RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 CYP26A1O43174 497 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 TMEM253P0C7T8 217 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 GSTA5Q7RTV2 222 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 SAAL1Q96ER3 474 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 NACC1Q96RE7 527 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 HEMGNQ9BXL5 484 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 THAP2Q9H0W7 228 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 ZBTB12Q9Y330 459 aaPredicted RBP5.33□□□□□ -1.56
SMAD4-202ENST00000398417 MYO1FO00160 1098 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 DDX3XO00571 662 aaKnown RBP eCLIP5.33□□□□□ -1.562e-13■□□□□ 10.8
SMAD4-202ENST00000398417 DR1Q01658 176 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 APOBEC3HQ6NTF7 200 aaKnown RBP5.33□□□□□ -1.56
SMAD4-202ENST00000398417 CERKQ8TCT0 537 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 OSGEPQ9NPF4 335 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 ZNF70Q9UC06 446 aaPredicted RBP5.33□□□□□ -1.56
SMAD4-202ENST00000398417 LRRC37A3O60309 1634 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 DLATP10515 647 aaKnown RBP5.33□□□□□ -1.56
SMAD4-202ENST00000398417 PMS2P54278 862 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 PTGISQ16647 500 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.33□□□□□ -1.56
SMAD4-202ENST00000398417 BTBD6Q96KE9 485 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 SCLT1Q96NL6 688 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 PURBQ96QR8 312 aaKnown RBP5.33□□□□□ -1.56
SMAD4-202ENST00000398417 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.33□□□□□ -1.561e-10■□□□□ 10.9
SMAD4-202ENST00000398417 AFG3L2Q9Y4W6 797 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 CITO14578 2027 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 SLC16A3O15427 465 aaKnown RBP5.33□□□□□ -1.56
SMAD4-202ENST00000398417 BUB1BO60566 1050 aaPredicted RBP5.33□□□□□ -1.56
SMAD4-202ENST00000398417 KRT14P02533 472 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 SEPT7Q16181 437 aaKnown RBP5.33□□□□□ -1.56
SMAD4-202ENST00000398417 MCTP2Q6DN12 878 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 OGFOD1Q8N543 542 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 RNF10Q8N5U6 811 aaKnown RBP5.33□□□□□ -1.56
SMAD4-202ENST00000398417 GIMAP7Q8NHV1 300 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 SLC35C1Q96A29 364 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 MPHOSPH6Q99547 160 aaKnown RBP5.33□□□□□ -1.56
SMAD4-202ENST00000398417 FAM118BQ9BPY3 351 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 EXOC7Q9UPT5 735 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 ATF5Q9Y2D1 282 aaPredicted RBP5.33□□□□□ -1.56
SMAD4-202ENST00000398417 RPA1P27694 616 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 MDH1P40925 334 aaKnown RBP5.33□□□□□ -1.56
SMAD4-202ENST00000398417 NPEPPSP55786 919 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 SEMA3FQ13275 785 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 LRRC14Q15048 493 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 PODNQ7Z5L7 613 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 SUPT20HQ8NEM7 779 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 ZMAT2Q96NC0 199 aaKnown RBP5.33□□□□□ -1.56
SMAD4-202ENST00000398417 PARVGQ9HBI0 331 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 TMBIM4Q9HC24 238 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 TOPORSQ9NS56 1045 aaPredicted RBP5.33□□□□□ -1.56
SMAD4-202ENST00000398417 STK32BQ9NY57 414 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 GGT7Q9UJ14 662 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 TBX3O15119 743 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 SART1O43290 800 aaKnown RBP5.33□□□□□ -1.56
SMAD4-202ENST00000398417 FTLP02792 175 aaPredicted RBP5.33□□□□□ -1.56
SMAD4-202ENST00000398417 PRLRP16471 622 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 MAGEA9P43362 315 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 GRIPAP1Q4V328 841 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 SEPT14Q6ZU15 432 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 WDR11Q9BZH6 1224 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 IRAK4Q9NWZ3 460 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 TAS2R14Q9NYV8 317 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 BZW2Q9Y6E2 419 aaKnown RBP5.33□□□□□ -1.56
SMAD4-202ENST00000398417 PPP1R12AO14974 1030 aaPredicted RBP5.33□□□□□ -1.56
SMAD4-202ENST00000398417 EIF3HO15372 352 aaKnown RBP eCLIP5.33□□□□□ -1.56
SMAD4-202ENST00000398417 P4HBP07237 508 aaKnown RBP5.33□□□□□ -1.56
SMAD4-202ENST00000398417 POTEJP0CG39 1038 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 SOX10P56693 466 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 CEP57Q86XR8 500 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 SLC20A1Q8WUM9 679 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 C1orf54Q8WWF1 131 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 FNBP1Q96RU3 617 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 ISCUQ9H1K1 167 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 DNAJC18Q9H819 358 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 TRAF3IP3Q9Y228 551 aa5.33□□□□□ -1.56
SMAD4-202ENST00000398417 A0A1W2PRG0 241 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 PJA2O43164 708 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 BCRP11274 1271 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 B4GALNT4Q76KP1 1039 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 UBL4BQ8N7F7 174 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 MDM1Q8TC05 714 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 TAOK3Q9H2K8 898 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 TAF1DQ9H5J8 278 aaPredicted RBP5.32□□□□□ -1.56
SMAD4-202ENST00000398417 FBXO28Q9NVF7 368 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 PNMA2Q9UL42 364 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 EMSYQ7Z589 1322 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 PHF20L1A8MW92 1017 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 ANKRD63C9JTQ0 380 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 TMOD1P28289 359 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 MTERF2Q49AM1 385 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 FAM133BQ5BKY9 247 aaKnown RBP5.32□□□□□ -1.56
SMAD4-202ENST00000398417 HGSNATQ68CP4 663 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 SH3BP5LQ7L8J4 393 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 DPH6Q7L8W6 267 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 FAM163AQ96GL9 167 aaPredicted RBP5.32□□□□□ -1.56
SMAD4-202ENST00000398417 NT5C1BQ96P26 610 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 NEUROG2Q9H2A3 272 aa5.32□□□□□ -1.56
SMAD4-202ENST00000398417 ZNF277Q9NRM2 450 aaPredicted RBP5.32□□□□□ -1.56
SMAD4-202ENST00000398417 LARSQ9P2J5 1176 aaKnown RBP5.32□□□□□ -1.56
SMAD4-202ENST00000398417 AARSP49588 968 aaKnown RBP eCLIP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms