RNA–Protein interactions for RNA: ENST00000395715.7

TRPS1-203, Transcript of transcriptional repressor GATA binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPS1, Length 9,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-203ENST00000395715 FBXW10Q5XX13 1052 aa8.5□□□□□ -1.05
TRPS1-203ENST00000395715 NLRP14Q86W24 1093 aa8.5□□□□□ -1.05
TRPS1-203ENST00000395715 SLC8A2Q9UPR5 921 aa8.5□□□□□ -1.05
TRPS1-203ENST00000395715 KPNA4O00629 521 aaPredicted RBP8.5□□□□□ -1.05
TRPS1-203ENST00000395715 PRPF4O43172 522 aaKnown RBP eCLIP8.5□□□□□ -1.05
TRPS1-203ENST00000395715 MAP3K13O43283 966 aa8.5□□□□□ -1.05
TRPS1-203ENST00000395715 CCND1P24385 295 aa8.5□□□□□ -1.05
TRPS1-203ENST00000395715 GGCXP38435 758 aa8.5□□□□□ -1.05
TRPS1-203ENST00000395715 NUP93Q8N1F7 819 aa8.5□□□□□ -1.05
TRPS1-203ENST00000395715 SUPT20HQ8NEM7 779 aa8.5□□□□□ -1.05
TRPS1-203ENST00000395715 FRMD6Q96NE9 622 aa8.5□□□□□ -1.05
TRPS1-203ENST00000395715 SENP1Q9P0U3 644 aa8.5□□□□□ -1.05
TRPS1-203ENST00000395715 SMCO3A2RU48 225 aa8.5□□□□□ -1.05
TRPS1-203ENST00000395715 MSR1P21757 451 aa8.5□□□□□ -1.05
TRPS1-203ENST00000395715 PLOD1Q02809 727 aaPredicted RBP8.5□□□□□ -1.05
TRPS1-203ENST00000395715 ZNF507Q8TCN5 953 aa8.5□□□□□ -1.05
TRPS1-203ENST00000395715 CALML6Q8TD86 181 aa8.5□□□□□ -1.05
TRPS1-203ENST00000395715 ARL8AQ96BM9 186 aa8.5□□□□□ -1.05
TRPS1-203ENST00000395715 FAM210AQ96ND0 272 aa8.5□□□□□ -1.05
TRPS1-203ENST00000395715 PANX2Q96RD6 677 aa8.5□□□□□ -1.05
TRPS1-203ENST00000395715 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.5□□□□□ -1.05
TRPS1-203ENST00000395715 HECW1Q76N89 1606 aa8.5□□□□□ -1.05
TRPS1-203ENST00000395715 CSE1LP55060 971 aaKnown RBP8.5□□□□□ -1.05
TRPS1-203ENST00000395715 NRG3P56975 720 aa8.5□□□□□ -1.05
TRPS1-203ENST00000395715 ARHGEF10LQ9HCE6 1279 aa8.5□□□□□ -1.05
TRPS1-203ENST00000395715 ENO1P06733 434 aaKnown RBP8.49□□□□□ -1.05
TRPS1-203ENST00000395715 MFAP3P55082 362 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 TNFAIP2Q03169 654 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 GPBP1Q86WP2 473 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 FAF2Q96CS3 445 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 TMEM87BQ96K49 555 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 MRPL47Q9HD33 250 aaKnown RBP8.49□□□□□ -1.05
TRPS1-203ENST00000395715 IL1RAPL1Q9NZN1 696 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 PDP2Q9P2J9 529 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 PI4KAP2A4QPH2 592 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 ZNF233A6NK53 670 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 E5RI56 91 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 STK25O00506 426 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 MYL7Q01449 175 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 TRIM32Q13049 653 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 DDB1Q16531 1140 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 ZCWPW2Q504Y3 356 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 FASTKD1Q53R41 847 aaKnown RBP8.49□□□□□ -1.05
TRPS1-203ENST00000395715 TRIQKQ629K1 86 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 PI4KAP1Q8N8J0 262 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 APPL2Q8NEU8 664 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 EYA3Q99504 573 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.49□□□□□ -1.05
TRPS1-203ENST00000395715 C5orf58C9J3I9 102 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 K7ENM7 598 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 LSM1O15116 133 aaKnown RBP8.49□□□□□ -1.05
TRPS1-203ENST00000395715 SNRPA1P09661 255 aaKnown RBP8.49□□□□□ -1.05
TRPS1-203ENST00000395715 DSG1Q02413 1049 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 KDSRQ06136 332 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 THOC7Q6I9Y2 204 aaKnown RBP8.49□□□□□ -1.05
TRPS1-203ENST00000395715 POTEAQ6S8J7 498 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 RSRC2Q7L4I2 434 aaKnown RBP8.49□□□□□ -1.05
TRPS1-203ENST00000395715 ANKRD13CQ8N6S4 541 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 B3GALT6Q96L58 329 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 NOL6Q9H6R4 1146 aaKnown RBP8.49□□□□□ -1.05
TRPS1-203ENST00000395715 CEBPAP49715 358 aaPredicted RBP8.49□□□□□ -1.05
TRPS1-203ENST00000395715 DNAJC3Q13217 504 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 NAIF1Q69YI7 327 aaPredicted RBP8.49□□□□□ -1.05
TRPS1-203ENST00000395715 KRT25Q7Z3Z0 450 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 ARHGAP22Q7Z5H3 698 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 TMA16Q96EY4 203 aaKnown RBP8.49□□□□□ -1.05
TRPS1-203ENST00000395715 VPS50Q96JG6 964 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 KRT84Q9NSB2 600 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 STK32BQ9NY57 414 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 SLC16A1P53985 500 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 TRAP1Q12931 704 aaKnown RBP8.49□□□□□ -1.05
TRPS1-203ENST00000395715 ZSWIM7Q19AV6 140 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 BBS9Q3SYG4 887 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 C8orf34Q49A92 452 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 LARP4BQ92615 738 aaKnown RBP8.49□□□□□ -1.05
TRPS1-203ENST00000395715 FSD1LQ9BXM9 530 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 MRPL1Q9BYD6 325 aaKnown RBP8.49□□□□□ -1.05
TRPS1-203ENST00000395715 SYNPO2Q9UMS6 1093 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 NFKBIAP25963 317 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 ATP1A4Q13733 1029 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 AOC3Q16853 763 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 EIF2S3LQ2VIR3 472 aaKnown RBP8.49□□□□□ -1.05
TRPS1-203ENST00000395715 WLSQ5T9L3 541 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 CEP44Q9C0F1 390 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 CACNA2D2Q9NY47 1150 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 ARF3P61204 181 aaPredicted RBP8.49□□□□□ -1.05
TRPS1-203ENST00000395715 ABCE1P61221 599 aaKnown RBP8.49□□□□□ -1.05
TRPS1-203ENST00000395715 ARF1P84077 181 aaKnown RBP8.49□□□□□ -1.05
TRPS1-203ENST00000395715 NCF4Q15080 339 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 LAYNQ6UX15 382 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 AP1M1Q9BXS5 423 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 NRDE2Q9H7Z3 1164 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 SNTNA6NMZ2 147 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 POTECB2RU33 542 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 LDHBP07195 334 aaKnown RBP8.49□□□□□ -1.05
TRPS1-203ENST00000395715 POU5F1BQ06416 359 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 STXBP2Q15833 593 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 NFIL3Q16649 462 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 SARM1Q6SZW1 724 aa8.49□□□□□ -1.05
TRPS1-203ENST00000395715 C16orf89Q6UX73 402 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms