RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 CRIPAKQ8N1N5 446 aa15.4■□□□□ 0.06
CXCL12-205ENST00000395794 FAM184AQ8NB25 1140 aa15.4■□□□□ 0.06
CXCL12-205ENST00000395794 TNFRSF25Q93038 417 aa15.4■□□□□ 0.06
CXCL12-205ENST00000395794 C8orf76Q96K31 380 aa15.4■□□□□ 0.06
CXCL12-205ENST00000395794 CEP170P1Q96L14 293 aa15.4■□□□□ 0.06
CXCL12-205ENST00000395794 SH2D3AQ9BRG2 576 aa15.4■□□□□ 0.06
CXCL12-205ENST00000395794 INO80BQ9C086 356 aaPredicted RBP15.4■□□□□ 0.06
CXCL12-205ENST00000395794 AAASQ9NRG9 546 aa15.4■□□□□ 0.06
CXCL12-205ENST00000395794 SUCLA2Q9P2R7 463 aaPredicted RBP15.4■□□□□ 0.06
CXCL12-205ENST00000395794 PCDHA12Q9UN75 941 aa15.4■□□□□ 0.06
CXCL12-205ENST00000395794 PPME1Q9Y570 386 aa15.4■□□□□ 0.06
CXCL12-205ENST00000395794 MRPL42Q9Y6G3 142 aaKnown RBP15.4■□□□□ 0.06
CXCL12-205ENST00000395794 COL4A4P53420 1690 aaPredicted RBP15.39■□□□□ 0.05
CXCL12-205ENST00000395794 MYH9P35579 1960 aaKnown RBP15.39■□□□□ 0.05
CXCL12-205ENST00000395794 FAM205CA6NFA0 338 aa15.39■□□□□ 0.05
CXCL12-205ENST00000395794 C9IYK1 514 aa15.39■□□□□ 0.05
CXCL12-205ENST00000395794 HOXA2O43364 376 aa15.39■□□□□ 0.05
CXCL12-205ENST00000395794 NEMFO60524 1076 aa15.39■□□□□ 0.05
CXCL12-205ENST00000395794 MAFO75444 373 aaPredicted RBP15.39■□□□□ 0.05
CXCL12-205ENST00000395794 STBD1O95210 358 aa15.39■□□□□ 0.05
CXCL12-205ENST00000395794 POLGP54098 1239 aaPredicted RBP15.39■□□□□ 0.05
CXCL12-205ENST00000395794 C8orf34Q49A92 452 aa15.39■□□□□ 0.05
CXCL12-205ENST00000395794 NAALADL2Q58DX5 795 aa15.39■□□□□ 0.05
CXCL12-205ENST00000395794 PLA2G4FQ68DD2 849 aa15.39■□□□□ 0.05
CXCL12-205ENST00000395794 RHPN2Q8IUC4 686 aa15.39■□□□□ 0.05
CXCL12-205ENST00000395794 ABI1Q8IZP0 508 aa15.39■□□□□ 0.05
CXCL12-205ENST00000395794 ZNF668Q96K58 619 aaPredicted RBP15.39■□□□□ 0.05
CXCL12-205ENST00000395794 UHRF1Q96T88 793 aaPredicted RBP15.39■□□□□ 0.05
CXCL12-205ENST00000395794 LXNQ9BS40 222 aa15.39■□□□□ 0.05
CXCL12-205ENST00000395794 NSUN3Q9H649 340 aaKnown RBP15.39■□□□□ 0.05
CXCL12-205ENST00000395794 ELAC1Q9H777 363 aaKnown RBP15.39■□□□□ 0.05
CXCL12-205ENST00000395794 ZSWIM4Q9H7M6 989 aa15.39■□□□□ 0.05
CXCL12-205ENST00000395794 CYP26B1Q9NR63 512 aa15.39■□□□□ 0.05
CXCL12-205ENST00000395794 TMEM161AQ9NX61 479 aa15.39■□□□□ 0.05
CXCL12-205ENST00000395794 DACT1Q9NYF0 836 aa15.39■□□□□ 0.05
CXCL12-205ENST00000395794 PCDHB12Q9Y5F1 795 aa15.39■□□□□ 0.05
CXCL12-205ENST00000395794 TBKBP1A7MCY6 615 aa15.38■□□□□ 0.05
CXCL12-205ENST00000395794 TNFRSF10AO00220 468 aa15.38■□□□□ 0.05
CXCL12-205ENST00000395794 NCK2O43639 380 aa15.38■□□□□ 0.05
CXCL12-205ENST00000395794 BMP1P13497 986 aa15.38■□□□□ 0.05
CXCL12-205ENST00000395794 ATP2B1P20020 1258 aa15.38■□□□□ 0.05
CXCL12-205ENST00000395794 SFPQP23246 707 aaKnown RBP eCLIP15.38■□□□□ 0.05
CXCL12-205ENST00000395794 YWHABP31946 246 aaKnown RBP15.38■□□□□ 0.05
CXCL12-205ENST00000395794 RFC5P40937 340 aa15.38■□□□□ 0.05
CXCL12-205ENST00000395794 FAM189BP81408 668 aa15.38■□□□□ 0.05
CXCL12-205ENST00000395794 GUCY1B3Q02153 619 aa15.38■□□□□ 0.05
CXCL12-205ENST00000395794 ZNF410Q86VK4 478 aa15.38■□□□□ 0.05
CXCL12-205ENST00000395794 TPH2Q8IWU9 490 aa15.38■□□□□ 0.05
CXCL12-205ENST00000395794 C4orf19Q8IY42 314 aa15.38■□□□□ 0.05
CXCL12-205ENST00000395794 P2RX5Q93086 422 aa15.38■□□□□ 0.05
CXCL12-205ENST00000395794 PPP2R3CQ969Q6 453 aa15.38■□□□□ 0.05
CXCL12-205ENST00000395794 CCDC43Q96MW1 224 aaKnown RBP15.38■□□□□ 0.05
CXCL12-205ENST00000395794 UBE2ZQ9H832 354 aaPredicted RBP15.38■□□□□ 0.05
CXCL12-205ENST00000395794 TTC12Q9H892 705 aaPredicted RBP15.38■□□□□ 0.05
CXCL12-205ENST00000395794 IGKV6-21A0A0C4DH24 114 aa15.37■□□□□ 0.05
CXCL12-205ENST00000395794 GRM6O15303 877 aa15.37■□□□□ 0.05
CXCL12-205ENST00000395794 ST18O60284 1047 aa15.37■□□□□ 0.05
CXCL12-205ENST00000395794 TXKP42681 527 aa15.37■□□□□ 0.05
CXCL12-205ENST00000395794 RBM25P49756 843 aaKnown RBP15.37■□□□□ 0.05
CXCL12-205ENST00000395794 GATMP50440 423 aa15.37■□□□□ 0.05
CXCL12-205ENST00000395794 KCNQ1P51787 676 aa15.37■□□□□ 0.05
CXCL12-205ENST00000395794 NPEPPSP55786 919 aa15.37■□□□□ 0.05
CXCL12-205ENST00000395794 CYP4A11Q02928 519 aa15.37■□□□□ 0.05
CXCL12-205ENST00000395794 DRP2Q13474 957 aa15.37■□□□□ 0.05
CXCL12-205ENST00000395794 DSC3Q14574 896 aa15.37■□□□□ 0.05
CXCL12-205ENST00000395794 RABEP1Q15276 862 aa15.37■□□□□ 0.05
CXCL12-205ENST00000395794 CSPP1Q1MSJ5 1256 aa15.37■□□□□ 0.05
CXCL12-205ENST00000395794 XKR9Q5GH70 373 aa15.37■□□□□ 0.05
CXCL12-205ENST00000395794 TCEAL5Q5H9L2 206 aa15.37■□□□□ 0.05
CXCL12-205ENST00000395794 EP400NLQ6ZTU2 488 aa15.37■□□□□ 0.05
CXCL12-205ENST00000395794 RNF169Q8NCN4 708 aa15.37■□□□□ 0.05
CXCL12-205ENST00000395794 NEK9Q8TD19 979 aa15.37■□□□□ 0.05
CXCL12-205ENST00000395794 TCP11Q8WWU5 503 aa15.37■□□□□ 0.05
CXCL12-205ENST00000395794 DYDC2Q96IM9 177 aa15.37■□□□□ 0.05
CXCL12-205ENST00000395794 NLRP4Q96MN2 994 aa15.37■□□□□ 0.05
CXCL12-205ENST00000395794 ALG13Q9NP73 1137 aaKnown RBP15.37■□□□□ 0.05
CXCL12-205ENST00000395794 CHST12Q9NRB3 414 aa15.37■□□□□ 0.05
CXCL12-205ENST00000395794 RGL1Q9NZL6 768 aa15.37■□□□□ 0.05
CXCL12-205ENST00000395794 PLAGL2Q9UPG8 496 aa15.37■□□□□ 0.05
CXCL12-205ENST00000395794 PRRC2BQ5JSZ5 2229 aaKnown RBP15.37■□□□□ 0.05
CXCL12-205ENST00000395794 TTC3P53804 2025 aa15.36■□□□□ 0.05
CXCL12-205ENST00000395794 A0A087WZ62 844 aa15.36■□□□□ 0.05
CXCL12-205ENST00000395794 GAS2O43903 313 aaKnown RBP15.36■□□□□ 0.05
CXCL12-205ENST00000395794 LINC00271P0C7V0 271 aa15.36■□□□□ 0.05
CXCL12-205ENST00000395794 KCNA5P22460 613 aa15.36■□□□□ 0.05
CXCL12-205ENST00000395794 MCM7P33993 719 aa15.36■□□□□ 0.05
CXCL12-205ENST00000395794 ST3GAL1Q11201 340 aa15.36■□□□□ 0.05
CXCL12-205ENST00000395794 CTTNQ14247 550 aaKnown RBP15.36■□□□□ 0.05
CXCL12-205ENST00000395794 FAM102BQ5T8I3 360 aa15.36■□□□□ 0.05
CXCL12-205ENST00000395794 KLHL23Q8NBE8 558 aa15.36■□□□□ 0.05
CXCL12-205ENST00000395794 PSPC1Q8WXF1 523 aaKnown RBP15.36■□□□□ 0.05
CXCL12-205ENST00000395794 CEP89Q96ST8 783 aa15.36■□□□□ 0.05
CXCL12-205ENST00000395794 EIF2AK1Q9BQI3 630 aaKnown RBP15.36■□□□□ 0.05
CXCL12-205ENST00000395794 FDXACB1Q9BRP7 624 aaPredicted RBP15.36■□□□□ 0.05
CXCL12-205ENST00000395794 TMEM117Q9H0C3 514 aa15.36■□□□□ 0.05
CXCL12-205ENST00000395794 FOXP1Q9H334 677 aaPredicted RBP15.36■□□□□ 0.05
CXCL12-205ENST00000395794 KIF3AQ9Y496 699 aa15.36■□□□□ 0.05
CXCL12-205ENST00000395794 COL4A3BPQ9Y5P4 624 aa15.36■□□□□ 0.05
CXCL12-205ENST00000395794 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.35■□□□□ 0.05
CXCL12-205ENST00000395794 CSDE1O75534 798 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms