RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 EXOC3O60645 756 aa21.8■■□□□ 1.08
CXCL16-201ENST00000293778 ZBED4O75132 1171 aa21.8■■□□□ 1.08
CXCL16-201ENST00000293778 STAT1P42224 750 aa21.8■■□□□ 1.08
CXCL16-201ENST00000293778 RUBCNQ92622 972 aa21.8■■□□□ 1.08
CXCL16-201ENST00000293778 RPAP3Q9H6T3 665 aaPredicted RBP21.8■■□□□ 1.08
CXCL16-201ENST00000293778 VIPAS39Q9H9C1 493 aa21.8■■□□□ 1.08
CXCL16-201ENST00000293778 NFKBIEO00221 500 aa21.8■■□□□ 1.08
CXCL16-201ENST00000293778 RARRES1P49788 294 aa21.8■■□□□ 1.08
CXCL16-201ENST00000293778 PGM5Q15124 567 aa21.8■■□□□ 1.08
CXCL16-201ENST00000293778 GFPT2O94808 682 aa21.79■■□□□ 1.08
CXCL16-201ENST00000293778 LYPLA2O95372 231 aa21.79■■□□□ 1.08
CXCL16-201ENST00000293778 TRIM49P0CI25 452 aa21.79■■□□□ 1.08
CXCL16-201ENST00000293778 TRIM49CP0CI26 452 aa21.79■■□□□ 1.08
CXCL16-201ENST00000293778 MYBL2P10244 700 aa21.79■■□□□ 1.08
CXCL16-201ENST00000293778 MAPTP10636 758 aaKnown RBP21.79■■□□□ 1.08
CXCL16-201ENST00000293778 MYCLP12524 364 aaPredicted RBP21.79■■□□□ 1.08
CXCL16-201ENST00000293778 ALCAMQ13740 583 aa21.79■■□□□ 1.08
CXCL16-201ENST00000293778 MYBPC2Q14324 1141 aa21.79■■□□□ 1.08
CXCL16-201ENST00000293778 CBWD6Q4V339 395 aa21.79■■□□□ 1.08
CXCL16-201ENST00000293778 CBWD3Q5JTY5 395 aa21.79■■□□□ 1.08
CXCL16-201ENST00000293778 CBWD5Q5RIA9 395 aa21.79■■□□□ 1.08
CXCL16-201ENST00000293778 MS4A14Q96JA4 679 aa21.79■■□□□ 1.08
CXCL16-201ENST00000293778 PNMA2Q9UL42 364 aa21.79■■□□□ 1.08
CXCL16-201ENST00000293778 ASTN2O75129 1339 aaPredicted RBP21.79■■□□□ 1.08
CXCL16-201ENST00000293778 DNA2P51530 1060 aa21.79■■□□□ 1.08
CXCL16-201ENST00000293778 SAMD7Q7Z3H4 446 aa21.79■■□□□ 1.08
CXCL16-201ENST00000293778 MICALL2Q8IY33 904 aa21.79■■□□□ 1.08
CXCL16-201ENST00000293778 GSPT2Q8IYD1 628 aaKnown RBP21.79■■□□□ 1.08
CXCL16-201ENST00000293778 TRERF1Q96PN7 1200 aa21.79■■□□□ 1.08
CXCL16-201ENST00000293778 NENFQ9UMX5 172 aa21.79■■□□□ 1.08
CXCL16-201ENST00000293778 N4BP1O75113 896 aaKnown RBP21.78■■□□□ 1.08
CXCL16-201ENST00000293778 CYP2C19P33261 490 aa21.78■■□□□ 1.08
CXCL16-201ENST00000293778 MYL7Q01449 175 aa21.78■■□□□ 1.08
CXCL16-201ENST00000293778 BFSP1Q12934 665 aa21.78■■□□□ 1.08
CXCL16-201ENST00000293778 SPP2Q13103 211 aa21.78■■□□□ 1.08
CXCL16-201ENST00000293778 IFI16Q16666 785 aaKnown RBP21.78■■□□□ 1.08
CXCL16-201ENST00000293778 TBC1D10BQ4KMP7 808 aaPredicted RBP21.78■■□□□ 1.08
CXCL16-201ENST00000293778 HDAC7Q8WUI4 952 aa21.78■■□□□ 1.08
CXCL16-201ENST00000293778 CCDC102AQ96A19 550 aa21.78■■□□□ 1.08
CXCL16-201ENST00000293778 ZBTB9Q96C00 473 aa21.78■■□□□ 1.08
CXCL16-201ENST00000293778 CCDC43Q96MW1 224 aaKnown RBP21.78■■□□□ 1.08
CXCL16-201ENST00000293778 RMDN3Q96TC7 470 aa21.78■■□□□ 1.08
CXCL16-201ENST00000293778 STK33Q9BYT3 514 aa21.78■■□□□ 1.08
CXCL16-201ENST00000293778 INTS2Q9H0H0 1204 aaKnown RBP21.78■■□□□ 1.08
CXCL16-201ENST00000293778 TMEM206Q9H813 350 aa21.78■■□□□ 1.08
CXCL16-201ENST00000293778 RBM12Q9NTZ6 932 aaKnown RBP21.78■■□□□ 1.08
CXCL16-201ENST00000293778 HACL1Q9UJ83 578 aa21.78■■□□□ 1.08
CXCL16-201ENST00000293778 DNAJC12Q9UKB3 198 aa21.78■■□□□ 1.08
CXCL16-201ENST00000293778 F8VZ95 297 aa21.78■■□□□ 1.08
CXCL16-201ENST00000293778 ZBTB7AO95365 584 aa21.78■■□□□ 1.08
CXCL16-201ENST00000293778 SOX5P35711 763 aa21.78■■□□□ 1.08
CXCL16-201ENST00000293778 GMPSP49915 693 aaPredicted RBP21.78■■□□□ 1.08
CXCL16-201ENST00000293778 HSP90B2PQ58FF3 399 aa21.78■■□□□ 1.08
CXCL16-201ENST00000293778 RNF207Q6ZRF8 634 aa21.78■■□□□ 1.08
CXCL16-201ENST00000293778 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.78■■□□□ 1.08
CXCL16-201ENST00000293778 DMGDHQ9UI17 866 aaKnown RBP21.78■■□□□ 1.08
CXCL16-201ENST00000293778 PACSIN2Q9UNF0 486 aaPredicted RBP21.78■■□□□ 1.08
CXCL16-201ENST00000293778 ATP8B3O60423 1300 aa21.78■■□□□ 1.08
CXCL16-201ENST00000293778 EVI5O60447 810 aa21.77■■□□□ 1.08
CXCL16-201ENST00000293778 PLS3P13797 630 aa21.77■■□□□ 1.08
CXCL16-201ENST00000293778 YWHABP31946 246 aaKnown RBP21.77■■□□□ 1.08
CXCL16-201ENST00000293778 NBPF12Q5TAG4 269 aaPredicted RBP21.77■■□□□ 1.08
CXCL16-201ENST00000293778 NSMFQ6X4W1 530 aa21.77■■□□□ 1.08
CXCL16-201ENST00000293778 RDH13Q8NBN7 331 aa21.77■■□□□ 1.08
CXCL16-201ENST00000293778 ACCSQ96QU6 501 aa21.77■■□□□ 1.08
CXCL16-201ENST00000293778 PDCD2LQ9BRP1 358 aa21.77■■□□□ 1.08
CXCL16-201ENST00000293778 SELENOOQ9BVL4 669 aa21.77■■□□□ 1.08
CXCL16-201ENST00000293778 PXMP2Q9NR77 195 aa21.77■■□□□ 1.08
CXCL16-201ENST00000293778 A0A0U1RQG5 324 aaPredicted RBP21.76■■□□□ 1.07
CXCL16-201ENST00000293778 DDX3XO00571 662 aaKnown RBP eCLIP21.76■■□□□ 1.079e-8■■■■■ 44.9
CXCL16-201ENST00000293778 H2AFZP0C0S5 128 aa21.76■■□□□ 1.07
CXCL16-201ENST00000293778 FDX1P10109 184 aa21.76■■□□□ 1.07
CXCL16-201ENST00000293778 KRT13P13646 458 aa21.76■■□□□ 1.07
CXCL16-201ENST00000293778 NOP2P46087 812 aaKnown RBP21.76■■□□□ 1.07
CXCL16-201ENST00000293778 GYS2P54840 703 aa21.76■■□□□ 1.07
CXCL16-201ENST00000293778 DRAP1Q14919 205 aaPredicted RBP21.76■■□□□ 1.07
CXCL16-201ENST00000293778 H2AFVQ71UI9 128 aa21.76■■□□□ 1.07
CXCL16-201ENST00000293778 DNAAF5Q86Y56 855 aa21.76■■□□□ 1.07
CXCL16-201ENST00000293778 HINFPQ9BQA5 517 aa21.76■■□□□ 1.07
CXCL16-201ENST00000293778 HPCAL4Q9UM19 191 aa21.76■■□□□ 1.07
CXCL16-201ENST00000293778 VWA5AO00534 786 aa21.76■■□□□ 1.07
CXCL16-201ENST00000293778 UGCGQ16739 394 aa21.76■■□□□ 1.07
CXCL16-201ENST00000293778 ARHGEF16Q5VV41 709 aa21.76■■□□□ 1.07
CXCL16-201ENST00000293778 C8orf74Q6P047 294 aa21.76■■□□□ 1.07
CXCL16-201ENST00000293778 C4orf19Q8IY42 314 aa21.76■■□□□ 1.07
CXCL16-201ENST00000293778 FAM71BQ8TC56 605 aa21.76■■□□□ 1.07
CXCL16-201ENST00000293778 U2AF1L4Q8WU68 220 aaKnown RBP21.76■■□□□ 1.07
CXCL16-201ENST00000293778 ATG4CQ96DT6 458 aa21.76■■□□□ 1.07
CXCL16-201ENST00000293778 GDAP1L1Q96MZ0 367 aa21.76■■□□□ 1.07
CXCL16-201ENST00000293778 MED4Q9NPJ6 270 aa21.76■■□□□ 1.07
CXCL16-201ENST00000293778 STIM2Q9P246 746 aa21.76■■□□□ 1.07
CXCL16-201ENST00000293778 VPS18Q9P253 973 aa21.76■■□□□ 1.07
CXCL16-201ENST00000293778 APEX2Q9UBZ4 518 aa21.76■■□□□ 1.07
CXCL16-201ENST00000293778 TCEAL9Q9UHQ7 104 aa21.76■■□□□ 1.07
CXCL16-201ENST00000293778 ATP9AO75110 1047 aa21.75■■□□□ 1.07
CXCL16-201ENST00000293778 JAK3P52333 1124 aa21.75■■□□□ 1.07
CXCL16-201ENST00000293778 MRPS25P82663 173 aaKnown RBP21.75■■□□□ 1.07
CXCL16-201ENST00000293778 SLC7A5Q01650 507 aa21.75■■□□□ 1.07
CXCL16-201ENST00000293778 AENQ8WTP8 325 aaKnown RBP21.75■■□□□ 1.07
CXCL16-201ENST00000293778 TAF4BQ92750 862 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms