RNA–Protein interactions for RNA: ENST00000259216.4

CFC1-201, Transcript of cripto, FRL-1, cryptic family 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFC1, Length 1,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFC1-201ENST00000259216 NCOR1O75376 2440 aa22.7■■□□□ 1.22
CFC1-201ENST00000259216 GRM6O15303 877 aa22.7■■□□□ 1.22
CFC1-201ENST00000259216 CAMK1Q14012 370 aa22.7■■□□□ 1.22
CFC1-201ENST00000259216 TRIM29Q14134 588 aa22.7■■□□□ 1.22
CFC1-201ENST00000259216 COL19A1Q14993 1142 aa22.7■■□□□ 1.22
CFC1-201ENST00000259216 FBXO18Q8NFZ0 1043 aa22.7■■□□□ 1.22
CFC1-201ENST00000259216 HSD17B14Q9BPX1 270 aa22.7■■□□□ 1.22
CFC1-201ENST00000259216 COG5Q9UP83 839 aa22.7■■□□□ 1.22
CFC1-201ENST00000259216 ARID2Q68CP9 1835 aa22.69■■□□□ 1.22
CFC1-201ENST00000259216 DENND3A2RUS2 1198 aa22.69■■□□□ 1.22
CFC1-201ENST00000259216 ZBTB39O15060 712 aa22.69■■□□□ 1.22
CFC1-201ENST00000259216 SLITRK3O94933 977 aa22.69■■□□□ 1.22
CFC1-201ENST00000259216 KCNQ1P51787 676 aa22.69■■□□□ 1.22
CFC1-201ENST00000259216 SKIV2LQ15477 1246 aaKnown RBP22.69■■□□□ 1.22
CFC1-201ENST00000259216 CALCRLQ16602 461 aa22.69■■□□□ 1.22
CFC1-201ENST00000259216 FAM102BQ5T8I3 360 aa22.69■■□□□ 1.22
CFC1-201ENST00000259216 NCAPH2Q6IBW4 605 aa22.69■■□□□ 1.22
CFC1-201ENST00000259216 SYMPKQ92797 1274 aaKnown RBP22.69■■□□□ 1.22
CFC1-201ENST00000259216 DYDC2Q96IM9 177 aa22.69■■□□□ 1.22
CFC1-201ENST00000259216 C8orf76Q96K31 380 aa22.69■■□□□ 1.22
CFC1-201ENST00000259216 C11orf84Q9BUA3 381 aaPredicted RBP22.69■■□□□ 1.22
CFC1-201ENST00000259216 PLVAPQ9BX97 442 aa22.69■■□□□ 1.22
CFC1-201ENST00000259216 ELAC1Q9H777 363 aaKnown RBP22.69■■□□□ 1.22
CFC1-201ENST00000259216 RWDD3Q9Y3V2 267 aa22.69■■□□□ 1.22
CFC1-201ENST00000259216 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.68■■□□□ 1.22
CFC1-201ENST00000259216 NEMFO60524 1076 aa22.68■■□□□ 1.22
CFC1-201ENST00000259216 CSDE1O75534 798 aaKnown RBP22.68■■□□□ 1.22
CFC1-201ENST00000259216 LYPLA2O95372 231 aa22.68■■□□□ 1.22
CFC1-201ENST00000259216 CD2BP2O95400 341 aaKnown RBP22.68■■□□□ 1.22
CFC1-201ENST00000259216 FGFR4P22455 802 aa22.68■■□□□ 1.22
CFC1-201ENST00000259216 HMGN5P82970 282 aaKnown RBP22.68■■□□□ 1.22
CFC1-201ENST00000259216 RABEP1Q15276 862 aa22.68■■□□□ 1.22
CFC1-201ENST00000259216 PAN2Q504Q3 1202 aaKnown RBP22.68■■□□□ 1.22
CFC1-201ENST00000259216 HLA-CQ95604 372 aa22.68■■□□□ 1.22
CFC1-201ENST00000259216 TMEM161AQ9NX61 479 aa22.68■■□□□ 1.22
CFC1-201ENST00000259216 SUCLA2Q9P2R7 463 aaPredicted RBP22.68■■□□□ 1.22
CFC1-201ENST00000259216 HCSTQ9UBK5 93 aa22.68■■□□□ 1.22
CFC1-201ENST00000259216 PCDHA12Q9UN75 941 aa22.68■■□□□ 1.22
CFC1-201ENST00000259216 PPME1Q9Y570 386 aa22.68■■□□□ 1.22
CFC1-201ENST00000259216 DKC1O60832 514 aaKnown RBP eCLIP22.67■■□□□ 1.22
CFC1-201ENST00000259216 BAG4O95429 457 aaKnown RBP22.67■■□□□ 1.22
CFC1-201ENST00000259216 YWHABP31946 246 aaKnown RBP22.67■■□□□ 1.22
CFC1-201ENST00000259216 CYP4A11Q02928 519 aa22.67■■□□□ 1.22
CFC1-201ENST00000259216 CTTNQ14247 550 aaKnown RBP22.67■■□□□ 1.22
CFC1-201ENST00000259216 PTPROQ16827 1216 aa22.67■■□□□ 1.22
CFC1-201ENST00000259216 ZNF410Q86VK4 478 aa22.67■■□□□ 1.22
CFC1-201ENST00000259216 KSR1Q8IVT5 923 aa22.67■■□□□ 1.22
CFC1-201ENST00000259216 ADAMTS19Q8TE59 1207 aa22.67■■□□□ 1.22
CFC1-201ENST00000259216 P2RX5Q93086 422 aa22.67■■□□□ 1.22
CFC1-201ENST00000259216 EIF2AK1Q9BQI3 630 aaKnown RBP22.67■■□□□ 1.22
CFC1-201ENST00000259216 LMAN2LQ9H0V9 348 aa22.67■■□□□ 1.22
CFC1-201ENST00000259216 FOXP1Q9H334 677 aaPredicted RBP22.67■■□□□ 1.22
CFC1-201ENST00000259216 ZSWIM4Q9H7M6 989 aa22.67■■□□□ 1.22
CFC1-201ENST00000259216 TTC12Q9H892 705 aaPredicted RBP22.67■■□□□ 1.22
CFC1-201ENST00000259216 PLAGL2Q9UPG8 496 aa22.67■■□□□ 1.22
CFC1-201ENST00000259216 PCDHB7Q9Y5E2 793 aa22.67■■□□□ 1.22
CFC1-201ENST00000259216 A0A087WZ62 844 aa22.66■■□□□ 1.22
CFC1-201ENST00000259216 FGFR1P11362 822 aa22.66■■□□□ 1.22
CFC1-201ENST00000259216 ATF7P17544 494 aaPredicted RBP22.66■■□□□ 1.22
CFC1-201ENST00000259216 TIGD5Q53EQ6 642 aa22.66■■□□□ 1.22
CFC1-201ENST00000259216 ZNF598Q86UK7 904 aaKnown RBP22.66■■□□□ 1.22
CFC1-201ENST00000259216 ECHDC2Q86YB7 292 aa22.66■■□□□ 1.22
CFC1-201ENST00000259216 NLRP7Q8WX94 980 aa22.66■■□□□ 1.22
CFC1-201ENST00000259216 CEP170P1Q96L14 293 aa22.66■■□□□ 1.22
CFC1-201ENST00000259216 FDXACB1Q9BRP7 624 aaPredicted RBP22.66■■□□□ 1.22
CFC1-201ENST00000259216 IFT122Q9HBG6 1241 aa22.66■■□□□ 1.22
CFC1-201ENST00000259216 XPNPEP1Q9NQW7 623 aa22.66■■□□□ 1.22
CFC1-201ENST00000259216 LRFN2Q9ULH4 789 aa22.66■■□□□ 1.22
CFC1-201ENST00000259216 MARCH6O60337 910 aa22.65■■□□□ 1.22
CFC1-201ENST00000259216 ITGB1P05556 798 aa22.65■■□□□ 1.22
CFC1-201ENST00000259216 DNAJB1P25685 340 aa22.65■■□□□ 1.22
CFC1-201ENST00000259216 CDC42EP1Q00587 391 aa22.65■■□□□ 1.22
CFC1-201ENST00000259216 TCEAL5Q5H9L2 206 aa22.65■■□□□ 1.22
CFC1-201ENST00000259216 JPH2Q9BR39 696 aaPredicted RBP22.65■■□□□ 1.22
CFC1-201ENST00000259216 GCOM2Q9BZD3 368 aaPredicted RBP22.65■■□□□ 1.22
CFC1-201ENST00000259216 UBE2ZQ9H832 354 aaPredicted RBP22.65■■□□□ 1.22
CFC1-201ENST00000259216 BDP1A6H8Y1 2624 aa22.64■■□□□ 1.22
CFC1-201ENST00000259216 TCF20Q9UGU0 1960 aaKnown RBP22.64■■□□□ 1.21
CFC1-201ENST00000259216 A0A0U1RQF3 1178 aa22.64■■□□□ 1.21
CFC1-201ENST00000259216 POTEMA6NI47 508 aa22.64■■□□□ 1.21
CFC1-201ENST00000259216 MCM7P33993 719 aa22.64■■□□□ 1.21
CFC1-201ENST00000259216 RFC5P40937 340 aa22.64■■□□□ 1.21
CFC1-201ENST00000259216 TXKP42681 527 aa22.64■■□□□ 1.21
CFC1-201ENST00000259216 DNM2P50570 870 aa22.64■■□□□ 1.21
CFC1-201ENST00000259216 SAFBQ15424 915 aaKnown RBP eCLIP22.64■■□□□ 1.21
CFC1-201ENST00000259216 AAK1Q2M2I8 961 aa22.64■■□□□ 1.21
CFC1-201ENST00000259216 NAALADL2Q58DX5 795 aa22.64■■□□□ 1.21
CFC1-201ENST00000259216 RHPN2Q8IUC4 686 aa22.64■■□□□ 1.21
CFC1-201ENST00000259216 SPPL3Q8TCT6 385 aa22.64■■□□□ 1.21
CFC1-201ENST00000259216 SLC7A3Q8WY07 619 aa22.64■■□□□ 1.21
CFC1-201ENST00000259216 TRAIPQ9BWF2 469 aa22.64■■□□□ 1.21
CFC1-201ENST00000259216 ATP6V0A4Q9HBG4 840 aa22.64■■□□□ 1.21
CFC1-201ENST00000259216 ALG13Q9NP73 1137 aaKnown RBP22.64■■□□□ 1.21
CFC1-201ENST00000259216 MUC3AQ02505 3323 aa22.64■■□□□ 1.21
CFC1-201ENST00000259216 TBKBP1A7MCY6 615 aa22.63■■□□□ 1.21
CFC1-201ENST00000259216 SPATA31C1P0DKV0 1188 aa22.63■■□□□ 1.21
CFC1-201ENST00000259216 IBSPP21815 317 aaPredicted RBP22.63■■□□□ 1.21
CFC1-201ENST00000259216 EMC2Q15006 297 aa22.63■■□□□ 1.21
CFC1-201ENST00000259216 CLLU1OSQ5K130 101 aa22.63■■□□□ 1.21
CFC1-201ENST00000259216 LRRC55Q6ZSA7 311 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms