RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 TCF20Q9UGU0 1960 aaKnown RBP20.2■□□□□ 0.82
TRAPPC3-202ENST00000373162 P4HBP07237 508 aaKnown RBP20.19■□□□□ 0.82
TRAPPC3-202ENST00000373162 TIGD5Q53EQ6 642 aa20.19■□□□□ 0.82
TRAPPC3-202ENST00000373162 PLA2G4FQ68DD2 849 aa20.19■□□□□ 0.82
TRAPPC3-202ENST00000373162 MTMR9Q96QG7 549 aa20.19■□□□□ 0.82
TRAPPC3-202ENST00000373162 LLPHQ9BRT6 129 aaKnown RBP20.19■□□□□ 0.82
TRAPPC3-202ENST00000373162 C11orf84Q9BUA3 381 aaPredicted RBP20.19■□□□□ 0.82
TRAPPC3-202ENST00000373162 DHX33Q9H6R0 707 aaKnown RBP20.19■□□□□ 0.82
TRAPPC3-202ENST00000373162 UBE2ZQ9H832 354 aaPredicted RBP20.19■□□□□ 0.82
TRAPPC3-202ENST00000373162 TMEM161AQ9NX61 479 aa20.19■□□□□ 0.82
TRAPPC3-202ENST00000373162 ATF7P17544 494 aaPredicted RBP20.18■□□□□ 0.82
TRAPPC3-202ENST00000373162 NPEPPSP55786 919 aa20.18■□□□□ 0.82
TRAPPC3-202ENST00000373162 SKIV2LQ15477 1246 aaKnown RBP20.18■□□□□ 0.82
TRAPPC3-202ENST00000373162 PTPROQ16827 1216 aa20.18■□□□□ 0.82
TRAPPC3-202ENST00000373162 AAK1Q2M2I8 961 aa20.18■□□□□ 0.82
TRAPPC3-202ENST00000373162 CCDC83Q8IWF9 413 aa20.18■□□□□ 0.82
TRAPPC3-202ENST00000373162 ZNF668Q96K58 619 aaPredicted RBP20.18■□□□□ 0.82
TRAPPC3-202ENST00000373162 BRMS1Q9HCU9 246 aa20.18■□□□□ 0.82
TRAPPC3-202ENST00000373162 CYP26B1Q9NR63 512 aa20.18■□□□□ 0.82
TRAPPC3-202ENST00000373162 PPME1Q9Y570 386 aa20.18■□□□□ 0.82
TRAPPC3-202ENST00000373162 LYPLA2O95372 231 aa20.17■□□□□ 0.82
TRAPPC3-202ENST00000373162 DNAJB1P25685 340 aa20.17■□□□□ 0.82
TRAPPC3-202ENST00000373162 NAALADL2Q58DX5 795 aa20.17■□□□□ 0.82
TRAPPC3-202ENST00000373162 TCEAL5Q5H9L2 206 aa20.17■□□□□ 0.82
TRAPPC3-202ENST00000373162 FAM102BQ5T8I3 360 aa20.17■□□□□ 0.82
TRAPPC3-202ENST00000373162 ZNF598Q86UK7 904 aaKnown RBP20.17■□□□□ 0.82
TRAPPC3-202ENST00000373162 SLFN12Q8IYM2 578 aa20.17■□□□□ 0.82
TRAPPC3-202ENST00000373162 HSD17B14Q9BPX1 270 aa20.17■□□□□ 0.82
TRAPPC3-202ENST00000373162 LXNQ9BS40 222 aa20.17■□□□□ 0.82
TRAPPC3-202ENST00000373162 RGL1Q9NZL6 768 aa20.17■□□□□ 0.82
TRAPPC3-202ENST00000373162 HCSTQ9UBK5 93 aa20.17■□□□□ 0.82
TRAPPC3-202ENST00000373162 PLAGL2Q9UPG8 496 aa20.17■□□□□ 0.82
TRAPPC3-202ENST00000373162 DENND3A2RUS2 1198 aa20.16■□□□□ 0.82
TRAPPC3-202ENST00000373162 DDX11L8A8MPP1 907 aa20.16■□□□□ 0.82
TRAPPC3-202ENST00000373162 SLITRK3O94933 977 aa20.16■□□□□ 0.82
TRAPPC3-202ENST00000373162 ITGB1P05556 798 aa20.16■□□□□ 0.82
TRAPPC3-202ENST00000373162 CTC1Q2NKJ3 1217 aa20.16■□□□□ 0.82
TRAPPC3-202ENST00000373162 PAN2Q504Q3 1202 aaKnown RBP20.16■□□□□ 0.82
TRAPPC3-202ENST00000373162 ZNF410Q86VK4 478 aa20.16■□□□□ 0.82
TRAPPC3-202ENST00000373162 SPPL3Q8TCT6 385 aa20.16■□□□□ 0.82
TRAPPC3-202ENST00000373162 NEK9Q8TD19 979 aa20.16■□□□□ 0.82
TRAPPC3-202ENST00000373162 DYDC2Q96IM9 177 aa20.16■□□□□ 0.82
TRAPPC3-202ENST00000373162 TRAIPQ9BWF2 469 aa20.16■□□□□ 0.82
TRAPPC3-202ENST00000373162 TMEM60Q9H2L4 133 aa20.16■□□□□ 0.82
TRAPPC3-202ENST00000373162 NSUN3Q9H649 340 aaKnown RBP20.16■□□□□ 0.82
TRAPPC3-202ENST00000373162 CWH43Q9H720 699 aa20.16■□□□□ 0.82
TRAPPC3-202ENST00000373162 A0A087WZ62 844 aa20.15■□□□□ 0.82
TRAPPC3-202ENST00000373162 TNFRSF10AO00220 468 aa20.15■□□□□ 0.82
TRAPPC3-202ENST00000373162 DKC1O60832 514 aaKnown RBP eCLIP20.15■□□□□ 0.82
TRAPPC3-202ENST00000373162 FGFR4P22455 802 aa20.15■□□□□ 0.82
TRAPPC3-202ENST00000373162 FOSBP53539 338 aa20.15■□□□□ 0.82
TRAPPC3-202ENST00000373162 LEXMQ3ZCV2 418 aa20.15■□□□□ 0.82
TRAPPC3-202ENST00000373162 ECHDC2Q86YB7 292 aa20.15■□□□□ 0.82
TRAPPC3-202ENST00000373162 ZSCAN31Q96LW9 406 aaPredicted RBP20.15■□□□□ 0.82
TRAPPC3-202ENST00000373162 NECAB3Q96P71 396 aaPredicted RBP20.15■□□□□ 0.82
TRAPPC3-202ENST00000373162 UHRF1Q96T88 793 aaPredicted RBP20.15■□□□□ 0.82
TRAPPC3-202ENST00000373162 FDXACB1Q9BRP7 624 aaPredicted RBP20.15■□□□□ 0.82
TRAPPC3-202ENST00000373162 IFT122Q9HBG6 1241 aa20.15■□□□□ 0.82
TRAPPC3-202ENST00000373162 XPNPEP1Q9NQW7 623 aa20.15■□□□□ 0.82
TRAPPC3-202ENST00000373162 SH2B1Q9NRF2 756 aaPredicted RBP20.15■□□□□ 0.82
TRAPPC3-202ENST00000373162 PCDHB7Q9Y5E2 793 aa20.15■□□□□ 0.82
TRAPPC3-202ENST00000373162 ZBTB39O15060 712 aa20.14■□□□□ 0.81
TRAPPC3-202ENST00000373162 FGFR1P11362 822 aa20.14■□□□□ 0.81
TRAPPC3-202ENST00000373162 LTBRP36941 435 aa20.14■□□□□ 0.81
TRAPPC3-202ENST00000373162 CDC42EP1Q00587 391 aa20.14■□□□□ 0.81
TRAPPC3-202ENST00000373162 NCAPH2Q6IBW4 605 aa20.14■□□□□ 0.81
TRAPPC3-202ENST00000373162 KLHL23Q8NBE8 558 aa20.14■□□□□ 0.81
TRAPPC3-202ENST00000373162 FBXO18Q8NFZ0 1043 aa20.14■□□□□ 0.81
TRAPPC3-202ENST00000373162 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.14■□□□□ 0.81
TRAPPC3-202ENST00000373162 PABPC5Q96DU9 382 aaKnown RBP20.14■□□□□ 0.81
TRAPPC3-202ENST00000373162 CASD1Q96PB1 797 aa20.14■□□□□ 0.81
TRAPPC3-202ENST00000373162 SUCLA2Q9P2R7 463 aaPredicted RBP20.14■□□□□ 0.81
TRAPPC3-202ENST00000373162 LRFN2Q9ULH4 789 aa20.14■□□□□ 0.81
TRAPPC3-202ENST00000373162 A0A0U1RQF3 1178 aa20.13■□□□□ 0.81
TRAPPC3-202ENST00000373162 NEMFO60524 1076 aa20.13■□□□□ 0.81
TRAPPC3-202ENST00000373162 CSDE1O75534 798 aaKnown RBP20.13■□□□□ 0.81
TRAPPC3-202ENST00000373162 YWHABP31946 246 aaKnown RBP20.13■□□□□ 0.81
TRAPPC3-202ENST00000373162 GUCY1B3Q02153 619 aa20.13■□□□□ 0.81
TRAPPC3-202ENST00000373162 HYAL1Q12794 435 aa20.13■□□□□ 0.81
TRAPPC3-202ENST00000373162 CALCRLQ16602 461 aa20.13■□□□□ 0.81
TRAPPC3-202ENST00000373162 CLLU1OSQ5K130 101 aa20.13■□□□□ 0.81
TRAPPC3-202ENST00000373162 LRRC55Q6ZSA7 311 aa20.13■□□□□ 0.81
TRAPPC3-202ENST00000373162 KSR1Q8IVT5 923 aa20.13■□□□□ 0.81
TRAPPC3-202ENST00000373162 NLRP7Q8WX94 980 aa20.13■□□□□ 0.81
TRAPPC3-202ENST00000373162 EIF2AK1Q9BQI3 630 aaKnown RBP20.13■□□□□ 0.81
TRAPPC3-202ENST00000373162 JPH2Q9BR39 696 aaPredicted RBP20.13■□□□□ 0.81
TRAPPC3-202ENST00000373162 GCOM2Q9BZD3 368 aaPredicted RBP20.13■□□□□ 0.81
TRAPPC3-202ENST00000373162 TMEM117Q9H0C3 514 aa20.13■□□□□ 0.81
TRAPPC3-202ENST00000373162 ZSWIM4Q9H7M6 989 aa20.13■□□□□ 0.81
TRAPPC3-202ENST00000373162 ATP6V0A4Q9HBG4 840 aa20.13■□□□□ 0.81
TRAPPC3-202ENST00000373162 ALG13Q9NP73 1137 aaKnown RBP20.13■□□□□ 0.81
TRAPPC3-202ENST00000373162 RNF216Q9NWF9 866 aaPredicted RBP20.13■□□□□ 0.81
TRAPPC3-202ENST00000373162 TBKBP1A7MCY6 615 aa20.12■□□□□ 0.81
TRAPPC3-202ENST00000373162 BAG4O95429 457 aaKnown RBP20.12■□□□□ 0.81
TRAPPC3-202ENST00000373162 RFC5P40937 340 aa20.12■□□□□ 0.81
TRAPPC3-202ENST00000373162 HMGN5P82970 282 aaKnown RBP20.12■□□□□ 0.81
TRAPPC3-202ENST00000373162 CYP4A11Q02928 519 aa20.12■□□□□ 0.81
TRAPPC3-202ENST00000373162 TRIM29Q14134 588 aa20.12■□□□□ 0.81
TRAPPC3-202ENST00000373162 CTTNQ14247 550 aaKnown RBP20.12■□□□□ 0.81
TRAPPC3-202ENST00000373162 C8orf76Q96K31 380 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 165.2 ms