RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 TTC26A0AVF1 554 aa12.38□□□□□ -0.43
NOD1-201ENST00000222823 MAP7Q14244 749 aa12.38□□□□□ -0.43
NOD1-201ENST00000222823 SF3B3Q15393 1217 aaKnown RBP12.38□□□□□ -0.43
NOD1-201ENST00000222823 MAPK6Q16659 721 aa12.38□□□□□ -0.43
NOD1-201ENST00000222823 BBS9Q3SYG4 887 aa12.38□□□□□ -0.43
NOD1-201ENST00000222823 ALS2CLQ60I27 953 aa12.38□□□□□ -0.43
NOD1-201ENST00000222823 SRBD1Q8N5C6 995 aaKnown RBP12.38□□□□□ -0.43
NOD1-201ENST00000222823 DYDC2Q96IM9 177 aa12.38□□□□□ -0.43
NOD1-201ENST00000222823 FAM49AQ9H0Q0 323 aaPredicted RBP12.38□□□□□ -0.43
NOD1-201ENST00000222823 NGRNQ9NPE2 291 aaKnown RBP12.38□□□□□ -0.43
NOD1-201ENST00000222823 TBK1Q9UHD2 729 aa12.38□□□□□ -0.43
NOD1-201ENST00000222823 PNMA6AP0CW24 399 aaPredicted RBP12.37□□□□□ -0.43
NOD1-201ENST00000222823 QARSP47897 775 aaKnown RBP12.37□□□□□ -0.43
NOD1-201ENST00000222823 MRPS25P82663 173 aaKnown RBP12.37□□□□□ -0.43
NOD1-201ENST00000222823 PLCB4Q15147 1175 aa12.37□□□□□ -0.43
NOD1-201ENST00000222823 NTRK3Q16288 839 aa12.37□□□□□ -0.43
NOD1-201ENST00000222823 SNRNP48Q6IEG0 339 aaKnown RBP12.37□□□□□ -0.43
NOD1-201ENST00000222823 C4orf50Q6ZRC1 276 aa12.37□□□□□ -0.43
NOD1-201ENST00000222823 ARMCX2Q7L311 632 aa12.37□□□□□ -0.43
NOD1-201ENST00000222823 PDIK1LQ8N165 341 aa12.37□□□□□ -0.43
NOD1-201ENST00000222823 KIAA1586Q9HCI6 787 aa12.37□□□□□ -0.43
NOD1-201ENST00000222823 IPO11Q9UI26 975 aaKnown RBP12.37□□□□□ -0.43
NOD1-201ENST00000222823 NFU1Q9UMS0 254 aa12.37□□□□□ -0.43
NOD1-201ENST00000222823 NOVA2Q9UNW9 492 aaKnown RBP12.37□□□□□ -0.43
NOD1-201ENST00000222823 MORC2Q9Y6X9 1032 aaPredicted RBP12.37□□□□□ -0.43
NOD1-201ENST00000222823 ANO9A1A5B4 782 aa12.37□□□□□ -0.43
NOD1-201ENST00000222823 MIF4GDA9UHW6 222 aaKnown RBP12.37□□□□□ -0.43
NOD1-201ENST00000222823 IPO5O00410 1097 aaKnown RBP12.37□□□□□ -0.43
NOD1-201ENST00000222823 PALMO75781 387 aa12.37□□□□□ -0.43
NOD1-201ENST00000222823 ZRANB2O95218 330 aaKnown RBP eCLIP12.37□□□□□ -0.43
NOD1-201ENST00000222823 P4HBP07237 508 aaKnown RBP12.37□□□□□ -0.43
NOD1-201ENST00000222823 ASPHQ12797 758 aa12.37□□□□□ -0.43
NOD1-201ENST00000222823 NFX1Q12986 1120 aaKnown RBP12.37□□□□□ -0.43
NOD1-201ENST00000222823 CATSPER4Q7RTX7 472 aa12.37□□□□□ -0.43
NOD1-201ENST00000222823 SCINQ9Y6U3 715 aa12.37□□□□□ -0.43
NOD1-201ENST00000222823 A0A1B0GTH6 734 aa12.37□□□□□ -0.43
NOD1-201ENST00000222823 NTSR2O95665 410 aa12.37□□□□□ -0.43
NOD1-201ENST00000222823 IRX4P78413 519 aa12.37□□□□□ -0.43
NOD1-201ENST00000222823 RNASELQ05823 741 aaKnown RBP12.37□□□□□ -0.43
NOD1-201ENST00000222823 FMR1Q06787 632 aaKnown RBP eCLIP12.37□□□□□ -0.43
NOD1-201ENST00000222823 RBBP5Q15291 538 aaKnown RBP12.37□□□□□ -0.43
NOD1-201ENST00000222823 RAPH1Q70E73 1250 aa12.37□□□□□ -0.43
NOD1-201ENST00000222823 SP8Q8IXZ3 490 aa12.37□□□□□ -0.43
NOD1-201ENST00000222823 TCP11Q8WWU5 503 aa12.37□□□□□ -0.43
NOD1-201ENST00000222823 EXOC4Q96A65 974 aa12.37□□□□□ -0.43
NOD1-201ENST00000222823 SMYD2Q9NRG4 433 aa12.37□□□□□ -0.43
NOD1-201ENST00000222823 SEL1LQ9UBV2 794 aa12.37□□□□□ -0.43
NOD1-201ENST00000222823 CNOT8Q9UFF9 292 aaKnown RBP12.37□□□□□ -0.43
NOD1-201ENST00000222823 PNMA3Q9UL41 463 aa12.37□□□□□ -0.43
NOD1-201ENST00000222823 COL5A2P05997 1499 aaPredicted RBP12.37□□□□□ -0.43
NOD1-201ENST00000222823 SLC16A4O15374 487 aa12.37□□□□□ -0.43
NOD1-201ENST00000222823 BAG2O95816 211 aa12.37□□□□□ -0.43
NOD1-201ENST00000222823 MT-ND3P03897 115 aa12.37□□□□□ -0.43
NOD1-201ENST00000222823 SEMA3FQ13275 785 aa12.37□□□□□ -0.43
NOD1-201ENST00000222823 TMED2Q15363 201 aa12.37□□□□□ -0.43
NOD1-201ENST00000222823 MUM1Q2TAK8 710 aa12.37□□□□□ -0.43
NOD1-201ENST00000222823 SIX6OS1Q8N1H7 587 aa12.37□□□□□ -0.43
NOD1-201ENST00000222823 TMEM35BQ8NCS4 154 aa12.37□□□□□ -0.43
NOD1-201ENST00000222823 ATP6V0A4Q9HBG4 840 aa12.37□□□□□ -0.43
NOD1-201ENST00000222823 ANAPC7Q9UJX3 599 aa12.37□□□□□ -0.43
NOD1-201ENST00000222823 ADGRG1Q9Y653 693 aa12.37□□□□□ -0.43
NOD1-201ENST00000222823 LRRC37A3O60309 1634 aa12.36□□□□□ -0.43
NOD1-201ENST00000222823 TCHHQ07283 1943 aa12.36□□□□□ -0.43
NOD1-201ENST00000222823 EXOC1LA0A1B0GW35 172 aa12.36□□□□□ -0.43
NOD1-201ENST00000222823 ZWINTO95229 277 aa12.36□□□□□ -0.43
NOD1-201ENST00000222823 USP11P51784 963 aa12.36□□□□□ -0.43
NOD1-201ENST00000222823 EIF3BP55884 814 aaKnown RBP12.36□□□□□ -0.43
NOD1-201ENST00000222823 MKRN3Q13064 507 aaKnown RBP12.36□□□□□ -0.43
NOD1-201ENST00000222823 BIRC2Q13490 618 aa12.36□□□□□ -0.43
NOD1-201ENST00000222823 CUL1Q13616 776 aa12.36□□□□□ -0.43
NOD1-201ENST00000222823 SLC27A3Q5K4L6 730 aa12.36□□□□□ -0.43
NOD1-201ENST00000222823 MICAL1Q8TDZ2 1067 aa12.36□□□□□ -0.43
NOD1-201ENST00000222823 SART1O43290 800 aaKnown RBP12.36□□□□□ -0.43
NOD1-201ENST00000222823 SRGAP2BP0DMP2 458 aa12.36□□□□□ -0.43
NOD1-201ENST00000222823 MCUQ8NE86 351 aa12.36□□□□□ -0.43
NOD1-201ENST00000222823 FAM167AQ96KS9 214 aa12.36□□□□□ -0.43
NOD1-201ENST00000222823 ARHGEF37A1IGU5 675 aa12.36□□□□□ -0.43
NOD1-201ENST00000222823 DENND3A2RUS2 1198 aa12.36□□□□□ -0.43
NOD1-201ENST00000222823 SRGAP2O75044 1071 aa12.36□□□□□ -0.43
NOD1-201ENST00000222823 HERC5Q9UII4 1024 aaKnown RBP12.36□□□□□ -0.43
NOD1-201ENST00000222823 ABCB11O95342 1321 aa12.36□□□□□ -0.43
NOD1-201ENST00000222823 TCRBV5S4A2TA0A5A2 114 aa12.35□□□□□ -0.43
NOD1-201ENST00000222823 NR1D1P20393 614 aa12.35□□□□□ -0.43
NOD1-201ENST00000222823 ARHGEF6Q15052 776 aa12.35□□□□□ -0.43
NOD1-201ENST00000222823 NAALADL2Q58DX5 795 aa12.35□□□□□ -0.43
NOD1-201ENST00000222823 SH2D4BQ5SQS7 431 aa12.35□□□□□ -0.43
NOD1-201ENST00000222823 TRIM42Q8IWZ5 723 aa12.35□□□□□ -0.43
NOD1-201ENST00000222823 ZMYND12Q9H0C1 365 aa12.35□□□□□ -0.43
NOD1-201ENST00000222823 SUGT1Q9Y2Z0 365 aa12.35□□□□□ -0.43
NOD1-201ENST00000222823 PODXLO00592 558 aa12.35□□□□□ -0.43
NOD1-201ENST00000222823 ZBED1O96006 694 aa12.35□□□□□ -0.43
NOD1-201ENST00000222823 ZNF18P17022 549 aa12.35□□□□□ -0.43
NOD1-201ENST00000222823 DBN1Q16643 649 aa12.35□□□□□ -0.43
NOD1-201ENST00000222823 GLE1Q53GS7 698 aaKnown RBP12.35□□□□□ -0.43
NOD1-201ENST00000222823 OR6B3Q8NGW1 331 aa12.35□□□□□ -0.43
NOD1-201ENST00000222823 HDAC11Q96DB2 347 aa12.35□□□□□ -0.43
NOD1-201ENST00000222823 CNOT10Q9H9A5 744 aaKnown RBP12.35□□□□□ -0.43
NOD1-201ENST00000222823 FAM205CA6NFA0 338 aa12.35□□□□□ -0.43
NOD1-201ENST00000222823 SFNP31947 248 aa12.35□□□□□ -0.43
NOD1-201ENST00000222823 GPC5P78333 572 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms