RNA–Protein interactions for RNA: ENST00000390882.1

RNU6-440P-201, Transcript of RNA, U6 small nuclear 440, pseudogene, humanhuman

BASIC

Gene RNU6-440P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-440P-201ENST00000390882 GLRBP48167 497 aa2.34□□□□□ -2.03
RNU6-440P-201ENST00000390882 PHC1P78364 1004 aa2.34□□□□□ -2.03
RNU6-440P-201ENST00000390882 SMAD3P84022 425 aaKnown RBP2.34□□□□□ -2.03
RNU6-440P-201ENST00000390882 AMPD3Q01432 767 aa2.34□□□□□ -2.03
RNU6-440P-201ENST00000390882 ADAM9Q13443 819 aa2.34□□□□□ -2.03
RNU6-440P-201ENST00000390882 SMAD4Q13485 552 aaKnown RBP2.34□□□□□ -2.03
RNU6-440P-201ENST00000390882 LRRC32Q14392 662 aa2.34□□□□□ -2.03
RNU6-440P-201ENST00000390882 EPHA7Q15375 998 aa2.34□□□□□ -2.03
RNU6-440P-201ENST00000390882 SMAD2Q15796 467 aaKnown RBP2.34□□□□□ -2.03
RNU6-440P-201ENST00000390882 SKIDA1Q1XH10 827 aa2.34□□□□□ -2.03
RNU6-440P-201ENST00000390882 ATP13A4Q4VNC1 1196 aa2.34□□□□□ -2.03
RNU6-440P-201ENST00000390882 EPHA10Q5JZY3 1008 aa2.34□□□□□ -2.03
RNU6-440P-201ENST00000390882 CATSPEREQ5SY80 951 aa2.34□□□□□ -2.03
RNU6-440P-201ENST00000390882 GPR158Q5T848 1215 aa2.34□□□□□ -2.03
RNU6-440P-201ENST00000390882 PRAMEF18Q5VWM3 479 aa2.34□□□□□ -2.03
RNU6-440P-201ENST00000390882 RNF219Q5W0B1 726 aaPredicted RBP2.34□□□□□ -2.03
RNU6-440P-201ENST00000390882 CREB3L3Q68CJ9 461 aa2.34□□□□□ -2.03
RNU6-440P-201ENST00000390882 IGFL4Q6B9Z1 124 aa2.34□□□□□ -2.03
RNU6-440P-201ENST00000390882 FSTL4Q6MZW2 842 aa2.34□□□□□ -2.03
RNU6-440P-201ENST00000390882 CXXC5Q7LFL8 322 aaKnown RBP2.34□□□□□ -2.03
RNU6-440P-201ENST00000390882 DTX3Q8N9I9 347 aa2.34□□□□□ -2.03
RNU6-440P-201ENST00000390882 ZNF610Q8N9Z0 462 aa2.34□□□□□ -2.03
RNU6-440P-201ENST00000390882 WDR66Q8TBY9 1149 aa2.34□□□□□ -2.03
RNU6-440P-201ENST00000390882 CALML6Q8TD86 181 aa2.34□□□□□ -2.03
RNU6-440P-201ENST00000390882 ASB15Q8WXK1 588 aa2.34□□□□□ -2.03
RNU6-440P-201ENST00000390882 ERCC4Q92889 916 aaPredicted RBP2.34□□□□□ -2.03
RNU6-440P-201ENST00000390882 ZNF503Q96F45 646 aa2.34□□□□□ -2.03
RNU6-440P-201ENST00000390882 C16orf92Q96LL3 132 aa2.34□□□□□ -2.03
RNU6-440P-201ENST00000390882 WRNIP1Q96S55 665 aa2.34□□□□□ -2.03
RNU6-440P-201ENST00000390882 BTBD2Q9BX70 525 aa2.34□□□□□ -2.03
RNU6-440P-201ENST00000390882 SLC39A2Q9NP94 309 aa2.34□□□□□ -2.03
RNU6-440P-201ENST00000390882 PCDH12Q9NPG4 1184 aa2.34□□□□□ -2.03
RNU6-440P-201ENST00000390882 SPATA6Q9NWH7 488 aaPredicted RBP2.34□□□□□ -2.03
RNU6-440P-201ENST00000390882 UCKL1Q9NWZ5 548 aa2.34□□□□□ -2.03
RNU6-440P-201ENST00000390882 H2AFY2Q9P0M6 372 aaPredicted RBP2.34□□□□□ -2.03
RNU6-440P-201ENST00000390882 PPP4R1LQ9P1A2 415 aa2.34□□□□□ -2.03
RNU6-440P-201ENST00000390882 RBPJLQ9UBG7 517 aa2.34□□□□□ -2.03
RNU6-440P-201ENST00000390882 KCNG1Q9UIX4 513 aa2.34□□□□□ -2.03
RNU6-440P-201ENST00000390882 MCM8Q9UJA3 840 aa2.34□□□□□ -2.03
RNU6-440P-201ENST00000390882 CROTQ9UKG9 612 aa2.34□□□□□ -2.03
RNU6-440P-201ENST00000390882 ATP8A1Q9Y2Q0 1164 aa2.34□□□□□ -2.03
RNU6-440P-201ENST00000390882 COL4A3BPQ9Y5P4 624 aa2.34□□□□□ -2.03
RNU6-440P-201ENST00000390882 PHLDB1Q86UU1 1377 aa2.34□□□□□ -2.04
RNU6-440P-201ENST00000390882 UBA6A0AVT1 1052 aaPredicted RBP2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 MROH6A6NGR9 719 aa2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 DDX3XO00571 662 aaKnown RBP eCLIP2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 MAFGO15525 162 aa2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 GPR39O43194 453 aa2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 LAMTOR5O43504 91 aa2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 NARSO43776 548 aaKnown RBP2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 RAB11FIP3O75154 756 aa2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 FBXO21O94952 628 aa2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 MPIG6BO95866 241 aa2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 IL18BPO95998 194 aa2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 POU3F3P20264 500 aaPredicted RBP2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 CD40P25942 277 aa2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 THBS2P35442 1172 aa2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 ID4P47928 161 aa2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 MLLT6P55198 1093 aaPredicted RBP2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 SESN3P58005 492 aa2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 IGBP1P78318 339 aa2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 MRPS21P82921 87 aaKnown RBP2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 ALDH6A1Q02252 535 aaKnown RBP2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 ROM1Q03395 351 aa2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 STAT4Q14765 748 aa2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 TERF2Q15554 542 aa2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 RGL3Q3MIN7 710 aa2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 TTC38Q5R3I4 469 aa2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 PRR31Q5SQ13 230 aa2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 BROXQ5VW32 411 aa2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 ZKSCAN2Q63HK3 967 aa2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 TIGD7Q6NT04 549 aaPredicted RBP2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 FRMD7Q6ZUT3 714 aa2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 RTN4RL1Q86UN2 441 aaPredicted RBP2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 RASSF3Q86WH2 238 aa2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 CIR1Q86X95 450 aaPredicted RBP2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 PHYKPLQ8IUZ5 450 aa2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 STPG3Q8N7X2 389 aa2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 SLC5A5Q92911 643 aa2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 FOXRED1Q96CU9 486 aaPredicted RBP2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 MAML3Q96JK9 1138 aa2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 AMNQ9BXJ7 453 aa2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 FAM126AQ9BYI3 521 aaPredicted RBP2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 EMC7Q9NPA0 242 aa2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 INCENPQ9NQS7 918 aa2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 KCND1Q9NSA2 647 aa2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 USP36Q9P275 1121 aaKnown RBP2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 ZFP69BQ9UJL9 534 aa2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 APOBEC2Q9Y235 224 aaKnown RBP2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 NOP58Q9Y2X3 529 aaKnown RBP2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 NOC2LQ9Y3T9 749 aaKnown RBP2.33□□□□□ -2.04
RNU6-440P-201ENST00000390882 hCG_2014768A0A024R1R8 64 aa2.32□□□□□ -2.04
RNU6-440P-201ENST00000390882 ALG1L2C9J202 215 aa2.32□□□□□ -2.04
RNU6-440P-201ENST00000390882 H0Y858 1186 aa2.32□□□□□ -2.04
RNU6-440P-201ENST00000390882 GPR42O15529 346 aa2.32□□□□□ -2.04
RNU6-440P-201ENST00000390882 KNG1P01042 644 aa2.32□□□□□ -2.04
RNU6-440P-201ENST00000390882 CDK11BP21127 795 aaKnown RBP2.32□□□□□ -2.04
RNU6-440P-201ENST00000390882 APEX1P27695 318 aaKnown RBP2.32□□□□□ -2.04
RNU6-440P-201ENST00000390882 CTGFP29279 349 aa2.32□□□□□ -2.04
RNU6-440P-201ENST00000390882 MC4RP32245 332 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms