RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 PRDM5Q9NQX1 630 aaPredicted RBP18.53■□□□□ 0.56
SHANK1-201ENST00000293441 USH1CQ9Y6N9 552 aa18.53■□□□□ 0.56
SHANK1-201ENST00000293441 PHLPP2Q6ZVD8 1323 aa18.52■□□□□ 0.56
SHANK1-201ENST00000293441 EVI5O60447 810 aa18.52■□□□□ 0.56
SHANK1-201ENST00000293441 PDE1CQ14123 709 aaPredicted RBP18.52■□□□□ 0.56
SHANK1-201ENST00000293441 GBP5Q96PP8 586 aa18.52■□□□□ 0.56
SHANK1-201ENST00000293441 PANX2Q96RD6 677 aa18.52■□□□□ 0.56
SHANK1-201ENST00000293441 CLTCL1P53675 1640 aa18.52■□□□□ 0.56
SHANK1-201ENST00000293441 ATP1A3P13637 1013 aa18.52■□□□□ 0.56
SHANK1-201ENST00000293441 NFKBIAP25963 317 aa18.52■□□□□ 0.56
SHANK1-201ENST00000293441 HMGCS2P54868 508 aa18.52■□□□□ 0.56
SHANK1-201ENST00000293441 YWHAHQ04917 246 aaPredicted RBP18.52■□□□□ 0.56
SHANK1-201ENST00000293441 LXNQ9BS40 222 aa18.52■□□□□ 0.56
SHANK1-201ENST00000293441 GCOM2Q9BZD3 368 aaPredicted RBP18.52■□□□□ 0.56
SHANK1-201ENST00000293441 HEY1Q9Y5J3 304 aa18.52■□□□□ 0.56
SHANK1-201ENST00000293441 ZNF521Q96K83 1311 aa18.52■□□□□ 0.56
SHANK1-201ENST00000293441 IPO5O00410 1097 aaKnown RBP18.52■□□□□ 0.56
SHANK1-201ENST00000293441 FOXD4Q12950 439 aaPredicted RBP18.52■□□□□ 0.56
SHANK1-201ENST00000293441 FASTKD5Q7L8L6 764 aaKnown RBP18.52■□□□□ 0.56
SHANK1-201ENST00000293441 FAM84BQ96KN1 310 aaPredicted RBP18.52■□□□□ 0.56
SHANK1-201ENST00000293441 ALKQ9UM73 1620 aa18.52■□□□□ 0.56
SHANK1-201ENST00000293441 M0QYV0 167 aa18.52■□□□□ 0.55
SHANK1-201ENST00000293441 PAMP19021 973 aa18.52■□□□□ 0.55
SHANK1-201ENST00000293441 MTMR2Q13614 643 aa18.52■□□□□ 0.55
SHANK1-201ENST00000293441 CENPUQ71F23 418 aa18.52■□□□□ 0.55
SHANK1-201ENST00000293441 NRKQ7Z2Y5 1582 aa18.52■□□□□ 0.55
SHANK1-201ENST00000293441 RHOT2Q8IXI1 618 aa18.52■□□□□ 0.55
SHANK1-201ENST00000293441 CCDC197Q8NCU1 140 aa18.52■□□□□ 0.55
SHANK1-201ENST00000293441 ISCA1Q9BUE6 129 aa18.52■□□□□ 0.55
SHANK1-201ENST00000293441 MRPL4Q9BYD3 311 aaKnown RBP18.52■□□□□ 0.55
SHANK1-201ENST00000293441 BARHL2Q9NY43 387 aa18.52■□□□□ 0.55
SHANK1-201ENST00000293441 A2ML1A8K2U0 1454 aa18.52■□□□□ 0.55
SHANK1-201ENST00000293441 FOXO4P98177 505 aa18.52■□□□□ 0.55
SHANK1-201ENST00000293441 RAET1EQ8TD07 263 aa18.52■□□□□ 0.55
SHANK1-201ENST00000293441 FSD1LQ9BXM9 530 aa18.52■□□□□ 0.55
SHANK1-201ENST00000293441 IQCA1LA6NCM1 817 aa18.51■□□□□ 0.55
SHANK1-201ENST00000293441 VAMP7P51809 220 aa18.51■□□□□ 0.55
SHANK1-201ENST00000293441 SAAL1Q96ER3 474 aa18.51■□□□□ 0.55
SHANK1-201ENST00000293441 ASNSD1Q9NWL6 643 aa18.51■□□□□ 0.55
SHANK1-201ENST00000293441 F5H423 210 aaPredicted RBP18.51■□□□□ 0.55
SHANK1-201ENST00000293441 CDC27P30260 824 aa18.51■□□□□ 0.55
SHANK1-201ENST00000293441 TMEM35BQ8NCS4 154 aa18.51■□□□□ 0.55
SHANK1-201ENST00000293441 DHX38Q92620 1227 aaKnown RBP18.51■□□□□ 0.55
SHANK1-201ENST00000293441 PPWD1Q96BP3 646 aaKnown RBP18.51■□□□□ 0.55
SHANK1-201ENST00000293441 HEMGNQ9BXL5 484 aa18.51■□□□□ 0.55
SHANK1-201ENST00000293441 EPS15L1Q9UBC2 864 aa18.51■□□□□ 0.55
SHANK1-201ENST00000293441 LAMC1P11047 1609 aa18.51■□□□□ 0.55
SHANK1-201ENST00000293441 AKR1B1P15121 316 aa18.51■□□□□ 0.55
SHANK1-201ENST00000293441 NCF2P19878 526 aaPredicted RBP18.51■□□□□ 0.55
SHANK1-201ENST00000293441 PRCPP42785 496 aa18.51■□□□□ 0.55
SHANK1-201ENST00000293441 MICALL2Q8IY33 904 aa18.51■□□□□ 0.55
SHANK1-201ENST00000293441 CCT5P48643 541 aa18.51■□□□□ 0.55
SHANK1-201ENST00000293441 TMED8Q6PL24 325 aaPredicted RBP18.51■□□□□ 0.55
SHANK1-201ENST00000293441 FRA10AC1Q70Z53 315 aa18.51■□□□□ 0.55
SHANK1-201ENST00000293441 OR6J1Q8NGC5 347 aa18.51■□□□□ 0.55
SHANK1-201ENST00000293441 FAN1Q9Y2M0 1017 aa18.51■□□□□ 0.55
SHANK1-201ENST00000293441 ADORA2BP29275 332 aa18.5■□□□□ 0.55
SHANK1-201ENST00000293441 SSTR3P32745 418 aaPredicted RBP18.5■□□□□ 0.55
SHANK1-201ENST00000293441 LRRC31Q6UY01 552 aa18.5■□□□□ 0.55
SHANK1-201ENST00000293441 SCYL3Q8IZE3 742 aa18.5■□□□□ 0.55
SHANK1-201ENST00000293441 FMO2Q99518 471 aa18.5■□□□□ 0.55
SHANK1-201ENST00000293441 KLC2Q9H0B6 622 aa18.5■□□□□ 0.55
SHANK1-201ENST00000293441 FAM217BQ9NTX9 383 aaPredicted RBP18.5■□□□□ 0.55
SHANK1-201ENST00000293441 NEMP1O14524 444 aa18.5■□□□□ 0.55
SHANK1-201ENST00000293441 FGGP02679 453 aa18.5■□□□□ 0.55
SHANK1-201ENST00000293441 EIF2AK1Q9BQI3 630 aaKnown RBP18.5■□□□□ 0.55
SHANK1-201ENST00000293441 QRICH2Q9H0J4 1663 aa18.5■□□□□ 0.55
SHANK1-201ENST00000293441 GSG1L2A8MUP6 293 aa18.5■□□□□ 0.55
SHANK1-201ENST00000293441 TTI1O43156 1089 aa18.5■□□□□ 0.55
SHANK1-201ENST00000293441 NME3Q13232 169 aa18.5■□□□□ 0.55
SHANK1-201ENST00000293441 SLC10A5Q5PT55 438 aa18.5■□□□□ 0.55
SHANK1-201ENST00000293441 SKIV2LQ15477 1246 aaKnown RBP18.5■□□□□ 0.55
SHANK1-201ENST00000293441 KIAA1755Q5JYT7 1200 aa18.5■□□□□ 0.55
SHANK1-201ENST00000293441 TOGARAM2Q6ZUX3 1019 aa18.5■□□□□ 0.55
SHANK1-201ENST00000293441 NEK9Q8TD19 979 aa18.5■□□□□ 0.55
SHANK1-201ENST00000293441 CEP72Q9P209 647 aa18.5■□□□□ 0.55
SHANK1-201ENST00000293441 RNF14Q9UBS8 474 aa18.5■□□□□ 0.55
SHANK1-201ENST00000293441 PALMO75781 387 aa18.5■□□□□ 0.55
SHANK1-201ENST00000293441 PSMC5P62195 406 aa18.5■□□□□ 0.55
SHANK1-201ENST00000293441 KNOP1Q1ED39 458 aaKnown RBP18.5■□□□□ 0.55
SHANK1-201ENST00000293441 PDIK1LQ8N165 341 aa18.5■□□□□ 0.55
SHANK1-201ENST00000293441 SPHKAPQ2M3C7 1700 aa18.5■□□□□ 0.55
SHANK1-201ENST00000293441 ACSL3O95573 720 aa18.49■□□□□ 0.55
SHANK1-201ENST00000293441 ZMYND12Q9H0C1 365 aa18.49■□□□□ 0.55
SHANK1-201ENST00000293441 TNPO2O14787 897 aaKnown RBP18.49■□□□□ 0.55
SHANK1-201ENST00000293441 MFAP3LO75121 409 aa18.49■□□□□ 0.55
SHANK1-201ENST00000293441 SPATS2Q86XZ4 545 aaKnown RBP18.49■□□□□ 0.55
SHANK1-201ENST00000293441 HERC5Q9UII4 1024 aaKnown RBP18.49■□□□□ 0.55
SHANK1-201ENST00000293441 TDP2O95551 362 aa18.49■□□□□ 0.55
SHANK1-201ENST00000293441 LIG3P49916 1009 aa18.49■□□□□ 0.55
SHANK1-201ENST00000293441 KCNH2Q12809 1159 aa18.49■□□□□ 0.55
SHANK1-201ENST00000293441 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.49■□□□□ 0.55
SHANK1-201ENST00000293441 DONSONQ9NYP3 566 aa18.49■□□□□ 0.55
SHANK1-201ENST00000293441 SMIM24O75264 130 aa18.49■□□□□ 0.55
SHANK1-201ENST00000293441 PRR29P0C7W0 189 aa18.49■□□□□ 0.55
SHANK1-201ENST00000293441 SPATA17Q96L03 361 aa18.49■□□□□ 0.55
SHANK1-201ENST00000293441 CNOT7Q9UIV1 285 aaKnown RBP18.49■□□□□ 0.55
SHANK1-201ENST00000293441 IQANK1A0A1B0GTG1 560 aa18.49■□□□□ 0.55
SHANK1-201ENST00000293441 R3HDM1Q15032 1099 aaKnown RBP18.49■□□□□ 0.55
SHANK1-201ENST00000293441 MB21D2Q8IYB1 491 aaPredicted RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms