RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.97□□□□□ -1.61
VPS13C-201ENST00000249837 TESPA1A2RU30 521 aaPredicted RBP4.97□□□□□ -1.61
VPS13C-201ENST00000249837 LRRIQ4A6NIV6 560 aa4.97□□□□□ -1.61
VPS13C-201ENST00000249837 ABL1P00519 1130 aa4.97□□□□□ -1.61
VPS13C-201ENST00000249837 KRT14P02533 472 aa4.97□□□□□ -1.61
VPS13C-201ENST00000249837 PMS2P54278 862 aa4.97□□□□□ -1.61
VPS13C-201ENST00000249837 PTK2Q05397 1052 aa4.97□□□□□ -1.61
VPS13C-201ENST00000249837 ZNF449Q6P9G9 518 aa4.97□□□□□ -1.61
VPS13C-201ENST00000249837 MIGA2Q7L4E1 593 aa4.97□□□□□ -1.61
VPS13C-201ENST00000249837 ANKRD35Q8N283 1001 aa4.97□□□□□ -1.61
VPS13C-201ENST00000249837 RAPGEF5Q92565 580 aa4.97□□□□□ -1.61
VPS13C-201ENST00000249837 ARHGEF1Q92888 912 aaKnown RBP4.97□□□□□ -1.61
VPS13C-201ENST00000249837 EIF2AK1Q9BQI3 630 aaKnown RBP4.97□□□□□ -1.61
VPS13C-201ENST00000249837 KMT5AQ9NQR1 393 aa4.97□□□□□ -1.61
VPS13C-201ENST00000249837 KBTBD4Q9NVX7 518 aa4.97□□□□□ -1.61
VPS13C-201ENST00000249837 FLT1P17948 1338 aa4.97□□□□□ -1.61
VPS13C-201ENST00000249837 PEX19P40855 299 aa4.97□□□□□ -1.61
VPS13C-201ENST00000249837 SLMAPQ14BN4 828 aa4.97□□□□□ -1.61
VPS13C-201ENST00000249837 PAPD7Q5XG87 772 aaKnown RBP4.97□□□□□ -1.61
VPS13C-201ENST00000249837 VGLL2Q8N8G2 317 aa4.97□□□□□ -1.61
VPS13C-201ENST00000249837 SH2D3AQ9BRG2 576 aa4.97□□□□□ -1.61
VPS13C-201ENST00000249837 ECT2Q9H8V3 914 aa4.97□□□□□ -1.61
VPS13C-201ENST00000249837 ZWILCHQ9H900 591 aa4.97□□□□□ -1.61
VPS13C-201ENST00000249837 ATMINO43313 823 aaPredicted RBP4.97□□□□□ -1.61
VPS13C-201ENST00000249837 FAM153BP0C7A2 387 aa4.97□□□□□ -1.61
VPS13C-201ENST00000249837 ADCY2Q08462 1091 aa4.97□□□□□ -1.61
VPS13C-201ENST00000249837 PTGISQ16647 500 aa4.97□□□□□ -1.61
VPS13C-201ENST00000249837 FAM153CQ494X1 144 aa4.97□□□□□ -1.61
VPS13C-201ENST00000249837 SCYL2Q6P3W7 929 aa4.97□□□□□ -1.61
VPS13C-201ENST00000249837 FAM153AQ9UHL3 310 aa4.97□□□□□ -1.61
VPS13C-201ENST00000249837 TRIM37O94972 964 aa4.97□□□□□ -1.61
VPS13C-201ENST00000249837 MT-ND3P03897 115 aa4.97□□□□□ -1.61
VPS13C-201ENST00000249837 HSPA1LP34931 641 aa4.97□□□□□ -1.61
VPS13C-201ENST00000249837 PDIA5Q14554 519 aa4.97□□□□□ -1.61
VPS13C-201ENST00000249837 TAF11Q15544 211 aa4.97□□□□□ -1.61
VPS13C-201ENST00000249837 KLHDC7AQ5VTJ3 777 aa4.97□□□□□ -1.61
VPS13C-201ENST00000249837 CENPPQ6IPU0 288 aa4.97□□□□□ -1.61
VPS13C-201ENST00000249837 TLR10Q9BXR5 811 aa4.97□□□□□ -1.61
VPS13C-201ENST00000249837 CHORDC1Q9UHD1 332 aaPredicted RBP4.97□□□□□ -1.61
VPS13C-201ENST00000249837 PNMA2Q9UL42 364 aa4.97□□□□□ -1.61
VPS13C-201ENST00000249837 ERGIC2Q96RQ1 377 aa4.96□□□□□ -1.61
VPS13C-201ENST00000249837 ADAM22Q9P0K1 906 aa4.96□□□□□ -1.61
VPS13C-201ENST00000249837 ANAPC7Q9UJX3 599 aa4.96□□□□□ -1.61
VPS13C-201ENST00000249837 TTC7AQ9ULT0 858 aaPredicted RBP4.96□□□□□ -1.61
VPS13C-201ENST00000249837 UBR1Q8IWV7 1749 aa4.96□□□□□ -1.61
VPS13C-201ENST00000249837 EXOC1LA0A1B0GW35 172 aa4.96□□□□□ -1.61
VPS13C-201ENST00000249837 SOX5P35711 763 aa4.96□□□□□ -1.61
VPS13C-201ENST00000249837 STRN3Q13033 797 aa4.96□□□□□ -1.61
VPS13C-201ENST00000249837 PPP2R5AQ15172 486 aa4.96□□□□□ -1.61
VPS13C-201ENST00000249837 ANKRD20A3Q5VUR7 823 aa4.96□□□□□ -1.61
VPS13C-201ENST00000249837 TSEN2Q8NCE0 465 aaKnown RBP4.96□□□□□ -1.61
VPS13C-201ENST00000249837 TPCN2Q8NHX9 752 aa4.96□□□□□ -1.61
VPS13C-201ENST00000249837 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.96□□□□□ -1.61
VPS13C-201ENST00000249837 CHMP6Q96FZ7 201 aa4.96□□□□□ -1.61
VPS13C-201ENST00000249837 RGPD5Q99666 1765 aa4.96□□□□□ -1.62
VPS13C-201ENST00000249837 GOLGA8MH3BSY2 632 aa4.96□□□□□ -1.62
VPS13C-201ENST00000249837 BRAFP15056 766 aa4.96□□□□□ -1.62
VPS13C-201ENST00000249837 AOC3Q16853 763 aa4.96□□□□□ -1.62
VPS13C-201ENST00000249837 EPC2Q52LR7 807 aa4.96□□□□□ -1.62
VPS13C-201ENST00000249837 PPP4R3CPQ6ZMV5 832 aa4.96□□□□□ -1.62
VPS13C-201ENST00000249837 SEC16BQ96JE7 1060 aa4.96□□□□□ -1.62
VPS13C-201ENST00000249837 HSD3B7Q9H2F3 369 aa4.96□□□□□ -1.62
VPS13C-201ENST00000249837 REXO2Q9Y3B8 237 aaKnown RBP4.96□□□□□ -1.62
VPS13C-201ENST00000249837 CCT8L1PA6NM43 557 aa4.96□□□□□ -1.62
VPS13C-201ENST00000249837 hCG_1984214I3L0E3 225 aa4.96□□□□□ -1.62
VPS13C-201ENST00000249837 KLRC1P26715 233 aa4.96□□□□□ -1.62
VPS13C-201ENST00000249837 HSD17B3P37058 310 aa4.96□□□□□ -1.62
VPS13C-201ENST00000249837 PIK3CAP42336 1068 aa4.96□□□□□ -1.62
VPS13C-201ENST00000249837 RIC1Q4ADV7 1423 aa4.96□□□□□ -1.62
VPS13C-201ENST00000249837 ZNF713Q8N859 430 aaPredicted RBP4.96□□□□□ -1.62
VPS13C-201ENST00000249837 CFAP61Q8NHU2 1237 aa4.96□□□□□ -1.62
VPS13C-201ENST00000249837 NUP85Q9BW27 656 aa4.96□□□□□ -1.62
VPS13C-201ENST00000249837 EYA4O95677 639 aa4.96□□□□□ -1.62
VPS13C-201ENST00000249837 FGFR4P22455 802 aa4.96□□□□□ -1.62
VPS13C-201ENST00000249837 RWDD2BP57060 319 aa4.96□□□□□ -1.62
VPS13C-201ENST00000249837 PADI6Q6TGC4 694 aa4.96□□□□□ -1.62
VPS13C-201ENST00000249837 PNMA5Q96PV4 448 aa4.96□□□□□ -1.62
VPS13C-201ENST00000249837 AGPAT1Q99943 283 aa4.96□□□□□ -1.62
VPS13C-201ENST00000249837 DNAI2Q9GZS0 605 aa4.96□□□□□ -1.62
VPS13C-201ENST00000249837 SLITRK6Q9H5Y7 841 aa4.96□□□□□ -1.62
VPS13C-201ENST00000249837 G3BP2Q9UN86 482 aaKnown RBP4.96□□□□□ -1.62
VPS13C-201ENST00000249837 RIMBP3CA6NJZ7 1639 aa4.96□□□□□ -1.62
VPS13C-201ENST00000249837 RIMBP3BA6NNM3 1639 aa4.96□□□□□ -1.62
VPS13C-201ENST00000249837 RIMBP3Q9UFD9 1639 aa4.96□□□□□ -1.62
VPS13C-201ENST00000249837 TRADDQ15628 312 aa4.96□□□□□ -1.62
VPS13C-201ENST00000249837 GRIK5Q16478 980 aa4.96□□□□□ -1.62
VPS13C-201ENST00000249837 ZC2HC1CQ53FD0 456 aaPredicted RBP4.96□□□□□ -1.62
VPS13C-201ENST00000249837 NUGGCQ68CJ6 796 aa4.96□□□□□ -1.62
VPS13C-201ENST00000249837 ANKMY2Q8IV38 441 aa4.96□□□□□ -1.62
VPS13C-201ENST00000249837 RHOT2Q8IXI1 618 aa4.96□□□□□ -1.62
VPS13C-201ENST00000249837 SLC30A5Q8TAD4 765 aa4.96□□□□□ -1.62
VPS13C-201ENST00000249837 P3H4Q92791 437 aa4.96□□□□□ -1.62
VPS13C-201ENST00000249837 MTMR8Q96EF0 704 aa4.96□□□□□ -1.62
VPS13C-201ENST00000249837 TXLNGQ9NUQ3 528 aa4.96□□□□□ -1.62
VPS13C-201ENST00000249837 RAD17O75943 681 aa4.96□□□□□ -1.62
VPS13C-201ENST00000249837 TNNC2P02585 160 aa4.96□□□□□ -1.62
VPS13C-201ENST00000249837 POLGP54098 1239 aaPredicted RBP4.96□□□□□ -1.62
VPS13C-201ENST00000249837 DMP1Q13316 513 aaPredicted RBP4.96□□□□□ -1.62
VPS13C-201ENST00000249837 MUM1Q2TAK8 710 aa4.96□□□□□ -1.62
VPS13C-201ENST00000249837 RNF207Q6ZRF8 634 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms