ 0.79
USP48-204ENST00000400301 TMEM119Q4V9L6 283 aa19.97■□□□□ 0.79
USP48-204ENST00000400301 FBF1Q8TES7 1133 aa19.97■□□□□ 0.79
USP48-204ENST00000400301 TRIM11Q96F44 468 aa19.97■□□□□ 0.79
USP48-204ENST00000400301 ZBTB12Q9Y330 459 aaPredicted RBP19.97■□□□□ 0.79
USP48-204ENST00000400301 PRLRP16471 622 aa19.97■□□□□ 0.79
USP48-204ENST00000400301 SEPT14Q6ZU15 432 aa19.97■□□□□ 0.79
USP48-204ENST00000400301 SLC35G2Q8TBE7 412 aa19.97■□□□□ 0.79
USP48-204ENST00000400301 ATP6V1G3Q96LB4 118 aa19.97■□□□□ 0.79
USP48-204ENST00000400301 NRBP2Q9NSY0 501 aa19.97■□□□□ 0.79
USP48-204ENST00000400301 ANAPC7Q9UJX3 599 aa19.97■□□□□ 0.79
USP48-204ENST00000400301 HHATQ5VTY9 493 aa19.97■□□□□ 0.79
USP48-204ENST00000400301 MOXD1Q6UVY6 613 aa19.97■□□□□ 0.79
USP48-204ENST00000400301 ARHGAP27Q6ZUM4 889 aa19.97■□□□□ 0.79
USP48-204ENST00000400301 METTL13Q8N6R0 699 aa19.97■□□□□ 0.79
USP48-204ENST00000400301 CCDC89Q8N998 374 aa19.97■□□□□ 0.79
USP48-204ENST00000400301 POLR3CQ9BUI4 534 aaPredicted RBP19.97■□□□□ 0.79
USP48-204ENST00000400301 DNAJC17Q9NVM6 304 aaKnown RBP19.97■□□□□ 0.79
USP48-204ENST00000400301 SCN11AQ9UI33 1791 aa19.97■□□□□ 0.79
USP48-204ENST00000400301 PSAPP07602 524 aa19.96■□□□□ 0.79
USP48-204ENST00000400301 TMEM191BP0C7N4 346 aa19.96■□□□□ 0.79
USP48-204ENST00000400301 TAL1P17542 331 aaPredicted RBP19.96■□□□□ 0.79
USP48-204ENST00000400301 ANXA13P27216 316 aa19.96■□□□□ 0.79
USP48-204ENST00000400301 VSIG1Q86XK7 387 aa19.96■□□□□ 0.79
USP48-204ENST00000400301 CCDC13Q8IYE1 715 aa19.96■□□□□ 0.79
USP48-204ENST00000400301 USP38Q8NB14 1042 aa19.96■□□□□ 0.79
USP48-204ENST00000400301 ACER1Q8TDN7 264 aa19.96■□□□□ 0.79
USP48-204ENST00000400301 AGPAT1Q99943 283 aa19.96■□□□□ 0.79
USP48-204ENST00000400301 ABCC6O95255 1503 aa19.96■□□□□ 0.79
USP48-204ENST00000400301 RASGRF2O14827 1237 aa19.96■□□□□ 0.79
USP48-204ENST00000400301 PON1P27169 355 aa19.96■□□□□ 0.79
USP48-204ENST00000400301 BAG6P46379 1132 aa19.96■□□□□ 0.79
USP48-204ENST00000400301 KRT76Q01546 638 aa19.96■□□□□ 0.79
USP48-204ENST00000400301 BFSP1Q12934 665 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms