RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 VPS11Q9H270 941 aa5.82□□□□□ -1.48
GABPB1-204ENST00000396464 SPTLC3Q9NUV7 552 aa5.82□□□□□ -1.48
GABPB1-204ENST00000396464 SIRT5Q9NXA8 310 aa5.82□□□□□ -1.48
GABPB1-204ENST00000396464 GPRC5BQ9NZH0 403 aa5.82□□□□□ -1.48
GABPB1-204ENST00000396464 SAMD15Q9P1V8 674 aa5.82□□□□□ -1.48
GABPB1-204ENST00000396464 INVSQ9Y283 1065 aa5.82□□□□□ -1.48
GABPB1-204ENST00000396464 SHISA3A0PJX4 238 aa5.82□□□□□ -1.48
GABPB1-204ENST00000396464 TTC36A6NLP5 189 aa5.82□□□□□ -1.48
GABPB1-204ENST00000396464 CBX4O00257 560 aa5.82□□□□□ -1.48
GABPB1-204ENST00000396464 GOLIM4O00461 696 aa5.82□□□□□ -1.48
GABPB1-204ENST00000396464 TOR1BO14657 336 aa5.82□□□□□ -1.48
GABPB1-204ENST00000396464 GLRX3O76003 335 aaKnown RBP5.82□□□□□ -1.48
GABPB1-204ENST00000396464 INMTO95050 263 aa5.82□□□□□ -1.48
GABPB1-204ENST00000396464 POLR2BP30876 1174 aaKnown RBP5.82□□□□□ -1.48
GABPB1-204ENST00000396464 PPM1AP35813 382 aa5.82□□□□□ -1.48
GABPB1-204ENST00000396464 UBA7P41226 1012 aa5.82□□□□□ -1.48
GABPB1-204ENST00000396464 GALK1P51570 392 aa5.82□□□□□ -1.48
GABPB1-204ENST00000396464 PCBP3P57721 371 aaKnown RBP5.82□□□□□ -1.48
GABPB1-204ENST00000396464 PFKPQ01813 784 aa5.82□□□□□ -1.48
GABPB1-204ENST00000396464 ROR1Q01973 937 aa5.82□□□□□ -1.48
GABPB1-204ENST00000396464 WASHC5Q12768 1159 aa5.82□□□□□ -1.48
GABPB1-204ENST00000396464 IFIT5Q13325 482 aaKnown RBP5.82□□□□□ -1.48
GABPB1-204ENST00000396464 SPATA1Q5VX52 437 aa5.82□□□□□ -1.48
GABPB1-204ENST00000396464 KIAA1614Q5VZ46 1190 aa5.82□□□□□ -1.48
GABPB1-204ENST00000396464 ABHD17CQ6PCB6 329 aa5.82□□□□□ -1.48
GABPB1-204ENST00000396464 FASTKD5Q7L8L6 764 aaKnown RBP5.82□□□□□ -1.48
GABPB1-204ENST00000396464 PTRH1Q86Y79 214 aaKnown RBP5.82□□□□□ -1.48
GABPB1-204ENST00000396464 ANKRD18AQ8IVF6 992 aa5.82□□□□□ -1.48
GABPB1-204ENST00000396464 HSCBQ8IWL3 235 aa5.82□□□□□ -1.48
GABPB1-204ENST00000396464 DIO2Q92813 273 aa5.82□□□□□ -1.48
GABPB1-204ENST00000396464 ZNF496Q96IT1 587 aaPredicted RBP5.82□□□□□ -1.48
GABPB1-204ENST00000396464 TEKT5Q96M29 485 aa5.82□□□□□ -1.48
GABPB1-204ENST00000396464 SEC62Q99442 399 aaKnown RBP5.82□□□□□ -1.48
GABPB1-204ENST00000396464 SLC26A6Q9BXS9 759 aa5.82□□□□□ -1.48
GABPB1-204ENST00000396464 UNC45AQ9H3U1 944 aa5.82□□□□□ -1.48
GABPB1-204ENST00000396464 RTEL1Q9NZ71 1219 aa5.82□□□□□ -1.48
GABPB1-204ENST00000396464 ARHGAP28Q9P2N2 729 aa5.82□□□□□ -1.48
GABPB1-204ENST00000396464 MAGED1Q9Y5V3 778 aaPredicted RBP5.82□□□□□ -1.48
GABPB1-204ENST00000396464 DLX3O60479 287 aa5.81□□□□□ -1.48
GABPB1-204ENST00000396464 GAS7O60861 476 aa5.81□□□□□ -1.48
GABPB1-204ENST00000396464 TBC1D8O95759 1140 aa5.81□□□□□ -1.48
GABPB1-204ENST00000396464 ABCB4P21439 1286 aa5.81□□□□□ -1.48
GABPB1-204ENST00000396464 AKAP5P24588 427 aa5.81□□□□□ -1.48
GABPB1-204ENST00000396464 KRT20P35900 424 aa5.81□□□□□ -1.48
GABPB1-204ENST00000396464 SRSF3P84103 164 aaKnown RBP5.81□□□□□ -1.48
GABPB1-204ENST00000396464 NTRK3Q16288 839 aa5.81□□□□□ -1.48
GABPB1-204ENST00000396464 KIAA0753Q2KHM9 967 aa5.81□□□□□ -1.48
GABPB1-204ENST00000396464 PRR16Q569H4 304 aa5.81□□□□□ -1.48
GABPB1-204ENST00000396464 TDRD10Q5VZ19 366 aaKnown RBP5.81□□□□□ -1.48
GABPB1-204ENST00000396464 OLFML2BQ68BL8 750 aa5.81□□□□□ -1.48
GABPB1-204ENST00000396464 LMBRD2Q68DH5 695 aaPredicted RBP5.81□□□□□ -1.48
GABPB1-204ENST00000396464 CEP128Q6ZU80 1094 aa5.81□□□□□ -1.48
GABPB1-204ENST00000396464 MSL3Q8N5Y2 521 aaKnown RBP5.81□□□□□ -1.48
GABPB1-204ENST00000396464 LSMEM1Q8N8F7 131 aa5.81□□□□□ -1.48
GABPB1-204ENST00000396464 DIS3LQ8TF46 1054 aaKnown RBP5.81□□□□□ -1.48
GABPB1-204ENST00000396464 BTN2A2Q8WVV5 523 aa5.81□□□□□ -1.48
GABPB1-204ENST00000396464 HDAC2Q92769 488 aaKnown RBP5.81□□□□□ -1.48
GABPB1-204ENST00000396464 KIAA1191Q96A73 305 aa5.81□□□□□ -1.48
GABPB1-204ENST00000396464 DDX11Q96FC9 970 aa5.81□□□□□ -1.48
GABPB1-204ENST00000396464 BARD1Q99728 777 aaKnown RBP5.81□□□□□ -1.48
GABPB1-204ENST00000396464 HAUS7Q99871 368 aa5.81□□□□□ -1.48
GABPB1-204ENST00000396464 PDGFDQ9GZP0 370 aaPredicted RBP5.81□□□□□ -1.48
GABPB1-204ENST00000396464 CD248Q9HCU0 757 aa5.81□□□□□ -1.48
GABPB1-204ENST00000396464 ANKEF1Q9NU02 776 aa5.81□□□□□ -1.48
GABPB1-204ENST00000396464 THG1LQ9NWX6 298 aaKnown RBP5.81□□□□□ -1.48
GABPB1-204ENST00000396464 IRAK3Q9Y616 596 aa5.81□□□□□ -1.48
GABPB1-204ENST00000396464 A0A087WV62 115 aa5.8□□□□□ -1.48
GABPB1-204ENST00000396464 H2AFYO75367 372 aaKnown RBP5.8□□□□□ -1.48
GABPB1-204ENST00000396464 USP2O75604 605 aaPredicted RBP5.8□□□□□ -1.48
GABPB1-204ENST00000396464 CRTAMO95727 393 aa5.8□□□□□ -1.48
GABPB1-204ENST00000396464 RPS6KB1P23443 525 aa5.8□□□□□ -1.48
GABPB1-204ENST00000396464 HOXC13P31276 330 aa5.8□□□□□ -1.48
GABPB1-204ENST00000396464 PRIM2P49643 509 aa5.8□□□□□ -1.48
GABPB1-204ENST00000396464 LRRC32Q14392 662 aa5.8□□□□□ -1.48
GABPB1-204ENST00000396464 KIF22Q14807 665 aa5.8□□□□□ -1.48
GABPB1-204ENST00000396464 BBS9Q3SYG4 887 aa5.8□□□□□ -1.48
GABPB1-204ENST00000396464 CCDC38Q502W7 563 aa5.8□□□□□ -1.48
GABPB1-204ENST00000396464 DGKKQ5KSL6 1271 aa5.8□□□□□ -1.48
GABPB1-204ENST00000396464 SWSAP1Q6NVH7 229 aa5.8□□□□□ -1.48
GABPB1-204ENST00000396464 MAMDC2Q7Z304 686 aaPredicted RBP5.8□□□□□ -1.48
GABPB1-204ENST00000396464 ZNF513Q8N8E2 541 aaPredicted RBP5.8□□□□□ -1.48
GABPB1-204ENST00000396464 PPP1R35Q8TAP8 253 aa5.8□□□□□ -1.48
GABPB1-204ENST00000396464 SYTL5Q8TDW5 730 aaPredicted RBP5.8□□□□□ -1.48
GABPB1-204ENST00000396464 CHTF18Q8WVB6 975 aa5.8□□□□□ -1.48
GABPB1-204ENST00000396464 LINC01599Q8WXQ3 324 aa5.8□□□□□ -1.48
GABPB1-204ENST00000396464 HVCN1Q96D96 273 aa5.8□□□□□ -1.48
GABPB1-204ENST00000396464 NUDT16L1Q9BRJ7 211 aaKnown RBP5.8□□□□□ -1.48
GABPB1-204ENST00000396464 KRTAP4-11Q9BYQ6 195 aa5.8□□□□□ -1.48
GABPB1-204ENST00000396464 BHMT2Q9H2M3 363 aa5.8□□□□□ -1.48
GABPB1-204ENST00000396464 ATP6V0A4Q9HBG4 840 aa5.8□□□□□ -1.48
GABPB1-204ENST00000396464 TOPORSQ9NS56 1045 aaPredicted RBP5.8□□□□□ -1.48
GABPB1-204ENST00000396464 TRAF6Q9Y4K3 522 aa5.8□□□□□ -1.48
GABPB1-204ENST00000396464 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.79□□□□□ -1.48
GABPB1-204ENST00000396464 KLHL33A6NCF5 533 aa5.79□□□□□ -1.48
GABPB1-204ENST00000396464 SYNDIG1LA6NDD5 238 aa5.79□□□□□ -1.48
GABPB1-204ENST00000396464 FAM227AF5H4B4 570 aa5.79□□□□□ -1.48
GABPB1-204ENST00000396464 AREL1O15033 823 aa5.79□□□□□ -1.48
GABPB1-204ENST00000396464 PLOD3O60568 738 aa5.79□□□□□ -1.48
GABPB1-204ENST00000396464 FKTNO75072 461 aa5.79□□□□□ -1.48
GABPB1-204ENST00000396464 SASH1O94885 1247 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms