RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 GOLGA8HP0CJ92 632 aa10.67□□□□□ -0.7
PTPRM-203ENST00000400060 FKBP3Q00688 224 aaKnown RBP10.67□□□□□ -0.7
PTPRM-203ENST00000400060 EXOSC10Q01780 885 aaKnown RBP10.67□□□□□ -0.7
PTPRM-203ENST00000400060 PTGDRQ13258 359 aa10.67□□□□□ -0.7
PTPRM-203ENST00000400060 CNGA3Q16281 694 aa10.67□□□□□ -0.7
PTPRM-203ENST00000400060 CCT6BQ92526 530 aa10.67□□□□□ -0.7
PTPRM-203ENST00000400060 PLEKHG4BQ96PX9 1271 aa10.67□□□□□ -0.7
PTPRM-203ENST00000400060 TTC1Q99614 292 aa10.67□□□□□ -0.7
PTPRM-203ENST00000400060 CHP1Q99653 195 aa10.67□□□□□ -0.7
PTPRM-203ENST00000400060 EURLQ9NYK6 297 aa10.67□□□□□ -0.7
PTPRM-203ENST00000400060 ZFYVE16Q7Z3T8 1539 aa10.67□□□□□ -0.7
PTPRM-203ENST00000400060 SP100P23497 879 aaPredicted RBP10.67□□□□□ -0.7
PTPRM-203ENST00000400060 PPARGP37231 505 aaPredicted RBP10.67□□□□□ -0.7
PTPRM-203ENST00000400060 EIF4A1P60842 406 aaKnown RBP10.67□□□□□ -0.7
PTPRM-203ENST00000400060 DPYDQ12882 1025 aa10.67□□□□□ -0.7
PTPRM-203ENST00000400060 NONOQ15233 471 aaKnown RBP eCLIP10.67□□□□□ -0.7
PTPRM-203ENST00000400060 UNC13DQ70J99 1090 aa10.67□□□□□ -0.7
PTPRM-203ENST00000400060 SMYD4Q8IYR2 804 aaPredicted RBP10.67□□□□□ -0.7
PTPRM-203ENST00000400060 SMCR8Q8TEV9 937 aaPredicted RBP10.67□□□□□ -0.7
PTPRM-203ENST00000400060 IFT122Q9HBG6 1241 aa10.67□□□□□ -0.7
PTPRM-203ENST00000400060 VPS54Q9P1Q0 977 aa10.67□□□□□ -0.7
PTPRM-203ENST00000400060 FBXO2Q9UK22 296 aaPredicted RBP10.67□□□□□ -0.7
PTPRM-203ENST00000400060 SOS2Q07890 1332 aaPredicted RBP10.67□□□□□ -0.7
PTPRM-203ENST00000400060 LRRC53A6NM62 1247 aa10.67□□□□□ -0.7
PTPRM-203ENST00000400060 MATN2O00339 956 aa10.67□□□□□ -0.7
PTPRM-203ENST00000400060 TBC1D12O60347 775 aa10.67□□□□□ -0.7
PTPRM-203ENST00000400060 CLPTM1O96005 669 aa10.67□□□□□ -0.7
PTPRM-203ENST00000400060 KRT8P05787 483 aa10.67□□□□□ -0.7
PTPRM-203ENST00000400060 ACCSLQ4AC99 568 aa10.67□□□□□ -0.7
PTPRM-203ENST00000400060 AKNAD1Q5T1N1 836 aa10.67□□□□□ -0.7
PTPRM-203ENST00000400060 FAM47EQ6ZV65 393 aa10.67□□□□□ -0.7
PTPRM-203ENST00000400060 QRICH2Q9H0J4 1663 aa10.67□□□□□ -0.7
PTPRM-203ENST00000400060 KRT10P13645 584 aa10.67□□□□□ -0.7
PTPRM-203ENST00000400060 ADD1P35611 737 aaKnown RBP10.67□□□□□ -0.7
PTPRM-203ENST00000400060 ZNF844Q08AG5 666 aa10.67□□□□□ -0.7
PTPRM-203ENST00000400060 SPIDRQ14159 915 aa10.67□□□□□ -0.7
PTPRM-203ENST00000400060 SGO2Q562F6 1265 aa10.67□□□□□ -0.7
PTPRM-203ENST00000400060 ZNF654Q8IZM8 581 aa10.67□□□□□ -0.7
PTPRM-203ENST00000400060 FANCBQ8NB91 859 aa10.67□□□□□ -0.7
PTPRM-203ENST00000400060 SCG3Q8WXD2 468 aaKnown RBP10.67□□□□□ -0.7
PTPRM-203ENST00000400060 KLHL4Q9C0H6 718 aa10.67□□□□□ -0.7
PTPRM-203ENST00000400060 GRIN2DO15399 1336 aa10.66□□□□□ -0.7
PTPRM-203ENST00000400060 AREL1O15033 823 aa10.66□□□□□ -0.7
PTPRM-203ENST00000400060 PHF2O75151 1096 aa10.66□□□□□ -0.7
PTPRM-203ENST00000400060 TTC4O95801 387 aa10.66□□□□□ -0.7
PTPRM-203ENST00000400060 MT-ND3P03897 115 aa10.66□□□□□ -0.7
PTPRM-203ENST00000400060 RAP1GDS1P52306 607 aa10.66□□□□□ -0.7
PTPRM-203ENST00000400060 TFAP4Q01664 338 aa10.66□□□□□ -0.7
PTPRM-203ENST00000400060 TRIM16LQ309B1 348 aa10.66□□□□□ -0.7
PTPRM-203ENST00000400060 ERICH1Q86X53 443 aa10.66□□□□□ -0.7
PTPRM-203ENST00000400060 PLBD2Q8NHP8 589 aa10.66□□□□□ -0.7
PTPRM-203ENST00000400060 CMTM5Q96DZ9 223 aa10.66□□□□□ -0.7
PTPRM-203ENST00000400060 SNF8Q96H20 258 aa10.66□□□□□ -0.7
PTPRM-203ENST00000400060 FHDC1Q9C0D6 1143 aaPredicted RBP10.66□□□□□ -0.7
PTPRM-203ENST00000400060 NDEL1Q9GZM8 345 aa10.66□□□□□ -0.7
PTPRM-203ENST00000400060 SNX24Q9Y343 169 aa10.66□□□□□ -0.7
PTPRM-203ENST00000400060 V9GY48 417 aaPredicted RBP10.66□□□□□ -0.7
PTPRM-203ENST00000400060 ERBB3P21860 1342 aa10.66□□□□□ -0.7
PTPRM-203ENST00000400060 TMEM120BA0PK00 339 aa10.66□□□□□ -0.7
PTPRM-203ENST00000400060 ZPR1O75312 459 aa10.66□□□□□ -0.7
PTPRM-203ENST00000400060 LDHCP07864 332 aa10.66□□□□□ -0.7
PTPRM-203ENST00000400060 ACTN1P12814 892 aa10.66□□□□□ -0.7
PTPRM-203ENST00000400060 POLR2EP19388 210 aaKnown RBP10.66□□□□□ -0.7
PTPRM-203ENST00000400060 HERVK_113P62684 666 aa10.66□□□□□ -0.7
PTPRM-203ENST00000400060 EXOC3L4Q17RC7 722 aa10.66□□□□□ -0.7
PTPRM-203ENST00000400060 OTUD6AQ7L8S5 288 aa10.66□□□□□ -0.7
PTPRM-203ENST00000400060 ANKRD23Q86SG2 305 aa10.66□□□□□ -0.7
PTPRM-203ENST00000400060 SPATA5Q8NB90 893 aa10.66□□□□□ -0.7
PTPRM-203ENST00000400060 ERGIC2Q96RQ1 377 aa10.66□□□□□ -0.7
PTPRM-203ENST00000400060 A0A0G2JND7 137 aa10.66□□□□□ -0.7
PTPRM-203ENST00000400060 DPPA5A6NC42 116 aa10.66□□□□□ -0.7
PTPRM-203ENST00000400060 SERPINI2O75830 405 aa10.66□□□□□ -0.7
PTPRM-203ENST00000400060 UNC5CO95185 931 aa10.66□□□□□ -0.7
PTPRM-203ENST00000400060 HELBQ8NG08 1087 aaPredicted RBP10.66□□□□□ -0.7
PTPRM-203ENST00000400060 RBM46Q8TBY0 533 aaKnown RBP10.66□□□□□ -0.7
PTPRM-203ENST00000400060 STAMQ92783 540 aa10.66□□□□□ -0.7
PTPRM-203ENST00000400060 KCNK16Q96T55 309 aa10.66□□□□□ -0.7
PTPRM-203ENST00000400060 TMOD4Q9NZQ9 345 aa10.66□□□□□ -0.7
PTPRM-203ENST00000400060 RABGEF1Q9UJ41 708 aa10.66□□□□□ -0.7
PTPRM-203ENST00000400060 FAM237AA0A1B0GTK4 181 aa10.66□□□□□ -0.7
PTPRM-203ENST00000400060 DNAJC6O75061 913 aa10.66□□□□□ -0.7
PTPRM-203ENST00000400060 PPIDQ08752 370 aaKnown RBP10.66□□□□□ -0.7
PTPRM-203ENST00000400060 ORC2Q13416 577 aaPredicted RBP10.66□□□□□ -0.7
PTPRM-203ENST00000400060 SH3GL1Q99961 368 aa10.66□□□□□ -0.7
PTPRM-203ENST00000400060 DDX47Q9H0S4 455 aaKnown RBP10.66□□□□□ -0.7
PTPRM-203ENST00000400060 OLFML3Q9NRN5 406 aa10.66□□□□□ -0.7
PTPRM-203ENST00000400060 MROH7-TTC4A0A0A0MT08 1334 aa10.66□□□□□ -0.7
PTPRM-203ENST00000400060 CAMSAP1Q5T5Y3 1602 aa10.65□□□□□ -0.7
PTPRM-203ENST00000400060 ZNF839A8K0R7 811 aa10.65□□□□□ -0.7
PTPRM-203ENST00000400060 F8VZ95 297 aa10.65□□□□□ -0.7
PTPRM-203ENST00000400060 FAM13AO94988 1023 aa10.65□□□□□ -0.7
PTPRM-203ENST00000400060 AFPP02771 609 aaKnown RBP10.65□□□□□ -0.7
PTPRM-203ENST00000400060 INHBAP08476 426 aa10.65□□□□□ -0.7
PTPRM-203ENST00000400060 PLS3P13797 630 aa10.65□□□□□ -0.7
PTPRM-203ENST00000400060 BASP1P80723 227 aaKnown RBP10.65□□□□□ -0.7
PTPRM-203ENST00000400060 SYCP2LQ5T4T6 812 aa10.65□□□□□ -0.7
PTPRM-203ENST00000400060 ALKBH5Q6P6C2 394 aaKnown RBP10.65□□□□□ -0.7
PTPRM-203ENST00000400060 PCGF5Q86SE9 256 aa10.65□□□□□ -0.7
PTPRM-203ENST00000400060 SLF2Q8IX21 1173 aa10.65□□□□□ -0.7
PTPRM-203ENST00000400060 BLIDQ8IZY5 108 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms