RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 TEKT3Q9BXF9 490 aa21.1■□□□□ 0.97
SHANK1-203ENST00000391813 USP15Q9Y4E8 981 aaPredicted RBP21.1■□□□□ 0.97
SHANK1-203ENST00000391813 ENO4A6NNW6 628 aa21.1■□□□□ 0.97
SHANK1-203ENST00000391813 CASP1P29466 404 aa21.1■□□□□ 0.97
SHANK1-203ENST00000391813 ARHGEF16Q5VV41 709 aa21.1■□□□□ 0.97
SHANK1-203ENST00000391813 DEPTORQ8TB45 409 aa21.1■□□□□ 0.97
SHANK1-203ENST00000391813 CCDC138Q96M89 665 aa21.1■□□□□ 0.97
SHANK1-203ENST00000391813 FUCA2Q9BTY2 467 aa21.1■□□□□ 0.97
SHANK1-203ENST00000391813 SENP1Q9P0U3 644 aa21.1■□□□□ 0.97
SHANK1-203ENST00000391813 MST1RQ04912 1400 aa21.1■□□□□ 0.97
SHANK1-203ENST00000391813 GRAMD4Q6IC98 578 aa21.1■□□□□ 0.97
SHANK1-203ENST00000391813 JADE1Q6IE81 842 aa21.1■□□□□ 0.97
SHANK1-203ENST00000391813 XPO6Q96QU8 1125 aaKnown RBP21.1■□□□□ 0.97
SHANK1-203ENST00000391813 PCDHA1Q9Y5I3 950 aa21.1■□□□□ 0.97
SHANK1-203ENST00000391813 IQCA1LA6NCM1 817 aa21.09■□□□□ 0.97
SHANK1-203ENST00000391813 KRT19P08727 400 aa21.09■□□□□ 0.97
SHANK1-203ENST00000391813 PLA2G4BP0C869 781 aa21.09■□□□□ 0.97
SHANK1-203ENST00000391813 RBM43Q6ZSC3 357 aaKnown RBP21.09■□□□□ 0.97
SHANK1-203ENST00000391813 NOA1Q8NC60 698 aaKnown RBP21.09■□□□□ 0.97
SHANK1-203ENST00000391813 EIF2AQ9BY44 585 aaKnown RBP21.09■□□□□ 0.97
SHANK1-203ENST00000391813 SSU72P8A0A1W2PR75 194 aa21.09■□□□□ 0.97
SHANK1-203ENST00000391813 NBPF26B4DH59 902 aa21.09■□□□□ 0.97
SHANK1-203ENST00000391813 GGPS1O95749 300 aa21.09■□□□□ 0.97
SHANK1-203ENST00000391813 PTGISQ16647 500 aa21.09■□□□□ 0.97
SHANK1-203ENST00000391813 TRIM50Q86XT4 487 aa21.09■□□□□ 0.97
SHANK1-203ENST00000391813 GUF1Q8N442 669 aaKnown RBP21.09■□□□□ 0.97
SHANK1-203ENST00000391813 NBPF15Q8N660 670 aa21.09■□□□□ 0.97
SHANK1-203ENST00000391813 STRBPQ96SI9 672 aaKnown RBP21.09■□□□□ 0.97
SHANK1-203ENST00000391813 UPF3AQ9H1J1 476 aaKnown RBP21.09■□□□□ 0.97
SHANK1-203ENST00000391813 KIAA1210Q9ULL0 1709 aa21.09■□□□□ 0.97
SHANK1-203ENST00000391813 ART3Q13508 389 aa21.09■□□□□ 0.97
SHANK1-203ENST00000391813 FAM102BQ5T8I3 360 aa21.09■□□□□ 0.97
SHANK1-203ENST00000391813 UBE2TQ9NPD8 197 aaPredicted RBP21.09■□□□□ 0.97
SHANK1-203ENST00000391813 FOXP2O15409 715 aa21.09■□□□□ 0.97
SHANK1-203ENST00000391813 KRT1P04264 644 aa21.09■□□□□ 0.97
SHANK1-203ENST00000391813 CA8P35219 290 aa21.09■□□□□ 0.97
SHANK1-203ENST00000391813 MXI1P50539 228 aa21.09■□□□□ 0.97
SHANK1-203ENST00000391813 TRIP13Q15645 432 aaPredicted RBP21.09■□□□□ 0.97
SHANK1-203ENST00000391813 BBS9Q3SYG4 887 aa21.09■□□□□ 0.97
SHANK1-203ENST00000391813 SCYL2Q6P3W7 929 aa21.09■□□□□ 0.97
SHANK1-203ENST00000391813 BAG5Q9UL15 447 aa21.09■□□□□ 0.97
SHANK1-203ENST00000391813 RSBN1LQ6PCB5 846 aaPredicted RBP21.08■□□□□ 0.97
SHANK1-203ENST00000391813 CHP1Q99653 195 aa21.08■□□□□ 0.97
SHANK1-203ENST00000391813 FRMPD2Q68DX3 1309 aaPredicted RBP21.08■□□□□ 0.97
SHANK1-203ENST00000391813 CCT8L1PA6NM43 557 aa21.08■□□□□ 0.97
SHANK1-203ENST00000391813 TTI1O43156 1089 aa21.08■□□□□ 0.97
SHANK1-203ENST00000391813 TOM1L1O75674 476 aa21.08■□□□□ 0.97
SHANK1-203ENST00000391813 ASNSP08243 561 aa21.08■□□□□ 0.97
SHANK1-203ENST00000391813 FXR1P51114 621 aaKnown RBP eCLIP21.08■□□□□ 0.97
SHANK1-203ENST00000391813 TRPM8Q7Z2W7 1104 aa21.08■□□□□ 0.97
SHANK1-203ENST00000391813 ELOA2Q8IYF1 753 aaPredicted RBP21.08■□□□□ 0.97
SHANK1-203ENST00000391813 CELF1Q92879 486 aaKnown RBP21.08■□□□□ 0.97
SHANK1-203ENST00000391813 TMEM51Q9NW97 253 aa21.08■□□□□ 0.97
SHANK1-203ENST00000391813 CCPG1Q9ULG6 757 aa21.08■□□□□ 0.97
SHANK1-203ENST00000391813 ARFIP2P53365 341 aa21.08■□□□□ 0.96
SHANK1-203ENST00000391813 DMP1Q13316 513 aaPredicted RBP21.08■□□□□ 0.96
SHANK1-203ENST00000391813 ORC2Q13416 577 aaPredicted RBP21.08■□□□□ 0.96
SHANK1-203ENST00000391813 NBPF20Q3BBV1 942 aa21.08■□□□□ 0.96
SHANK1-203ENST00000391813 HACE1Q8IYU2 909 aa21.08■□□□□ 0.96
SHANK1-203ENST00000391813 ACCSQ96QU6 501 aa21.08■□□□□ 0.96
SHANK1-203ENST00000391813 SAYSD1Q9NPB0 183 aa21.08■□□□□ 0.96
SHANK1-203ENST00000391813 RNF181Q9P0P0 153 aa21.08■□□□□ 0.96
SHANK1-203ENST00000391813 SUGT1Q9Y2Z0 365 aa21.08■□□□□ 0.96
SHANK1-203ENST00000391813 GSTA1P08263 222 aa21.08■□□□□ 0.96
SHANK1-203ENST00000391813 GSTA2P09210 222 aa21.08■□□□□ 0.96
SHANK1-203ENST00000391813 EEF1DP29692 281 aaKnown RBP21.08■□□□□ 0.96
SHANK1-203ENST00000391813 TMPRSS15P98073 1019 aa21.08■□□□□ 0.96
SHANK1-203ENST00000391813 EXOSC10Q01780 885 aaKnown RBP21.08■□□□□ 0.96
SHANK1-203ENST00000391813 MECOMQ03112 1051 aa21.08■□□□□ 0.96
SHANK1-203ENST00000391813 SGMS1Q86VZ5 419 aa21.08■□□□□ 0.96
SHANK1-203ENST00000391813 SLC10A4Q96EP9 437 aa21.08■□□□□ 0.96
SHANK1-203ENST00000391813 NCAPG2Q86XI2 1143 aa21.07■□□□□ 0.96
SHANK1-203ENST00000391813 RFX6Q8HWS3 928 aa21.07■□□□□ 0.96
SHANK1-203ENST00000391813 TAB3Q8N5C8 712 aaPredicted RBP21.07■□□□□ 0.96
SHANK1-203ENST00000391813 C2orf69Q8N8R5 385 aa21.07■□□□□ 0.96
SHANK1-203ENST00000391813 CLIC2O15247 247 aa21.07■□□□□ 0.96
SHANK1-203ENST00000391813 SH3BP5O60239 455 aa21.07■□□□□ 0.96
SHANK1-203ENST00000391813 ECE2O60344 883 aa21.07■□□□□ 0.96
SHANK1-203ENST00000391813 BASP1P80723 227 aaKnown RBP21.07■□□□□ 0.96
SHANK1-203ENST00000391813 CYB5D1Q6P9G0 228 aa21.07■□□□□ 0.96
SHANK1-203ENST00000391813 ENGASEQ8NFI3 743 aa21.07■□□□□ 0.96
SHANK1-203ENST00000391813 DYNLL1P63167 89 aaKnown RBP21.07■□□□□ 0.96
SHANK1-203ENST00000391813 KLHL38Q2WGJ6 581 aa21.07■□□□□ 0.96
SHANK1-203ENST00000391813 XKR9Q5GH70 373 aa21.07■□□□□ 0.96
SHANK1-203ENST00000391813 LCORLQ8N3X6 602 aa21.07■□□□□ 0.96
SHANK1-203ENST00000391813 GLG1Q92896 1179 aa21.07■□□□□ 0.96
SHANK1-203ENST00000391813 PLA2G12BQ9BX93 195 aa21.07■□□□□ 0.96
SHANK1-203ENST00000391813 PNMA3Q9UL41 463 aa21.07■□□□□ 0.96
SHANK1-203ENST00000391813 APOBEC2Q9Y235 224 aaKnown RBP21.07■□□□□ 0.96
SHANK1-203ENST00000391813 COPEO14579 308 aa21.06■□□□□ 0.96
SHANK1-203ENST00000391813 PPP1R12AO14974 1030 aaPredicted RBP21.06■□□□□ 0.96
SHANK1-203ENST00000391813 FOXN1O15353 648 aa21.06■□□□□ 0.96
SHANK1-203ENST00000391813 ANXA13P27216 316 aa21.06■□□□□ 0.96
SHANK1-203ENST00000391813 ARL4CP56559 192 aa21.06■□□□□ 0.96
SHANK1-203ENST00000391813 R3HDM1Q15032 1099 aaKnown RBP21.06■□□□□ 0.96
SHANK1-203ENST00000391813 FSCBQ5H9T9 825 aa21.06■□□□□ 0.96
SHANK1-203ENST00000391813 TMCO4Q5TGY1 634 aa21.06■□□□□ 0.96
SHANK1-203ENST00000391813 DGKHQ86XP1 1220 aa21.06■□□□□ 0.96
SHANK1-203ENST00000391813 ZIM3Q96PE6 472 aa21.06■□□□□ 0.96
SHANK1-203ENST00000391813 TRIM56Q9BRZ2 755 aaKnown RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms