RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 WDR93Q6P2C0 686 aa15.55■□□□□ 0.08
VRK3-201ENST00000316763 B3GNT9Q6UX72 402 aa15.55■□□□□ 0.08
VRK3-201ENST00000316763 NELFCDQ8IXH7 590 aa15.55■□□□□ 0.08
VRK3-201ENST00000316763 KCTD17Q8N5Z5 321 aa15.55■□□□□ 0.08
VRK3-201ENST00000316763 ZFP91Q96JP5 570 aaPredicted RBP15.55■□□□□ 0.08
VRK3-201ENST00000316763 RIT2Q99578 217 aa15.55■□□□□ 0.08
VRK3-201ENST00000316763 ZNF577Q9BSK1 485 aa15.55■□□□□ 0.08
VRK3-201ENST00000316763 WDR11Q9BZH6 1224 aa15.55■□□□□ 0.08
VRK3-201ENST00000316763 ZHX3Q9H4I2 956 aa15.55■□□□□ 0.08
VRK3-201ENST00000316763 NPHP3-ACAD11A0A0J9YXS1 232 aa15.55■□□□□ 0.08
VRK3-201ENST00000316763 POTEFA5A3E0 1075 aa15.55■□□□□ 0.08
VRK3-201ENST00000316763 TFRCP02786 760 aaKnown RBP15.55■□□□□ 0.08
VRK3-201ENST00000316763 NR3C2P08235 984 aa15.55■□□□□ 0.08
VRK3-201ENST00000316763 OAS2P29728 719 aaKnown RBP15.55■□□□□ 0.08
VRK3-201ENST00000316763 ADAM9Q13443 819 aa15.55■□□□□ 0.08
VRK3-201ENST00000316763 SFMBT2Q5VUG0 894 aa15.55■□□□□ 0.08
VRK3-201ENST00000316763 POTEGQ6S5H5 508 aa15.55■□□□□ 0.08
VRK3-201ENST00000316763 CATSPER3Q86XQ3 398 aa15.55■□□□□ 0.08
VRK3-201ENST00000316763 SYT2Q8N9I0 419 aaPredicted RBP15.55■□□□□ 0.08
VRK3-201ENST00000316763 NOA1Q8NC60 698 aaKnown RBP15.55■□□□□ 0.08
VRK3-201ENST00000316763 DNERQ8NFT8 737 aa15.55■□□□□ 0.08
VRK3-201ENST00000316763 SCFD1Q8WVM8 642 aa15.55■□□□□ 0.08
VRK3-201ENST00000316763 KCTD10Q9H3F6 313 aa15.55■□□□□ 0.08
VRK3-201ENST00000316763 ABCB6Q9NP58 842 aa15.55■□□□□ 0.08
VRK3-201ENST00000316763 ZNF263O14978 683 aa15.54■□□□□ 0.08
VRK3-201ENST00000316763 SPATA31C1P0DKV0 1188 aa15.54■□□□□ 0.08
VRK3-201ENST00000316763 ERCC3P19447 782 aa15.54■□□□□ 0.08
VRK3-201ENST00000316763 CCND2P30279 289 aa15.54■□□□□ 0.08
VRK3-201ENST00000316763 MAGEA1P43355 309 aa15.54■□□□□ 0.08
VRK3-201ENST00000316763 VSNL1P62760 191 aa15.54■□□□□ 0.08
VRK3-201ENST00000316763 KCNMA1Q12791 1236 aa15.54■□□□□ 0.08
VRK3-201ENST00000316763 FAM110CQ1W6H9 321 aa15.54■□□□□ 0.08
VRK3-201ENST00000316763 MAP9Q49MG5 647 aa15.54■□□□□ 0.08
VRK3-201ENST00000316763 SLC9C1Q4G0N8 1177 aa15.54■□□□□ 0.08
VRK3-201ENST00000316763 ARSHQ5FYA8 562 aa15.54■□□□□ 0.08
VRK3-201ENST00000316763 CCDC70Q6NSX1 233 aa15.54■□□□□ 0.08
VRK3-201ENST00000316763 TRIM59Q8IWR1 403 aa15.54■□□□□ 0.08
VRK3-201ENST00000316763 ZC3H3Q8IXZ2 948 aaKnown RBP15.54■□□□□ 0.08
VRK3-201ENST00000316763 ANKRD35Q8N283 1001 aa15.54■□□□□ 0.08
VRK3-201ENST00000316763 LSM14BQ9BX40 385 aaKnown RBP15.54■□□□□ 0.08
VRK3-201ENST00000316763 ACBD3Q9H3P7 528 aa15.54■□□□□ 0.08
VRK3-201ENST00000316763 AGO4Q9HCK5 861 aaKnown RBP15.54■□□□□ 0.08
VRK3-201ENST00000316763 L1RE1Q9UN81 338 aa15.54■□□□□ 0.08
VRK3-201ENST00000316763 TARSL2A2RTX5 802 aaKnown RBP15.53■□□□□ 0.08
VRK3-201ENST00000316763 EML1O00423 815 aa15.53■□□□□ 0.08
VRK3-201ENST00000316763 POLR3GO15318 223 aaPredicted RBP15.53■□□□□ 0.08
VRK3-201ENST00000316763 DHX15O43143 795 aaKnown RBP15.53■□□□□ 0.08
VRK3-201ENST00000316763 PJA2O43164 708 aa15.53■□□□□ 0.08
VRK3-201ENST00000316763 GAS7O60861 476 aa15.53■□□□□ 0.08
VRK3-201ENST00000316763 SERPING1P05155 500 aa15.53■□□□□ 0.08
VRK3-201ENST00000316763 CACNB1Q02641 598 aaPredicted RBP15.53■□□□□ 0.08
VRK3-201ENST00000316763 MTMR1Q13613 665 aa15.53■□□□□ 0.08
VRK3-201ENST00000316763 GIT2Q14161 759 aa15.53■□□□□ 0.08
VRK3-201ENST00000316763 NCAPG2Q86XI2 1143 aa15.53■□□□□ 0.08
VRK3-201ENST00000316763 CAPZA3Q96KX2 299 aa15.53■□□□□ 0.08
VRK3-201ENST00000316763 INPP4AQ96PE3 977 aaPredicted RBP15.53■□□□□ 0.08
VRK3-201ENST00000316763 IWS1Q96ST2 819 aa15.53■□□□□ 0.08
VRK3-201ENST00000316763 MMS19Q96T76 1030 aa15.53■□□□□ 0.08
VRK3-201ENST00000316763 POLR3CQ9BUI4 534 aaPredicted RBP15.53■□□□□ 0.08
VRK3-201ENST00000316763 CFHR5Q9BXR6 569 aa15.53■□□□□ 0.08
VRK3-201ENST00000316763 PORCNQ9H237 461 aa15.53■□□□□ 0.08
VRK3-201ENST00000316763 DUSP10Q9Y6W6 482 aa15.53■□□□□ 0.08
VRK3-201ENST00000316763 ZNFX1Q9P2E3 1918 aaKnown RBP15.53■□□□□ 0.08
VRK3-201ENST00000316763 CEP350Q5VT06 3117 aa15.53■□□□□ 0.08
VRK3-201ENST00000316763 ASTN1O14525 1302 aa15.53■□□□□ 0.08
VRK3-201ENST00000316763 CALUO43852 315 aaPredicted RBP15.53■□□□□ 0.08
VRK3-201ENST00000316763 SRGAP2O75044 1071 aa15.53■□□□□ 0.08
VRK3-201ENST00000316763 STAM2O75886 525 aa15.53■□□□□ 0.08
VRK3-201ENST00000316763 MYCLP12524 364 aaPredicted RBP15.53■□□□□ 0.08
VRK3-201ENST00000316763 PRLRP16471 622 aa15.53■□□□□ 0.08
VRK3-201ENST00000316763 MAP2K1Q02750 393 aaPredicted RBP15.53■□□□□ 0.08
VRK3-201ENST00000316763 RAD51AP2Q09MP3 1159 aa15.53■□□□□ 0.08
VRK3-201ENST00000316763 TDRD12Q587J7 1177 aaKnown RBP15.53■□□□□ 0.08
VRK3-201ENST00000316763 SHCBP1Q8NEM2 672 aa15.53■□□□□ 0.08
VRK3-201ENST00000316763 HSD17B14Q9BPX1 270 aa15.53■□□□□ 0.08
VRK3-201ENST00000316763 FGFBP2Q9BYJ0 223 aa15.53■□□□□ 0.08
VRK3-201ENST00000316763 MAFGO15525 162 aa15.52■□□□□ 0.07
VRK3-201ENST00000316763 CCNA1P78396 465 aa15.52■□□□□ 0.07
VRK3-201ENST00000316763 CNTN2Q02246 1040 aa15.52■□□□□ 0.07
VRK3-201ENST00000316763 FRMD5Q7Z6J6 570 aa15.52■□□□□ 0.07
VRK3-201ENST00000316763 RNF10Q8N5U6 811 aaKnown RBP15.52■□□□□ 0.07
VRK3-201ENST00000316763 GPRASP2Q96D09 838 aa15.52■□□□□ 0.07
VRK3-201ENST00000316763 EIF2AK1Q9BQI3 630 aaKnown RBP15.52■□□□□ 0.07
VRK3-201ENST00000316763 TEKT3Q9BXF9 490 aa15.52■□□□□ 0.07
VRK3-201ENST00000316763 MROH8Q9H579 483 aa15.52■□□□□ 0.07
VRK3-201ENST00000316763 EFCC1Q9HA90 598 aa15.52■□□□□ 0.07
VRK3-201ENST00000316763 NLRC4Q9NPP4 1024 aa15.52■□□□□ 0.07
VRK3-201ENST00000316763 ZHX1Q9UKY1 873 aaPredicted RBP15.52■□□□□ 0.07
VRK3-201ENST00000316763 SNX12Q9UMY4 172 aa15.52■□□□□ 0.07
VRK3-201ENST00000316763 MYH10P35580 1976 aa15.52■□□□□ 0.07
VRK3-201ENST00000316763 DOCK3Q8IZD9 2030 aa15.51■□□□□ 0.07
VRK3-201ENST00000316763 RGS20O76081 388 aa15.51■□□□□ 0.07
VRK3-201ENST00000316763 POLR2FP61218 127 aaKnown RBP15.51■□□□□ 0.07
VRK3-201ENST00000316763 ITGB3BPQ13352 177 aaPredicted RBP15.51■□□□□ 0.07
VRK3-201ENST00000316763 KNOP1Q1ED39 458 aaKnown RBP15.51■□□□□ 0.07
VRK3-201ENST00000316763 ASTE1Q2TB18 679 aaPredicted RBP15.51■□□□□ 0.07
VRK3-201ENST00000316763 CCDC155Q8N6L0 562 aa15.51■□□□□ 0.07
VRK3-201ENST00000316763 FAM133AQ8N9E0 248 aa15.51■□□□□ 0.07
VRK3-201ENST00000316763 UNC45AQ9H3U1 944 aa15.51■□□□□ 0.07
VRK3-201ENST00000316763 TRAF3IP3Q9Y228 551 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms