RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 HEATR3Q7Z4Q2 680 aa14.2□□□□□ -0.14
NUP54-201ENST00000264883 KIAA0895Q8NCT3 520 aa14.2□□□□□ -0.14
NUP54-201ENST00000264883 RASGRP4Q8TDF6 673 aa14.2□□□□□ -0.14
NUP54-201ENST00000264883 ZNF384Q8TF68 577 aa14.2□□□□□ -0.14
NUP54-201ENST00000264883 PLIN2Q99541 437 aa14.2□□□□□ -0.14
NUP54-201ENST00000264883 SPZ1Q9BXG8 430 aa14.2□□□□□ -0.14
NUP54-201ENST00000264883 DPH5Q9H2P9 285 aa14.2□□□□□ -0.14
NUP54-201ENST00000264883 C6orf50Q9HD87 102 aa14.2□□□□□ -0.14
NUP54-201ENST00000264883 PNMA3Q9UL41 463 aa14.2□□□□□ -0.14
NUP54-201ENST00000264883 CCDC169A6NNP5 214 aa14.2□□□□□ -0.14
NUP54-201ENST00000264883 E7ENQ6 273 aa14.2□□□□□ -0.14
NUP54-201ENST00000264883 KRIT1O00522 736 aa14.2□□□□□ -0.14
NUP54-201ENST00000264883 RGS16O15492 202 aaPredicted RBP14.2□□□□□ -0.14
NUP54-201ENST00000264883 SERPING1P05155 500 aa14.2□□□□□ -0.14
NUP54-201ENST00000264883 POLE2P56282 527 aa14.2□□□□□ -0.14
NUP54-201ENST00000264883 MECOMQ03112 1051 aa14.2□□□□□ -0.14
NUP54-201ENST00000264883 SPTY2D1Q68D10 685 aaPredicted RBP14.2□□□□□ -0.14
NUP54-201ENST00000264883 APBB1IPQ7Z5R6 666 aaPredicted RBP14.2□□□□□ -0.14
NUP54-201ENST00000264883 NEK8Q86SG6 692 aa14.2□□□□□ -0.14
NUP54-201ENST00000264883 FAM84BQ96KN1 310 aaPredicted RBP14.2□□□□□ -0.14
NUP54-201ENST00000264883 RAB3IPQ96QF0 476 aaPredicted RBP14.2□□□□□ -0.14
NUP54-201ENST00000264883 RPS6KC1Q96S38 1066 aa14.2□□□□□ -0.14
NUP54-201ENST00000264883 AZI2Q9H6S1 392 aa14.2□□□□□ -0.14
NUP54-201ENST00000264883 CEP72Q9P209 647 aa14.2□□□□□ -0.14
NUP54-201ENST00000264883 UTP11Q9Y3A2 253 aaKnown RBP14.2□□□□□ -0.14
NUP54-201ENST00000264883 hCG_1984214I3L0E3 225 aa14.19□□□□□ -0.14
NUP54-201ENST00000264883 TTI1O43156 1089 aa14.19□□□□□ -0.14
NUP54-201ENST00000264883 SERPINB2P05120 415 aa14.19□□□□□ -0.14
NUP54-201ENST00000264883 FCER1AP12319 257 aa14.19□□□□□ -0.14
NUP54-201ENST00000264883 CALB2P22676 271 aa14.19□□□□□ -0.14
NUP54-201ENST00000264883 SP100P23497 879 aaPredicted RBP14.19□□□□□ -0.14
NUP54-201ENST00000264883 RAD23BP54727 409 aa14.19□□□□□ -0.14
NUP54-201ENST00000264883 USP4Q13107 963 aa14.19□□□□□ -0.14
NUP54-201ENST00000264883 DYNC1I2Q13409 638 aaKnown RBP14.19□□□□□ -0.14
NUP54-201ENST00000264883 CRY2Q49AN0 593 aa14.19□□□□□ -0.14
NUP54-201ENST00000264883 HHATQ5VTY9 493 aa14.19□□□□□ -0.14
NUP54-201ENST00000264883 ZNF713Q8N859 430 aaPredicted RBP14.19□□□□□ -0.14
NUP54-201ENST00000264883 FMO2Q99518 471 aa14.19□□□□□ -0.14
NUP54-201ENST00000264883 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.19□□□□□ -0.143e-9■□□□□ 10
NUP54-201ENST00000264883 RAB34Q9BZG1 259 aa14.19□□□□□ -0.14
NUP54-201ENST00000264883 TRIM7Q9C029 511 aa14.19□□□□□ -0.14
NUP54-201ENST00000264883 SLITRK6Q9H5Y7 841 aa14.19□□□□□ -0.14
NUP54-201ENST00000264883 ZMYND8Q9ULU4 1186 aaPredicted RBP14.19□□□□□ -0.14
NUP54-201ENST00000264883 NOC2LQ9Y3T9 749 aaKnown RBP14.19□□□□□ -0.14
NUP54-201ENST00000264883 CCDC88AQ3V6T2 1871 aa14.19□□□□□ -0.14
NUP54-201ENST00000264883 PALM3A6NDB9 673 aaPredicted RBP14.19□□□□□ -0.14
NUP54-201ENST00000264883 SMIM23A6NLE4 172 aa14.19□□□□□ -0.14
NUP54-201ENST00000264883 POLRMTO00411 1230 aaKnown RBP14.19□□□□□ -0.14
NUP54-201ENST00000264883 NUDT17P0C025 328 aa14.19□□□□□ -0.14
NUP54-201ENST00000264883 IFI35P80217 286 aaPredicted RBP14.19□□□□□ -0.14
NUP54-201ENST00000264883 TFAP4Q01664 338 aa14.19□□□□□ -0.14
NUP54-201ENST00000264883 RNF220Q5VTB9 566 aa14.19□□□□□ -0.14
NUP54-201ENST00000264883 SFMBT2Q5VUG0 894 aa14.19□□□□□ -0.14
NUP54-201ENST00000264883 LRRC15Q8TF66 581 aa14.19□□□□□ -0.14
NUP54-201ENST00000264883 SEC14L1Q92503 715 aa14.19□□□□□ -0.14
NUP54-201ENST00000264883 KIFAP3Q92845 792 aa14.19□□□□□ -0.14
NUP54-201ENST00000264883 DTNBP1Q96EV8 351 aa14.19□□□□□ -0.14
NUP54-201ENST00000264883 TXLNGYQ9BZA5 131 aa14.19□□□□□ -0.14
NUP54-201ENST00000264883 VCXQ9H320 206 aa14.19□□□□□ -0.14
NUP54-201ENST00000264883 RNPEPL1Q9HAU8 725 aa14.19□□□□□ -0.14
NUP54-201ENST00000264883 PCMTD2Q9NV79 361 aa14.19□□□□□ -0.14
NUP54-201ENST00000264883 TFCP2L1Q9NZI6 479 aa14.19□□□□□ -0.14
NUP54-201ENST00000264883 NRXN2Q9P2S2 1712 aa14.19□□□□□ -0.14
NUP54-201ENST00000264883 ATP8B3O60423 1300 aa14.19□□□□□ -0.14
NUP54-201ENST00000264883 ESYT2A0FGR8 921 aa14.18□□□□□ -0.14
NUP54-201ENST00000264883 BTNL10A8MVZ5 291 aa14.18□□□□□ -0.14
NUP54-201ENST00000264883 CCNT1O60563 726 aaKnown RBP14.18□□□□□ -0.14
NUP54-201ENST00000264883 GNA14O95837 355 aa14.18□□□□□ -0.14
NUP54-201ENST00000264883 IMPDH2P12268 514 aa14.18□□□□□ -0.14
NUP54-201ENST00000264883 RFC5P40937 340 aa14.18□□□□□ -0.14
NUP54-201ENST00000264883 FXR2P51116 673 aaKnown RBP eCLIP14.18□□□□□ -0.14
NUP54-201ENST00000264883 USP11P51784 963 aa14.18□□□□□ -0.14
NUP54-201ENST00000264883 TMEM266Q2M3C6 531 aa14.18□□□□□ -0.14
NUP54-201ENST00000264883 C10orf76Q5T2E6 689 aa14.18□□□□□ -0.14
NUP54-201ENST00000264883 C12orf60Q5U649 245 aa14.18□□□□□ -0.14
NUP54-201ENST00000264883 SDCCAG8Q86SQ7 713 aaPredicted RBP14.18□□□□□ -0.14
NUP54-201ENST00000264883 COL23A1Q86Y22 540 aaPredicted RBP14.18□□□□□ -0.14
NUP54-201ENST00000264883 ZNF513Q8N8E2 541 aaPredicted RBP14.18□□□□□ -0.14
NUP54-201ENST00000264883 TBC1D5Q92609 795 aa14.18□□□□□ -0.14
NUP54-201ENST00000264883 CAMKK2Q96RR4 588 aa14.18□□□□□ -0.14
NUP54-201ENST00000264883 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.18□□□□□ -0.14
NUP54-201ENST00000264883 ZNF287Q9HBT7 754 aa14.18□□□□□ -0.14
NUP54-201ENST00000264883 RXFP1Q9HBX9 757 aa14.18□□□□□ -0.14
NUP54-201ENST00000264883 GOPCQ9HD26 462 aa14.18□□□□□ -0.14
NUP54-201ENST00000264883 NLRC4Q9NPP4 1024 aa14.18□□□□□ -0.14
NUP54-201ENST00000264883 WTIPA6NIX2 430 aaPredicted RBP14.18□□□□□ -0.14
NUP54-201ENST00000264883 O00370 1275 aa14.18□□□□□ -0.14
NUP54-201ENST00000264883 AGTP01019 485 aa14.18□□□□□ -0.14
NUP54-201ENST00000264883 ITGA4P13612 1032 aa14.18□□□□□ -0.14
NUP54-201ENST00000264883 PEX5P50542 639 aa14.18□□□□□ -0.14
NUP54-201ENST00000264883 SLC18A3Q16572 532 aa14.18□□□□□ -0.14
NUP54-201ENST00000264883 TSNAXIP1Q2TAA8 658 aa14.18□□□□□ -0.14
NUP54-201ENST00000264883 DENND2CQ68D51 928 aa14.18□□□□□ -0.14
NUP54-201ENST00000264883 FITM2Q8N6M3 262 aa14.18□□□□□ -0.14
NUP54-201ENST00000264883 SLC17A8Q8NDX2 589 aa14.18□□□□□ -0.14
NUP54-201ENST00000264883 ATL2Q8NHH9 583 aa14.18□□□□□ -0.14
NUP54-201ENST00000264883 NEK9Q8TD19 979 aa14.18□□□□□ -0.14
NUP54-201ENST00000264883 PACSIN1Q9BY11 444 aa14.18□□□□□ -0.14
NUP54-201ENST00000264883 CELF4Q9BZC1 486 aaKnown RBP14.18□□□□□ -0.14
NUP54-201ENST00000264883 FGFR1OP2Q9NVK5 253 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms