RNA–Protein interactions for RNA: ENST00000350435.11

UBE2D3-205, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-205ENST00000350435 WTAPQ15007 396 aa10.49□□□□□ -0.73
UBE2D3-205ENST00000350435 CCDC96Q2M329 555 aa10.49□□□□□ -0.73
UBE2D3-205ENST00000350435 HEATR6Q6AI08 1181 aaKnown RBP10.49□□□□□ -0.73
UBE2D3-205ENST00000350435 ELMSAN1Q6PJG2 1045 aa10.49□□□□□ -0.73
UBE2D3-205ENST00000350435 LRRC55Q6ZSA7 311 aa10.49□□□□□ -0.73
UBE2D3-205ENST00000350435 SLC24A5Q71RS6 500 aa10.49□□□□□ -0.73
UBE2D3-205ENST00000350435 ABI1Q8IZP0 508 aa10.49□□□□□ -0.73
UBE2D3-205ENST00000350435 LSM14AQ8ND56 463 aaKnown RBP10.49□□□□□ -0.73
UBE2D3-205ENST00000350435 DEFB124Q8NES8 71 aa10.49□□□□□ -0.73
UBE2D3-205ENST00000350435 SPOCK2Q92563 424 aa10.49□□□□□ -0.73
UBE2D3-205ENST00000350435 FGF14Q92915 247 aa10.49□□□□□ -0.73
UBE2D3-205ENST00000350435 PHKBQ93100 1093 aa10.49□□□□□ -0.73
UBE2D3-205ENST00000350435 RMDN3Q96TC7 470 aa10.49□□□□□ -0.73
UBE2D3-205ENST00000350435 EMILIN2Q9BXX0 1053 aa10.49□□□□□ -0.73
UBE2D3-205ENST00000350435 TMEM117Q9H0C3 514 aa10.49□□□□□ -0.73
UBE2D3-205ENST00000350435 TMX1Q9H3N1 280 aa10.49□□□□□ -0.73
UBE2D3-205ENST00000350435 NDRG2Q9UN36 371 aaKnown RBP10.49□□□□□ -0.73
UBE2D3-205ENST00000350435 SRPK3Q9UPE1 567 aa10.49□□□□□ -0.73
UBE2D3-205ENST00000350435 MTMR7Q9Y216 660 aa10.49□□□□□ -0.73
UBE2D3-205ENST00000350435 RAXQ9Y2V3 346 aa10.49□□□□□ -0.73
UBE2D3-205ENST00000350435 PCDHGA5Q9Y5G8 931 aa10.49□□□□□ -0.73
UBE2D3-205ENST00000350435 ZFP37Q9Y6Q3 630 aaPredicted RBP10.49□□□□□ -0.73
UBE2D3-205ENST00000350435 ZBED9Q6R2W3 1325 aa10.49□□□□□ -0.73
UBE2D3-205ENST00000350435 PTPN13Q12923 2485 aa10.49□□□□□ -0.73
UBE2D3-205ENST00000350435 DOPEY1Q5JWR5 2465 aa10.49□□□□□ -0.73
UBE2D3-205ENST00000350435 COL12A1Q99715 3063 aa10.49□□□□□ -0.73
UBE2D3-205ENST00000350435 SHISA7A6NL88 538 aa10.48□□□□□ -0.73
UBE2D3-205ENST00000350435 CAPN9O14815 690 aa10.48□□□□□ -0.73
UBE2D3-205ENST00000350435 INPPL1O15357 1258 aa10.48□□□□□ -0.73
UBE2D3-205ENST00000350435 TSPY3P0CV98 308 aa10.48□□□□□ -0.73
UBE2D3-205ENST00000350435 TSPY8P0CW00 308 aa10.48□□□□□ -0.73
UBE2D3-205ENST00000350435 SLC16A2P36021 539 aa10.48□□□□□ -0.73
UBE2D3-205ENST00000350435 METAP2P50579 478 aaKnown RBP eCLIP10.48□□□□□ -0.73
UBE2D3-205ENST00000350435 CLCN4P51793 760 aa10.48□□□□□ -0.73
UBE2D3-205ENST00000350435 SATB1Q01826 763 aa10.48□□□□□ -0.73
UBE2D3-205ENST00000350435 SYDE2Q5VT97 1194 aa10.48□□□□□ -0.73
UBE2D3-205ENST00000350435 ARHGEF16Q5VV41 709 aa10.48□□□□□ -0.73
UBE2D3-205ENST00000350435 TCEAL6Q6IPX3 200 aa10.48□□□□□ -0.73
UBE2D3-205ENST00000350435 PARM1Q6UWI2 310 aa10.48□□□□□ -0.73
UBE2D3-205ENST00000350435 FAM43BQ6ZT52 329 aaPredicted RBP10.48□□□□□ -0.73
UBE2D3-205ENST00000350435 RGS22Q8NE09 1264 aa10.48□□□□□ -0.73
UBE2D3-205ENST00000350435 SMG7Q92540 1137 aaKnown RBP10.48□□□□□ -0.73
UBE2D3-205ENST00000350435 TCEAL3Q969E4 200 aa10.48□□□□□ -0.73
UBE2D3-205ENST00000350435 RHOBTB2Q9BYZ6 727 aa10.48□□□□□ -0.73
UBE2D3-205ENST00000350435 SLC32A1Q9H598 525 aa10.48□□□□□ -0.73
UBE2D3-205ENST00000350435 PIDD1Q9HB75 910 aa10.48□□□□□ -0.73
UBE2D3-205ENST00000350435 RGS18Q9NS28 235 aa10.48□□□□□ -0.73
UBE2D3-205ENST00000350435 TMEM161AQ9NX61 479 aa10.48□□□□□ -0.73
UBE2D3-205ENST00000350435 DPP7Q9UHL4 492 aa10.48□□□□□ -0.73
UBE2D3-205ENST00000350435 TUBE1Q9UJT0 475 aa10.48□□□□□ -0.73
UBE2D3-205ENST00000350435 TRPV2Q9Y5S1 764 aa10.48□□□□□ -0.73
UBE2D3-205ENST00000350435 IGSF9BQ9UPX0 1349 aa10.48□□□□□ -0.73
UBE2D3-205ENST00000350435 MTCL1Q9Y4B5 1905 aaKnown RBP10.47□□□□□ -0.73
UBE2D3-205ENST00000350435 MINDY4BA8MYZ0 360 aa10.47□□□□□ -0.73
UBE2D3-205ENST00000350435 HOXA2O43364 376 aa10.47□□□□□ -0.73
UBE2D3-205ENST00000350435 MGEA5O60502 916 aa10.47□□□□□ -0.73
UBE2D3-205ENST00000350435 PRDM1O75626 825 aa10.47□□□□□ -0.73
UBE2D3-205ENST00000350435 GNAI3P08754 354 aa10.47□□□□□ -0.73
UBE2D3-205ENST00000350435 EIF2AK2P19525 551 aaKnown RBP10.47□□□□□ -0.73
UBE2D3-205ENST00000350435 ALDH7A1P49419 539 aaKnown RBP10.47□□□□□ -0.73
UBE2D3-205ENST00000350435 POLGP54098 1239 aaPredicted RBP10.47□□□□□ -0.73
UBE2D3-205ENST00000350435 DIEXFQ68CQ4 756 aaKnown RBP10.47□□□□□ -0.73
UBE2D3-205ENST00000350435 MTSS1LQ765P7 747 aa10.47□□□□□ -0.73
UBE2D3-205ENST00000350435 CACNA2D4Q7Z3S7 1137 aa10.47□□□□□ -0.73
UBE2D3-205ENST00000350435 CASD1Q96PB1 797 aa10.47□□□□□ -0.73
UBE2D3-205ENST00000350435 ADAM2Q99965 735 aa10.47□□□□□ -0.73
UBE2D3-205ENST00000350435 MAN1C1Q9NR34 630 aa10.47□□□□□ -0.73
UBE2D3-205ENST00000350435 SALL2Q9Y467 1007 aaPredicted RBP10.47□□□□□ -0.73
UBE2D3-205ENST00000350435 C9IYK1 514 aa10.46□□□□□ -0.73
UBE2D3-205ENST00000350435 NT5C1B-RDH14C9J2C7 533 aa10.46□□□□□ -0.73
UBE2D3-205ENST00000350435 NR3C2P08235 984 aa10.46□□□□□ -0.73
UBE2D3-205ENST00000350435 UBA1P22314 1058 aaKnown RBP10.46□□□□□ -0.73
UBE2D3-205ENST00000350435 RAP1GAPP47736 663 aa10.46□□□□□ -0.73
UBE2D3-205ENST00000350435 TMEM266Q2M3C6 531 aa10.46□□□□□ -0.73
UBE2D3-205ENST00000350435 SBK1Q52WX2 424 aa10.46□□□□□ -0.73
UBE2D3-205ENST00000350435 PPP4R3BQ5MIZ7 849 aa10.46□□□□□ -0.73
UBE2D3-205ENST00000350435 TRIM50Q86XT4 487 aa10.46□□□□□ -0.73
UBE2D3-205ENST00000350435 CHCHD4Q8N4Q1 142 aa10.46□□□□□ -0.73
UBE2D3-205ENST00000350435 NEDD1Q8NHV4 660 aa10.46□□□□□ -0.73
UBE2D3-205ENST00000350435 CRELD1Q96HD1 420 aa10.46□□□□□ -0.73
UBE2D3-205ENST00000350435 MS4A3Q96HJ5 214 aa10.46□□□□□ -0.73
UBE2D3-205ENST00000350435 FAM49AQ9H0Q0 323 aaPredicted RBP10.46□□□□□ -0.73
UBE2D3-205ENST00000350435 ELAC1Q9H777 363 aaKnown RBP10.46□□□□□ -0.73
UBE2D3-205ENST00000350435 TMEM9BQ9NQ34 198 aa10.46□□□□□ -0.73
UBE2D3-205ENST00000350435 KCNK4Q9NYG8 393 aa10.46□□□□□ -0.73
UBE2D3-205ENST00000350435 PLIN4Q96Q06 1357 aa10.46□□□□□ -0.74
UBE2D3-205ENST00000350435 PCNX2A6NKB5 2137 aa10.46□□□□□ -0.74
UBE2D3-205ENST00000350435 URB1O60287 2271 aaKnown RBP10.45□□□□□ -0.74
UBE2D3-205ENST00000350435 MYH6P13533 1939 aa10.45□□□□□ -0.74
UBE2D3-205ENST00000350435 WDR19Q8NEZ3 1342 aa10.45□□□□□ -0.74
UBE2D3-205ENST00000350435 ENO4A6NNW6 628 aa10.45□□□□□ -0.74
UBE2D3-205ENST00000350435 MAN2B1O00754 1011 aa10.45□□□□□ -0.74
UBE2D3-205ENST00000350435 TGFB3P10600 412 aa10.45□□□□□ -0.74
UBE2D3-205ENST00000350435 SP2Q02086 613 aa10.45□□□□□ -0.74
UBE2D3-205ENST00000350435 TMEM62Q0P6H9 643 aa10.45□□□□□ -0.74
UBE2D3-205ENST00000350435 PPFIA1Q13136 1202 aa10.45□□□□□ -0.74
UBE2D3-205ENST00000350435 GSE1Q14687 1217 aa10.45□□□□□ -0.74
UBE2D3-205ENST00000350435 USH1GQ495M9 461 aa10.45□□□□□ -0.74
UBE2D3-205ENST00000350435 UTP14CQ5TAP6 766 aaKnown RBP10.45□□□□□ -0.74
UBE2D3-205ENST00000350435 TTBK2Q6IQ55 1244 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms