RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 RIC1Q4ADV7 1423 aa9.02□□□□□ -0.97
VPS36-201ENST00000378060 SSU72P8A0A1W2PR75 194 aa9.02□□□□□ -0.97
VPS36-201ENST00000378060 FAM170AA1A519 330 aa9.02□□□□□ -0.97
VPS36-201ENST00000378060 SETSIPP0DME0 302 aa9.02□□□□□ -0.97
VPS36-201ENST00000378060 RFX1P22670 979 aa9.02□□□□□ -0.97
VPS36-201ENST00000378060 GPC5P78333 572 aa9.02□□□□□ -0.97
VPS36-201ENST00000378060 ASPHQ12797 758 aa9.02□□□□□ -0.97
VPS36-201ENST00000378060 NAALADL2Q58DX5 795 aa9.02□□□□□ -0.97
VPS36-201ENST00000378060 SLC10A5Q5PT55 438 aa9.02□□□□□ -0.97
VPS36-201ENST00000378060 EXOC8Q8IYI6 725 aa9.02□□□□□ -0.97
VPS36-201ENST00000378060 ENGASEQ8NFI3 743 aa9.02□□□□□ -0.97
VPS36-201ENST00000378060 HNRNPLLQ8WVV9 542 aaKnown RBP9.02□□□□□ -0.97
VPS36-201ENST00000378060 NLRP7Q8WX94 980 aa9.02□□□□□ -0.97
VPS36-201ENST00000378060 KCNB2Q92953 911 aa9.02□□□□□ -0.97
VPS36-201ENST00000378060 EPC1Q9H2F5 836 aa9.02□□□□□ -0.97
VPS36-201ENST00000378060 L2HGDHQ9H9P8 463 aa9.02□□□□□ -0.97
VPS36-201ENST00000378060 DCP1AQ9NPI6 582 aaPredicted RBP9.02□□□□□ -0.97
VPS36-201ENST00000378060 SNX24Q9Y343 169 aa9.02□□□□□ -0.97
VPS36-201ENST00000378060 A6NJR5 290 aa9.01□□□□□ -0.97
VPS36-201ENST00000378060 ZNF609O15014 1411 aa9.01□□□□□ -0.97
VPS36-201ENST00000378060 FOXN1O15353 648 aa9.01□□□□□ -0.97
VPS36-201ENST00000378060 NR3C1P04150 777 aa9.01□□□□□ -0.97
VPS36-201ENST00000378060 KRT1P04264 644 aa9.01□□□□□ -0.97
VPS36-201ENST00000378060 CHRNA3P32297 505 aa9.01□□□□□ -0.97
VPS36-201ENST00000378060 SERPINB6P35237 376 aa9.01□□□□□ -0.97
VPS36-201ENST00000378060 NFRKBQ6P4R8 1299 aa9.01□□□□□ -0.97
VPS36-201ENST00000378060 TBC1D1Q86TI0 1168 aaPredicted RBP9.01□□□□□ -0.97
VPS36-201ENST00000378060 FAM160B2Q86V87 743 aa9.01□□□□□ -0.97
VPS36-201ENST00000378060 RFX6Q8HWS3 928 aa9.01□□□□□ -0.97
VPS36-201ENST00000378060 N4BP2L2Q92802 583 aaPredicted RBP9.01□□□□□ -0.97
VPS36-201ENST00000378060 SLX4Q8IY92 1834 aa9.01□□□□□ -0.97
VPS36-201ENST00000378060 MED7O43513 233 aa9.01□□□□□ -0.97
VPS36-201ENST00000378060 GPC4O75487 556 aa9.01□□□□□ -0.97
VPS36-201ENST00000378060 STAT2P52630 851 aa9.01□□□□□ -0.97
VPS36-201ENST00000378060 TFDP1Q14186 410 aa9.01□□□□□ -0.97
VPS36-201ENST00000378060 MTF1Q14872 753 aa9.01□□□□□ -0.97
VPS36-201ENST00000378060 SURF1Q15526 300 aa9.01□□□□□ -0.97
VPS36-201ENST00000378060 DIXDC1Q155Q3 683 aa9.01□□□□□ -0.97
VPS36-201ENST00000378060 UBE2SQ16763 222 aa9.01□□□□□ -0.97
VPS36-201ENST00000378060 DOK7Q18PE1 504 aa9.01□□□□□ -0.97
VPS36-201ENST00000378060 SRLQ86TD4 932 aa9.01□□□□□ -0.97
VPS36-201ENST00000378060 TC2NQ8N9U0 490 aa9.01□□□□□ -0.97
VPS36-201ENST00000378060 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.01□□□□□ -0.97
VPS36-201ENST00000378060 GJA3Q9Y6H8 435 aa9.01□□□□□ -0.97
VPS36-201ENST00000378060 PFASO15067 1338 aa9.01□□□□□ -0.97
VPS36-201ENST00000378060 CFAP73A6NFT4 308 aa9.01□□□□□ -0.97
VPS36-201ENST00000378060 ZBTB5O15062 677 aa9.01□□□□□ -0.97
VPS36-201ENST00000378060 ZRANB2O95218 330 aaKnown RBP eCLIP9.01□□□□□ -0.97
VPS36-201ENST00000378060 ATP1A1P05023 1023 aaKnown RBP9.01□□□□□ -0.97
VPS36-201ENST00000378060 SRGNP10124 158 aa9.01□□□□□ -0.97
VPS36-201ENST00000378060 ESRRAP11474 423 aaPredicted RBP9.01□□□□□ -0.97
VPS36-201ENST00000378060 CNGA1P29973 690 aa9.01□□□□□ -0.97
VPS36-201ENST00000378060 MAGOHP61326 146 aaKnown RBP9.01□□□□□ -0.97
VPS36-201ENST00000378060 COASYQ13057 564 aa9.01□□□□□ -0.97
VPS36-201ENST00000378060 KNOP1Q1ED39 458 aaKnown RBP9.01□□□□□ -0.97
VPS36-201ENST00000378060 NXNQ6DKJ4 435 aa9.01□□□□□ -0.97
VPS36-201ENST00000378060 NLRP14Q86W24 1093 aa9.01□□□□□ -0.97
VPS36-201ENST00000378060 MMS19Q96T76 1030 aa9.01□□□□□ -0.97
VPS36-201ENST00000378060 PCIF1Q9H4Z3 704 aa9.01□□□□□ -0.97
VPS36-201ENST00000378060 TBK1Q9UHD2 729 aa9.01□□□□□ -0.97
VPS36-201ENST00000378060 MID2Q9UJV3 735 aa9.01□□□□□ -0.97
VPS36-201ENST00000378060 ANGPTL2Q9UKU9 493 aa9.01□□□□□ -0.97
VPS36-201ENST00000378060 A0A1B0GUL6 1792 aa9.01□□□□□ -0.97
VPS36-201ENST00000378060 IQANK1A0A1B0GTG1 560 aa9□□□□□ -0.97
VPS36-201ENST00000378060 CAPN9O14815 690 aa9□□□□□ -0.97
VPS36-201ENST00000378060 DPEP1P16444 411 aa9□□□□□ -0.97
VPS36-201ENST00000378060 GFPT1Q06210 699 aaPredicted RBP9□□□□□ -0.97
VPS36-201ENST00000378060 GRAPQ13588 217 aa9□□□□□ -0.97
VPS36-201ENST00000378060 PDIA5Q14554 519 aa9□□□□□ -0.97
VPS36-201ENST00000378060 SF3B3Q15393 1217 aaKnown RBP9□□□□□ -0.97
VPS36-201ENST00000378060 ADSSL1Q8N142 457 aa9□□□□□ -0.97
VPS36-201ENST00000378060 GRAPLQ8TC17 118 aaPredicted RBP9□□□□□ -0.97
VPS36-201ENST00000378060 ZNF512BQ96KM6 892 aaPredicted RBP9□□□□□ -0.97
VPS36-201ENST00000378060 CEP170P1Q96L14 293 aa9□□□□□ -0.97
VPS36-201ENST00000378060 TTC25Q96NG3 672 aa9□□□□□ -0.97
VPS36-201ENST00000378060 SUGCTQ9HAC7 445 aa9□□□□□ -0.97
VPS36-201ENST00000378060 HDAC6Q9UBN7 1215 aa9□□□□□ -0.97
VPS36-201ENST00000378060 ANKRD65E5RJM6 399 aa9□□□□□ -0.97
VPS36-201ENST00000378060 PPP1R37O75864 691 aa9□□□□□ -0.97
VPS36-201ENST00000378060 GGPS1O95749 300 aa9□□□□□ -0.97
VPS36-201ENST00000378060 CPP00450 1065 aa9□□□□□ -0.97
VPS36-201ENST00000378060 CRY2Q49AN0 593 aa9□□□□□ -0.97
VPS36-201ENST00000378060 ATG16L1Q676U5 607 aa9□□□□□ -0.97
VPS36-201ENST00000378060 PDXDC1Q6P996 788 aa9□□□□□ -0.97
VPS36-201ENST00000378060 IGDCC4Q8TDY8 1250 aa9□□□□□ -0.97
VPS36-201ENST00000378060 PYROXD1Q8WU10 500 aa9□□□□□ -0.97
VPS36-201ENST00000378060 DCAF4Q8WV16 495 aa9□□□□□ -0.97
VPS36-201ENST00000378060 RBM41Q96IZ5 413 aaKnown RBP9□□□□□ -0.97
VPS36-201ENST00000378060 ANKFY1Q9P2R3 1169 aa9□□□□□ -0.97
VPS36-201ENST00000378060 EPS15L1Q9UBC2 864 aa9□□□□□ -0.97
VPS36-201ENST00000378060 AFG3L2Q9Y4W6 797 aa9□□□□□ -0.97
VPS36-201ENST00000378060 ZNF233A6NK53 670 aa9□□□□□ -0.97
VPS36-201ENST00000378060 ACSL3O95573 720 aa9□□□□□ -0.97
VPS36-201ENST00000378060 ZSCAN20P17040 1043 aaPredicted RBP9□□□□□ -0.97
VPS36-201ENST00000378060 RFC1P35251 1148 aaPredicted RBP9□□□□□ -0.97
VPS36-201ENST00000378060 DHX34Q14147 1143 aaKnown RBP9□□□□□ -0.97
VPS36-201ENST00000378060 CCNI2Q6ZMN8 369 aaPredicted RBP9□□□□□ -0.97
VPS36-201ENST00000378060 RBM43Q6ZSC3 357 aaKnown RBP9□□□□□ -0.97
VPS36-201ENST00000378060 TTC13Q8NBP0 860 aa9□□□□□ -0.97
VPS36-201ENST00000378060 ANKRD36BP1Q96IX9 119 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms