RNA–Protein interactions for RNA: ENST00000638573.1

COLCA2-206, Transcript of colorectal cancer associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COLCA2, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-206ENST00000638573 BBXQ8WY36 941 aaPredicted RBP18.5■□□□□ 0.55
COLCA2-206ENST00000638573 ZNF689Q96CS4 500 aaPredicted RBP18.5■□□□□ 0.55
COLCA2-206ENST00000638573 TEKT3Q9BXF9 490 aa18.5■□□□□ 0.55
COLCA2-206ENST00000638573 MRPL42Q9Y6G3 142 aaKnown RBP18.5■□□□□ 0.55
COLCA2-206ENST00000638573 COL1A2P08123 1366 aa18.5■□□□□ 0.55
COLCA2-206ENST00000638573 KDM3AQ9Y4C1 1321 aa18.49■□□□□ 0.55
COLCA2-206ENST00000638573 CYP3A7-CYP3A51PA0A087WV96 503 aa18.49■□□□□ 0.55
COLCA2-206ENST00000638573 WNT7AO00755 349 aa18.49■□□□□ 0.55
COLCA2-206ENST00000638573 GRM6O15303 877 aa18.49■□□□□ 0.55
COLCA2-206ENST00000638573 DGKIO75912 1065 aa18.49■□□□□ 0.55
COLCA2-206ENST00000638573 STBD1O95210 358 aa18.49■□□□□ 0.55
COLCA2-206ENST00000638573 FGFR4P22455 802 aa18.49■□□□□ 0.55
COLCA2-206ENST00000638573 CYP3A7P24462 503 aa18.49■□□□□ 0.55
COLCA2-206ENST00000638573 NR5A1Q13285 461 aa18.49■□□□□ 0.55
COLCA2-206ENST00000638573 GNL2Q13823 731 aaKnown RBP18.49■□□□□ 0.55
COLCA2-206ENST00000638573 B3GNT9Q6UX72 402 aa18.49■□□□□ 0.55
COLCA2-206ENST00000638573 PIK3AP1Q6ZUJ8 805 aa18.49■□□□□ 0.55
COLCA2-206ENST00000638573 DIS3L2Q8IYB7 885 aaKnown RBP18.49■□□□□ 0.55
COLCA2-206ENST00000638573 LINC01465Q8N7H1 131 aa18.49■□□□□ 0.55
COLCA2-206ENST00000638573 BANK1Q8NDB2 785 aa18.49■□□□□ 0.55
COLCA2-206ENST00000638573 SNX21Q969T3 373 aa18.49■□□□□ 0.55
COLCA2-206ENST00000638573 MBOAT7Q96N66 472 aa18.49■□□□□ 0.55
COLCA2-206ENST00000638573 UHRF1Q96T88 793 aaPredicted RBP18.49■□□□□ 0.55
COLCA2-206ENST00000638573 RIT2Q99578 217 aa18.49■□□□□ 0.55
COLCA2-206ENST00000638573 TSPYL2Q9H2G4 693 aaPredicted RBP18.49■□□□□ 0.55
COLCA2-206ENST00000638573 XIRP2A4UGR9 3374 aa18.49■□□□□ 0.55
COLCA2-206ENST00000638573 H3BNC9 293 aa18.48■□□□□ 0.55
COLCA2-206ENST00000638573 CSDE1O75534 798 aaKnown RBP18.48■□□□□ 0.55
COLCA2-206ENST00000638573 GJB2P29033 226 aa18.48■□□□□ 0.55
COLCA2-206ENST00000638573 GUCY1B3Q02153 619 aa18.48■□□□□ 0.55
COLCA2-206ENST00000638573 BTG3Q14201 252 aaPredicted RBP18.48■□□□□ 0.55
COLCA2-206ENST00000638573 TCEAL5Q5H9L2 206 aa18.48■□□□□ 0.55
COLCA2-206ENST00000638573 EFCAB12Q6NXP0 572 aa18.48■□□□□ 0.55
COLCA2-206ENST00000638573 MIER3Q7Z3K6 550 aa18.48■□□□□ 0.55
COLCA2-206ENST00000638573 SYMPKQ92797 1274 aaKnown RBP18.48■□□□□ 0.55
COLCA2-206ENST00000638573 HLA-CQ95604 372 aa18.48■□□□□ 0.55
COLCA2-206ENST00000638573 WRAP73Q9P2S5 460 aaPredicted RBP18.48■□□□□ 0.55
COLCA2-206ENST00000638573 DDX25Q9UHL0 483 aaKnown RBP18.48■□□□□ 0.55
COLCA2-206ENST00000638573 ST3GAL5Q9UNP4 418 aa18.48■□□□□ 0.55
COLCA2-206ENST00000638573 RPS6KA5O75582 802 aa18.47■□□□□ 0.55
COLCA2-206ENST00000638573 NLRP11P59045 1033 aaKnown RBP18.47■□□□□ 0.55
COLCA2-206ENST00000638573 CUL4AQ13619 759 aa18.47■□□□□ 0.55
COLCA2-206ENST00000638573 MTERF2Q49AM1 385 aa18.47■□□□□ 0.55
COLCA2-206ENST00000638573 PLA2G4FQ68DD2 849 aa18.47■□□□□ 0.55
COLCA2-206ENST00000638573 NME8Q8N427 588 aa18.47■□□□□ 0.55
COLCA2-206ENST00000638573 ZNF579Q8NAF0 562 aaKnown RBP18.47■□□□□ 0.55
COLCA2-206ENST00000638573 FBXO18Q8NFZ0 1043 aa18.47■□□□□ 0.55
COLCA2-206ENST00000638573 TNPO1Q92973 898 aaKnown RBP18.47■□□□□ 0.55
COLCA2-206ENST00000638573 MRPL38Q96DV4 380 aaKnown RBP18.47■□□□□ 0.55
COLCA2-206ENST00000638573 CEP89Q96ST8 783 aa18.47■□□□□ 0.55
COLCA2-206ENST00000638573 ADAM2Q99965 735 aa18.47■□□□□ 0.55
COLCA2-206ENST00000638573 ADAMTS10Q9H324 1103 aa18.47■□□□□ 0.55
COLCA2-206ENST00000638573 AKT3Q9Y243 479 aa18.47■□□□□ 0.55
COLCA2-206ENST00000638573 PCDHGC5Q9Y5F6 944 aa18.47■□□□□ 0.55
COLCA2-206ENST00000638573 TCF20Q9UGU0 1960 aaKnown RBP18.46■□□□□ 0.55
COLCA2-206ENST00000638573 H3BQV1 296 aa18.46■□□□□ 0.55
COLCA2-206ENST00000638573 DNAJB1P25685 340 aa18.46■□□□□ 0.55
COLCA2-206ENST00000638573 GTF2F1P35269 517 aaKnown RBP eCLIP18.46■□□□□ 0.554e-7■■■□□ 18.3
COLCA2-206ENST00000638573 BMPR1AP36894 532 aa18.46■□□□□ 0.55
COLCA2-206ENST00000638573 TARBP2Q15633 366 aaKnown RBP18.46■□□□□ 0.55
COLCA2-206ENST00000638573 FAM102BQ5T8I3 360 aa18.46■□□□□ 0.55
COLCA2-206ENST00000638573 NEK8Q86SG6 692 aa18.46■□□□□ 0.55
COLCA2-206ENST00000638573 POTEDQ86YR6 584 aa18.46■□□□□ 0.55
COLCA2-206ENST00000638573 NPAS4Q8IUM7 802 aa18.46■□□□□ 0.55
COLCA2-206ENST00000638573 NAP1L4Q99733 375 aaKnown RBP18.46■□□□□ 0.55
COLCA2-206ENST00000638573 UBE2ZQ9H832 354 aaPredicted RBP18.46■□□□□ 0.55
COLCA2-206ENST00000638573 ALG13Q9NP73 1137 aaKnown RBP18.46■□□□□ 0.55
COLCA2-206ENST00000638573 LMCD1Q9NZU5 365 aa18.46■□□□□ 0.55
COLCA2-206ENST00000638573 SEPT9Q9UHD8 586 aaPredicted RBP18.46■□□□□ 0.55
COLCA2-206ENST00000638573 VAV3Q9UKW4 847 aa18.46■□□□□ 0.55
COLCA2-206ENST00000638573 SQORQ9Y6N5 450 aa18.46■□□□□ 0.55
COLCA2-206ENST00000638573 BTBD18B2RXH4 712 aa18.45■□□□□ 0.54
COLCA2-206ENST00000638573 TNFRSF10AO00220 468 aa18.45■□□□□ 0.54
COLCA2-206ENST00000638573 HSP90AA1P07900 732 aaKnown RBP18.45■□□□□ 0.54
COLCA2-206ENST00000638573 FGFR1P11362 822 aa18.45■□□□□ 0.54
COLCA2-206ENST00000638573 KCNA5P22460 613 aa18.45■□□□□ 0.54
COLCA2-206ENST00000638573 JAK3P52333 1124 aa18.45■□□□□ 0.54
COLCA2-206ENST00000638573 CRYBB1P53674 252 aaPredicted RBP18.45■□□□□ 0.54
COLCA2-206ENST00000638573 CAMK1Q14012 370 aa18.45■□□□□ 0.54
COLCA2-206ENST00000638573 HAS1Q92839 578 aa18.45■□□□□ 0.54
COLCA2-206ENST00000638573 TNFRSF25Q93038 417 aa18.45■□□□□ 0.54
COLCA2-206ENST00000638573 INTS4Q96HW7 963 aaKnown RBP18.45■□□□□ 0.54
COLCA2-206ENST00000638573 BMP2KQ9NSY1 1161 aaPredicted RBP18.45■□□□□ 0.54
COLCA2-206ENST00000638573 TTC3P53804 2025 aa18.45■□□□□ 0.54
COLCA2-206ENST00000638573 C9IYK1 514 aa18.44■□□□□ 0.54
COLCA2-206ENST00000638573 H3BQ06 376 aaPredicted RBP18.44■□□□□ 0.54
COLCA2-206ENST00000638573 CCNT1O60563 726 aaKnown RBP18.44■□□□□ 0.54
COLCA2-206ENST00000638573 SARSP49591 514 aaKnown RBP18.44■□□□□ 0.54
COLCA2-206ENST00000638573 DSC3Q14574 896 aa18.44■□□□□ 0.54
COLCA2-206ENST00000638573 MOXD1Q6UVY6 613 aa18.44■□□□□ 0.54
COLCA2-206ENST00000638573 KHSRPQ92945 711 aaKnown RBP eCLIP18.44■□□□□ 0.54
COLCA2-206ENST00000638573 CLP1Q92989 425 aaKnown RBP18.44■□□□□ 0.54
COLCA2-206ENST00000638573 FAM167AQ96KS9 214 aa18.44■□□□□ 0.54
COLCA2-206ENST00000638573 SAMD11Q96NU1 681 aa18.44■□□□□ 0.54
COLCA2-206ENST00000638573 FTHL17Q9BXU8 183 aa18.44■□□□□ 0.54
COLCA2-206ENST00000638573 FOXP1Q9H334 677 aaPredicted RBP18.44■□□□□ 0.54
COLCA2-206ENST00000638573 KCNMB3Q9NPA1 279 aa18.44■□□□□ 0.54
COLCA2-206ENST00000638573 LOXHD1Q8IVV2 1947 aa18.44■□□□□ 0.54
COLCA2-206ENST00000638573 DENND3A2RUS2 1198 aa18.43■□□□□ 0.54
COLCA2-206ENST00000638573 DDX11L8A8MPP1 907 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms