RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 NKX2-4Q9H2Z4 354 aa6.65□□□□□ -1.34
RNU4-4P-201ENST00000364588 HYPKQ9NX55 129 aa6.65□□□□□ -1.34
RNU4-4P-201ENST00000364588 POLLQ9UGP5 575 aa6.65□□□□□ -1.34
RNU4-4P-201ENST00000364588 MBD1Q9UIS9 605 aaPredicted RBP6.65□□□□□ -1.34
RNU4-4P-201ENST00000364588 ADM5C9JUS6 153 aa6.64□□□□□ -1.35
RNU4-4P-201ENST00000364588 ECE2O60344 883 aa6.64□□□□□ -1.35
RNU4-4P-201ENST00000364588 HOXB7P09629 217 aa6.64□□□□□ -1.35
RNU4-4P-201ENST00000364588 SDHBP21912 280 aa6.64□□□□□ -1.35
RNU4-4P-201ENST00000364588 MAPKAPK2P49137 400 aa6.64□□□□□ -1.35
RNU4-4P-201ENST00000364588 HUNKP57058 714 aa6.64□□□□□ -1.35
RNU4-4P-201ENST00000364588 RPS8P62241 208 aaKnown RBP6.64□□□□□ -1.35
RNU4-4P-201ENST00000364588 SCRN1Q12765 414 aa6.64□□□□□ -1.35
RNU4-4P-201ENST00000364588 CBX2Q14781 532 aaPredicted RBP6.64□□□□□ -1.35
RNU4-4P-201ENST00000364588 ZC3H14Q6PJT7 736 aaKnown RBP6.64□□□□□ -1.35
RNU4-4P-201ENST00000364588 PAQR3Q6TCH7 311 aa6.64□□□□□ -1.35
RNU4-4P-201ENST00000364588 RPTNQ6XPR3 784 aa6.64□□□□□ -1.35
RNU4-4P-201ENST00000364588 KRT26Q7Z3Y9 468 aa6.64□□□□□ -1.35
RNU4-4P-201ENST00000364588 CILP2Q8IUL8 1156 aa6.64□□□□□ -1.35
RNU4-4P-201ENST00000364588 TBC1D16Q8TBP0 767 aa6.64□□□□□ -1.35
RNU4-4P-201ENST00000364588 HNRNPLLQ8WVV9 542 aaKnown RBP6.64□□□□□ -1.35
RNU4-4P-201ENST00000364588 DPF2Q92785 391 aa6.64□□□□□ -1.35
RNU4-4P-201ENST00000364588 COPS5Q92905 334 aa6.64□□□□□ -1.35
RNU4-4P-201ENST00000364588 MRGPRX3Q96LB0 322 aa6.64□□□□□ -1.35
RNU4-4P-201ENST00000364588 MYD88Q99836 296 aa6.64□□□□□ -1.35
RNU4-4P-201ENST00000364588 KLHL14Q9P2G3 628 aa6.64□□□□□ -1.35
RNU4-4P-201ENST00000364588 SMG5Q9UPR3 1016 aaKnown RBP6.64□□□□□ -1.35
RNU4-4P-201ENST00000364588 RTL9Q8NET4 1388 aa6.64□□□□□ -1.35
RNU4-4P-201ENST00000364588 SPEF2Q9C093 1822 aa6.64□□□□□ -1.35
RNU4-4P-201ENST00000364588 APAF1O14727 1248 aa6.63□□□□□ -1.35
RNU4-4P-201ENST00000364588 NPHS1O60500 1241 aa6.63□□□□□ -1.35
RNU4-4P-201ENST00000364588 ASTN2O75129 1339 aaPredicted RBP6.63□□□□□ -1.35
RNU4-4P-201ENST00000364588 UFL1O94874 794 aa6.63□□□□□ -1.35
RNU4-4P-201ENST00000364588 GJB6O95452 261 aa6.63□□□□□ -1.35
RNU4-4P-201ENST00000364588 DBHP09172 617 aa6.63□□□□□ -1.35
RNU4-4P-201ENST00000364588 MSL3P1P0C860 447 aa6.63□□□□□ -1.35
RNU4-4P-201ENST00000364588 DDR2Q16832 855 aa6.63□□□□□ -1.35
RNU4-4P-201ENST00000364588 NAALADL2Q58DX5 795 aa6.63□□□□□ -1.35
RNU4-4P-201ENST00000364588 MRM1Q6IN84 353 aaKnown RBP6.63□□□□□ -1.35
RNU4-4P-201ENST00000364588 ANKS3Q6ZW76 656 aa6.63□□□□□ -1.35
RNU4-4P-201ENST00000364588 LZTR1Q8N653 840 aa6.63□□□□□ -1.35
RNU4-4P-201ENST00000364588 ZBTB38Q8NAP3 1195 aaPredicted RBP6.63□□□□□ -1.35
RNU4-4P-201ENST00000364588 DCPSQ96C86 337 aaKnown RBP6.63□□□□□ -1.35
RNU4-4P-201ENST00000364588 SIGLEC10Q96LC7 697 aa6.63□□□□□ -1.35
RNU4-4P-201ENST00000364588 EYA3Q99504 573 aa6.63□□□□□ -1.35
RNU4-4P-201ENST00000364588 GCM1Q9NP62 436 aa6.63□□□□□ -1.35
RNU4-4P-201ENST00000364588 CYP26B1Q9NR63 512 aa6.63□□□□□ -1.35
RNU4-4P-201ENST00000364588 ARID1BQ8NFD5 2236 aaPredicted RBP6.62□□□□□ -1.35
RNU4-4P-201ENST00000364588 PSME4Q14997 1843 aa6.62□□□□□ -1.35
RNU4-4P-201ENST00000364588 N4BP3O15049 544 aa6.62□□□□□ -1.35
RNU4-4P-201ENST00000364588 CA12O43570 354 aa6.62□□□□□ -1.35
RNU4-4P-201ENST00000364588 STK10O94804 968 aaKnown RBP6.62□□□□□ -1.35
RNU4-4P-201ENST00000364588 ZNF853P0CG23 659 aa6.62□□□□□ -1.35
RNU4-4P-201ENST00000364588 TACR1P25103 407 aa6.62□□□□□ -1.35
RNU4-4P-201ENST00000364588 RPS12P25398 132 aaKnown RBP6.62□□□□□ -1.35
RNU4-4P-201ENST00000364588 NOGQ13253 232 aa6.62□□□□□ -1.35
RNU4-4P-201ENST00000364588 SLC10A6Q3KNW5 377 aa6.62□□□□□ -1.35
RNU4-4P-201ENST00000364588 C2orf69Q8N8R5 385 aa6.62□□□□□ -1.35
RNU4-4P-201ENST00000364588 C8orf58Q8NAV2 365 aa6.62□□□□□ -1.35
RNU4-4P-201ENST00000364588 NETO2Q8NC67 525 aa6.62□□□□□ -1.35
RNU4-4P-201ENST00000364588 BTN2A2Q8WVV5 523 aa6.62□□□□□ -1.35
RNU4-4P-201ENST00000364588 CCDC140Q96MF4 163 aa6.62□□□□□ -1.35
RNU4-4P-201ENST00000364588 MMP19Q99542 508 aa6.62□□□□□ -1.35
RNU4-4P-201ENST00000364588 GBA2Q9HCG7 927 aaPredicted RBP6.62□□□□□ -1.35
RNU4-4P-201ENST00000364588 GGA3Q9NZ52 723 aa6.62□□□□□ -1.35
RNU4-4P-201ENST00000364588 NUDT5Q9UKK9 219 aa6.62□□□□□ -1.35
RNU4-4P-201ENST00000364588 CNOT6Q9ULM6 557 aaKnown RBP6.62□□□□□ -1.35
RNU4-4P-201ENST00000364588 IRAK3Q9Y616 596 aa6.62□□□□□ -1.35
RNU4-4P-201ENST00000364588 AKAP11Q9UKA4 1901 aa6.62□□□□□ -1.35
RNU4-4P-201ENST00000364588 MYH3P11055 1940 aa6.61□□□□□ -1.35
RNU4-4P-201ENST00000364588 NUAK1O60285 661 aa6.61□□□□□ -1.35
RNU4-4P-201ENST00000364588 PDE8AO60658 829 aa6.61□□□□□ -1.35
RNU4-4P-201ENST00000364588 PCCAP05165 728 aaPredicted RBP6.61□□□□□ -1.35
RNU4-4P-201ENST00000364588 ITGAVP06756 1048 aa6.61□□□□□ -1.35
RNU4-4P-201ENST00000364588 THBDP07204 575 aa6.61□□□□□ -1.35
RNU4-4P-201ENST00000364588 VIL1P09327 827 aaKnown RBP6.61□□□□□ -1.35
RNU4-4P-201ENST00000364588 PLS3P13797 630 aa6.61□□□□□ -1.35
RNU4-4P-201ENST00000364588 HOXC12P31275 282 aa6.61□□□□□ -1.35
RNU4-4P-201ENST00000364588 GNAI1P63096 354 aa6.61□□□□□ -1.35
RNU4-4P-201ENST00000364588 KCNAB2Q13303 367 aa6.61□□□□□ -1.35
RNU4-4P-201ENST00000364588 CCDC152Q4G0S7 254 aa6.61□□□□□ -1.35
RNU4-4P-201ENST00000364588 ZNF385BQ569K4 471 aa6.61□□□□□ -1.35
RNU4-4P-201ENST00000364588 E4F1Q66K89 784 aaPredicted RBP6.61□□□□□ -1.35
RNU4-4P-201ENST00000364588 IQCEQ6IPM2 695 aa6.61□□□□□ -1.35
RNU4-4P-201ENST00000364588 RGMBQ6NW40 437 aa6.61□□□□□ -1.35
RNU4-4P-201ENST00000364588 CKAP2LQ8IYA6 745 aa6.61□□□□□ -1.35
RNU4-4P-201ENST00000364588 CCDC191Q8NCU4 936 aa6.61□□□□□ -1.35
RNU4-4P-201ENST00000364588 MZB1Q8WU39 189 aa6.61□□□□□ -1.35
RNU4-4P-201ENST00000364588 TRIM55Q9BYV6 548 aa6.61□□□□□ -1.35
RNU4-4P-201ENST00000364588 PRKRIP1Q9H875 184 aaPredicted RBP6.61□□□□□ -1.35
RNU4-4P-201ENST00000364588 CNTD2Q9H8S5 307 aa6.61□□□□□ -1.35
RNU4-4P-201ENST00000364588 IFT57Q9NWB7 429 aa6.61□□□□□ -1.35
RNU4-4P-201ENST00000364588 CWC25Q9NXE8 425 aaPredicted RBP6.61□□□□□ -1.35
RNU4-4P-201ENST00000364588 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.61□□□□□ -1.35
RNU4-4P-201ENST00000364588 CLEC1BQ9P126 229 aa6.61□□□□□ -1.35
RNU4-4P-201ENST00000364588 DBR1Q9UK59 544 aaKnown RBP6.61□□□□□ -1.35
RNU4-4P-201ENST00000364588 SCAF8Q9UPN6 1271 aaKnown RBP6.61□□□□□ -1.35
RNU4-4P-201ENST00000364588 CPP00450 1065 aa6.6□□□□□ -1.35
RNU4-4P-201ENST00000364588 SCG5P05408 212 aa6.6□□□□□ -1.35
RNU4-4P-201ENST00000364588 SNRPB2P08579 225 aaKnown RBP6.6□□□□□ -1.35
RNU4-4P-201ENST00000364588 GLI4P10075 376 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms