RNA–Protein interactions for RNA: YDL061C

RPS29B, Transcript of Protein component of the small (40S) ribosomal subunit, yeast

Gene RPS29B, Length 171 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS29B	YDL061C	PGK1	P00560	416 aa	Known RBP	3.18	□□□□□ -1.9
RPS29B	YDL061C	MRP1	P10662	321 aa	Known RBP	3.18	□□□□□ -1.9
RPS29B	YDL061C	FAR1	P21268	830 aa		3.18	□□□□□ -1.9
RPS29B	YDL061C	VPS1	P21576	704 aa	Known RBP	3.18	□□□□□ -1.9
RPS29B	YDL061C	DAL82	P21705	255 aa		3.18	□□□□□ -1.9
RPS29B	YDL061C	PUT3	P25502	979 aa	Predicted RBP	3.18	□□□□□ -1.9
RPS29B	YDL061C	KRE6	P32486	720 aa		3.18	□□□□□ -1.9
RPS29B	YDL061C	ZUO1	P32527	433 aa	Known RBP	3.18	□□□□□ -1.9
RPS29B	YDL061C	RAD5	P32849	1169 aa	Predicted RBP	3.18	□□□□□ -1.9
RPS29B	YDL061C	PRS1	P32895	427 aa	Known RBP	3.18	□□□□□ -1.9
RPS29B	YDL061C	SIP2	P34164	415 aa	Known RBP	3.18	□□□□□ -1.9
RPS29B	YDL061C	YKL162C	P36052	402 aa		3.18	□□□□□ -1.9
RPS29B	YDL061C	SWD2	P36104	329 aa	Predicted RBP	3.18	□□□□□ -1.9
RPS29B	YDL061C	CHK1	P38147	527 aa		3.18	□□□□□ -1.9
RPS29B	YDL061C	SIP3	P38717	1229 aa		3.18	□□□□□ -1.9
RPS29B	YDL061C	GEP4	P38812	185 aa		3.18	□□□□□ -1.9
RPS29B	YDL061C	PRM9	P39551	298 aa		3.18	□□□□□ -1.9
RPS29B	YDL061C	DSE1	P40077	573 aa		3.18	□□□□□ -1.9
RPS29B	YDL061C	ALG8	P40351	577 aa		3.18	□□□□□ -1.9
RPS29B	YDL061C	SIM1	P40472	476 aa		3.18	□□□□□ -1.9
RPS29B	YDL061C	AIM24	P47127	394 aa		3.18	□□□□□ -1.9
RPS29B	YDL061C	TOS2	P50078	622 aa		3.18	□□□□□ -1.9
RPS29B	YDL061C	BIO4	P53630	237 aa		3.18	□□□□□ -1.9
RPS29B	YDL061C	CAF40	P53829	373 aa		3.18	□□□□□ -1.9
RPS29B	YDL061C	IBD2	P53892	351 aa		3.18	□□□□□ -1.9
RPS29B	YDL061C	CCE1	Q03702	353 aa		3.18	□□□□□ -1.9
RPS29B	YDL061C	PRM6	Q04705	352 aa		3.18	□□□□□ -1.9
RPS29B	YDL061C	YMR254C	Q04838	102 aa		3.18	□□□□□ -1.9
RPS29B	YDL061C	COX20	Q04935	205 aa		3.18	□□□□□ -1.9
RPS29B	YDL061C	BCH1	Q05029	724 aa		3.18	□□□□□ -1.9
RPS29B	YDL061C	SSQ1	Q05931	657 aa	Predicted RBP	3.18	□□□□□ -1.9
RPS29B	YDL061C	CTS2	Q06350	511 aa		3.18	□□□□□ -1.9
RPS29B	YDL061C	LOT6	Q07923	191 aa		3.18	□□□□□ -1.9
RPS29B	YDL061C	RGT2	Q12300	763 aa		3.18	□□□□□ -1.9
RPS29B	YDL061C	RAD1	P06777	1100 aa		3.17	□□□□□ -1.9
RPS29B	YDL061C	POL30	P15873	258 aa	Known RBP	3.17	□□□□□ -1.9
RPS29B	YDL061C	YAP1	P19880	650 aa	Known RBP	3.17	□□□□□ -1.9
RPS29B	YDL061C	UTR1	P21373	530 aa		3.17	□□□□□ -1.9
RPS29B	YDL061C	RRT12	P25381	491 aa		3.17	□□□□□ -1.9
RPS29B	YDL061C	POP5	P28005	173 aa		3.17	□□□□□ -1.9
RPS29B	YDL061C	TMT1	P32643	299 aa		3.17	□□□□□ -1.9
RPS29B	YDL061C	PPZ2	P33329	710 aa		3.17	□□□□□ -1.9
RPS29B	YDL061C	TIR2	P33890	251 aa		3.17	□□□□□ -1.9
RPS29B	YDL061C	COS9	P36034	407 aa		3.17	□□□□□ -1.9
RPS29B	YDL061C	AIM29	P36154	155 aa		3.17	□□□□□ -1.9
RPS29B	YDL061C	YHR035W	P38769	630 aa		3.17	□□□□□ -1.9
RPS29B	YDL061C	AZF1	P41696	914 aa		3.17	□□□□□ -1.9
RPS29B	YDL061C	AGP3	P43548	558 aa		3.17	□□□□□ -1.9
RPS29B	YDL061C	TRF5	P48561	642 aa	Known RBP	3.17	□□□□□ -1.9
RPS29B	YDL061C	SEH1	P53011	349 aa	Known RBP	3.17	□□□□□ -1.9
RPS29B	YDL061C	TIM21	P53220	239 aa		3.17	□□□□□ -1.9
RPS29B	YDL061C	ESBP6	P53918	673 aa		3.17	□□□□□ -1.9
RPS29B	YDL061C	ALG11	P53954	548 aa	Known RBP	3.17	□□□□□ -1.9
RPS29B	YDL061C	YPL077C	Q02831	240 aa		3.17	□□□□□ -1.9
RPS29B	YDL061C	MRPS17	Q03246	237 aa	Predicted RBP	3.17	□□□□□ -1.9
RPS29B	YDL061C	YMR010W	Q03687	405 aa		3.17	□□□□□ -1.9
RPS29B	YDL061C	KRE28	Q04431	385 aa		3.17	□□□□□ -1.9
RPS29B	YDL061C	PAM18	Q07914	168 aa		3.17	□□□□□ -1.9
RPS29B	YDL061C	BSC6	Q08280	497 aa		3.17	□□□□□ -1.9
RPS29B	YDL061C	YLR108C	Q12259	485 aa		3.17	□□□□□ -1.9
RPS29B	YDL061C	ERP3	Q12403	225 aa		3.17	□□□□□ -1.9
RPS29B	YDL061C	ATG31	Q12421	196 aa		3.17	□□□□□ -1.9
RPS29B	YDL061C	HTZ1	Q12692	134 aa	Known RBP	3.17	□□□□□ -1.9
RPS29B	YDL061C	IZH4	Q99393	312 aa		3.17	□□□□□ -1.9
RPS29B	YDL061C	ATP6	P00854	259 aa		3.16	□□□□□ -1.9
RPS29B	YDL061C	ATR1	P13090	542 aa		3.16	□□□□□ -1.9
RPS29B	YDL061C	CAP2	P13517	287 aa		3.16	□□□□□ -1.9
RPS29B	YDL061C	MTF1	P14908	341 aa	Known RBP	3.16	□□□□□ -1.9
RPS29B	YDL061C	AIM17	P23180	465 aa	Known RBP	3.16	□□□□□ -1.9
RPS29B	YDL061C	EXG1	P23776	448 aa	Known RBP	3.16	□□□□□ -1.9
RPS29B	YDL061C	CWP1	P28319	239 aa		3.16	□□□□□ -1.9
RPS29B	YDL061C	MKK1	P32490	508 aa		3.16	□□□□□ -1.9
RPS29B	YDL061C	NUP2	P32499	720 aa		3.16	□□□□□ -1.9
RPS29B	YDL061C	IMP3	P32899	183 aa	Predicted RBP	3.16	□□□□□ -1.9
RPS29B	YDL061C	PTR2	P32901	601 aa		3.16	□□□□□ -1.9
RPS29B	YDL061C	YKL097C	P34245	136 aa		3.16	□□□□□ -1.9
RPS29B	YDL061C	YHK8	P38776	514 aa		3.16	□□□□□ -1.9
RPS29B	YDL061C	SBE22	P38814	852 aa		3.16	□□□□□ -1.9
RPS29B	YDL061C	ATG7	P38862	630 aa		3.16	□□□□□ -1.9
RPS29B	YDL061C	COX14	P39103	70 aa		3.16	□□□□□ -1.9
RPS29B	YDL061C	HAT2	P39984	401 aa		3.16	□□□□□ -1.9
RPS29B	YDL061C	BIO3	P50277	480 aa		3.16	□□□□□ -1.9
RPS29B	YDL061C	AVT4	P50944	713 aa		3.16	□□□□□ -1.9
RPS29B	YDL061C	SLI1	P53304	468 aa		3.16	□□□□□ -1.9
RPS29B	YDL061C	HXT11	P54862	567 aa		3.16	□□□□□ -1.9
RPS29B	YDL061C	STP1	Q00947	519 aa		3.16	□□□□□ -1.9
RPS29B	YDL061C	SED5	Q01590	340 aa		3.16	□□□□□ -1.9
RPS29B	YDL061C	IRC4	Q03036	179 aa		3.16	□□□□□ -1.9
RPS29B	YDL061C	BNA7	Q04066	261 aa		3.16	□□□□□ -1.9
RPS29B	YDL061C	YPQ1	Q12010	308 aa		3.16	□□□□□ -1.9
RPS29B	YDL061C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	3.15	□□□□□ -1.91	not detected
RPS29B	YDL061C	SSC1	P0CS90	654 aa	Known RBP	3.15	□□□□□ -1.91
RPS29B	YDL061C	HPR1	P17629	752 aa	Known RBP	3.15	□□□□□ -1.91
RPS29B	YDL061C	MET16	P18408	261 aa	Predicted RBP	3.15	□□□□□ -1.91
RPS29B	YDL061C	SAM2	P19358	384 aa	Known RBP	3.15	□□□□□ -1.91
RPS29B	YDL061C	RPL24B	P24000	155 aa	Known RBP	3.15	□□□□□ -1.91
RPS29B	YDL061C	KAR9	P32526	644 aa		3.15	□□□□□ -1.91
RPS29B	YDL061C	ZRT1	P32804	376 aa		3.15	□□□□□ -1.91
RPS29B	YDL061C	PRS4	P38063	326 aa	Predicted RBP	3.15	□□□□□ -1.91
RPS29B	YDL061C	GPX2	P38143	162 aa		3.15	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms