RNA–Protein interactions for RNA: ENST00000625891.2

NRXN1-223, Transcript of neurexin 1, human

TSL 4 BASIC

Gene NRXN1, Length 1,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-223	ENST00000625891	SPTLC3	Q9NUV7	552 aa		7.76	□□□□□ -1.17
NRXN1-223	ENST00000625891	BTBD7	Q9P203	1132 aa		7.76	□□□□□ -1.17
NRXN1-223	ENST00000625891	RBPJL	Q9UBG7	517 aa		7.76	□□□□□ -1.17
NRXN1-223	ENST00000625891	ATP8A1	Q9Y2Q0	1164 aa		7.76	□□□□□ -1.17
NRXN1-223	ENST00000625891	CTTNBP2	Q8WZ74	1663 aa		7.76	□□□□□ -1.17
NRXN1-223	ENST00000625891	HIP1R	O75146	1068 aa		7.75	□□□□□ -1.17
NRXN1-223	ENST00000625891	SLC9A1	P19634	815 aa		7.75	□□□□□ -1.17
NRXN1-223	ENST00000625891	AOAH	P28039	575 aa		7.75	□□□□□ -1.17
NRXN1-223	ENST00000625891	KIF11	P52732	1056 aa		7.75	□□□□□ -1.17
NRXN1-223	ENST00000625891	DBP	Q10586	325 aa	Predicted RBP	7.75	□□□□□ -1.17
NRXN1-223	ENST00000625891	CD276	Q5ZPR3	534 aa		7.75	□□□□□ -1.17
NRXN1-223	ENST00000625891	CD300LD	Q6UXZ3	194 aa		7.75	□□□□□ -1.17
NRXN1-223	ENST00000625891	GPR101	Q96P66	508 aa	Predicted RBP	7.75	□□□□□ -1.17
NRXN1-223	ENST00000625891	ELF4	Q99607	663 aa	Predicted RBP	7.75	□□□□□ -1.17
NRXN1-223	ENST00000625891	TTC1	Q99614	292 aa		7.75	□□□□□ -1.17
NRXN1-223	ENST00000625891	YIPF4	Q9BSR8	244 aa		7.75	□□□□□ -1.17
NRXN1-223	ENST00000625891	EMC7	Q9NPA0	242 aa		7.75	□□□□□ -1.17
NRXN1-223	ENST00000625891	RAPGEF2	Q9Y4G8	1499 aa		7.75	□□□□□ -1.17
NRXN1-223	ENST00000625891	BRINP1	O60477	761 aa		7.74	□□□□□ -1.17
NRXN1-223	ENST00000625891	ITGB3	P05106	788 aa		7.74	□□□□□ -1.17
NRXN1-223	ENST00000625891	CNR2	P34972	360 aa		7.74	□□□□□ -1.17
NRXN1-223	ENST00000625891	CDKN1C	P49918	316 aa	Predicted RBP	7.74	□□□□□ -1.17
NRXN1-223	ENST00000625891	IL2	P60568	153 aa		7.74	□□□□□ -1.17
NRXN1-223	ENST00000625891	NKX3-2	P78367	333 aa		7.74	□□□□□ -1.17
NRXN1-223	ENST00000625891	STAT4	Q14765	748 aa		7.74	□□□□□ -1.17
NRXN1-223	ENST00000625891	ZC3H18	Q86VM9	953 aa	Known RBP	7.74	□□□□□ -1.17
NRXN1-223	ENST00000625891	RPUSD2	Q8IZ73	545 aa	Known RBP	7.74	□□□□□ -1.17
NRXN1-223	ENST00000625891	CARF	Q8N187	725 aa		7.74	□□□□□ -1.17
NRXN1-223	ENST00000625891	ASB15	Q8WXK1	588 aa		7.74	□□□□□ -1.17
NRXN1-223	ENST00000625891	USP7	Q93009	1102 aa		7.74	□□□□□ -1.17
NRXN1-223	ENST00000625891	GORASP1	Q9BQQ3	440 aa		7.74	□□□□□ -1.17
NRXN1-223	ENST00000625891	ACSS2	Q9NR19	701 aa		7.74	□□□□□ -1.17
NRXN1-223	ENST00000625891	TYW1	Q9NV66	732 aa	Known RBP	7.74	□□□□□ -1.17
NRXN1-223	ENST00000625891	ABCA8	O94911	1581 aa		7.73	□□□□□ -1.17
NRXN1-223	ENST00000625891	PRAMEF25	A6NGN4	478 aa		7.73	□□□□□ -1.17
NRXN1-223	ENST00000625891	FOXP2	O15409	715 aa		7.73	□□□□□ -1.17
NRXN1-223	ENST00000625891	MME	P08473	750 aa		7.73	□□□□□ -1.17
NRXN1-223	ENST00000625891	CYP2C8	P10632	490 aa		7.73	□□□□□ -1.17
NRXN1-223	ENST00000625891	TNFRSF1A	P19438	455 aa		7.73	□□□□□ -1.17
NRXN1-223	ENST00000625891	PTX3	P26022	381 aa	Predicted RBP	7.73	□□□□□ -1.17
NRXN1-223	ENST00000625891	FNTB	P49356	437 aa		7.73	□□□□□ -1.17
NRXN1-223	ENST00000625891	KPNA1	P52294	538 aa	Predicted RBP	7.73	□□□□□ -1.17
NRXN1-223	ENST00000625891	ITGA1	P56199	1179 aa		7.73	□□□□□ -1.17
NRXN1-223	ENST00000625891	ADAM17	P78536	824 aa		7.73	□□□□□ -1.17
NRXN1-223	ENST00000625891	SMAD3	P84022	425 aa	Known RBP	7.73	□□□□□ -1.17
NRXN1-223	ENST00000625891	TMEM132B	Q14DG7	1078 aa		7.73	□□□□□ -1.17
NRXN1-223	ENST00000625891	SART3	Q15020	963 aa	Known RBP	7.73	□□□□□ -1.17
NRXN1-223	ENST00000625891	SMAD2	Q15796	467 aa	Known RBP	7.73	□□□□□ -1.17
NRXN1-223	ENST00000625891	ESRP1	Q6NXG1	681 aa	Known RBP	7.73	□□□□□ -1.17
NRXN1-223	ENST00000625891	LINC00482	Q8N8I6	264 aa		7.73	□□□□□ -1.17
NRXN1-223	ENST00000625891	DDX11	Q96FC9	970 aa		7.73	□□□□□ -1.17
NRXN1-223	ENST00000625891	C16orf92	Q96LL3	132 aa		7.73	□□□□□ -1.17
NRXN1-223	ENST00000625891	NOX5	Q96PH1	765 aa		7.73	□□□□□ -1.17
NRXN1-223	ENST00000625891	RBM15	Q96T37	977 aa	Known RBP eCLIP	7.73	□□□□□ -1.17
NRXN1-223	ENST00000625891	APOBEC2	Q9Y235	224 aa	Known RBP	7.73	□□□□□ -1.17
NRXN1-223	ENST00000625891	KIF21B	O75037	1637 aa		7.73	□□□□□ -1.17
NRXN1-223	ENST00000625891	PHLDB1	Q86UU1	1377 aa		7.72	□□□□□ -1.17
NRXN1-223	ENST00000625891	HECW2	Q9P2P5	1572 aa		7.72	□□□□□ -1.17
NRXN1-223	ENST00000625891	ZNF839	A8K0R7	811 aa		7.72	□□□□□ -1.17
NRXN1-223	ENST00000625891	GPR39	O43194	453 aa		7.72	□□□□□ -1.17
NRXN1-223	ENST00000625891	AKAP8	O43823	692 aa	Known RBP	7.72	□□□□□ -1.17
NRXN1-223	ENST00000625891	MARCH6	O60337	910 aa		7.72	□□□□□ -1.17
NRXN1-223	ENST00000625891	MPIG6B	O95866	241 aa		7.72	□□□□□ -1.17
NRXN1-223	ENST00000625891	OCRL	Q01968	901 aa		7.72	□□□□□ -1.17
NRXN1-223	ENST00000625891	ADAM9	Q13443	819 aa		7.72	□□□□□ -1.17
NRXN1-223	ENST00000625891	ZNF174	Q15697	407 aa		7.72	□□□□□ -1.17
NRXN1-223	ENST00000625891	RTN4RL1	Q86UN2	441 aa	Predicted RBP	7.72	□□□□□ -1.17
NRXN1-223	ENST00000625891	DTX3	Q8N9I9	347 aa		7.72	□□□□□ -1.17
NRXN1-223	ENST00000625891	FOXRED1	Q96CU9	486 aa	Predicted RBP	7.72	□□□□□ -1.17
NRXN1-223	ENST00000625891	PCIF1	Q9H4Z3	704 aa		7.72	□□□□□ -1.17
NRXN1-223	ENST00000625891	ZMAT4	Q9H898	229 aa		7.72	□□□□□ -1.17
NRXN1-223	ENST00000625891	SMPD4	Q9NXE4	827 aa		7.72	□□□□□ -1.17
NRXN1-223	ENST00000625891	CYP17A1	P05093	508 aa		7.71	□□□□□ -1.18
NRXN1-223	ENST00000625891	CPE	P16870	476 aa		7.71	□□□□□ -1.18
NRXN1-223	ENST00000625891	GJA9	P57773	515 aa		7.71	□□□□□ -1.18
NRXN1-223	ENST00000625891	PHC1	P78364	1004 aa		7.71	□□□□□ -1.18
NRXN1-223	ENST00000625891	PFKP	Q01813	784 aa		7.71	□□□□□ -1.18
NRXN1-223	ENST00000625891	GPR158	Q5T848	1215 aa		7.71	□□□□□ -1.18
NRXN1-223	ENST00000625891	TMC5	Q6UXY8	1006 aa		7.71	□□□□□ -1.18
NRXN1-223	ENST00000625891	PRPF38A	Q8NAV1	312 aa	Known RBP	7.71	□□□□□ -1.18
NRXN1-223	ENST00000625891	C11orf84	Q9BUA3	381 aa	Predicted RBP	7.71	□□□□□ -1.18
NRXN1-223	ENST00000625891	PCDH18	Q9HCL0	1135 aa		7.71	□□□□□ -1.18
NRXN1-223	ENST00000625891	MCM8	Q9UJA3	840 aa		7.71	□□□□□ -1.18
NRXN1-223	ENST00000625891	ASB1	Q9Y576	335 aa		7.71	□□□□□ -1.18
NRXN1-223	ENST00000625891	WDR7	Q9Y4E6	1490 aa		7.7	□□□□□ -1.18
NRXN1-223	ENST00000625891	GOLGA6L22	H0YM25	854 aa		7.7	□□□□□ -1.18
NRXN1-223	ENST00000625891	ENO2	P09104	434 aa	Predicted RBP	7.7	□□□□□ -1.18
NRXN1-223	ENST00000625891	MC4R	P32245	332 aa		7.7	□□□□□ -1.18
NRXN1-223	ENST00000625891	ZXDA	P98168	799 aa		7.7	□□□□□ -1.18
NRXN1-223	ENST00000625891	EPHA7	Q15375	998 aa		7.7	□□□□□ -1.18
NRXN1-223	ENST00000625891	TERF2	Q15554	542 aa		7.7	□□□□□ -1.18
NRXN1-223	ENST00000625891	ATP13A4	Q4VNC1	1196 aa		7.7	□□□□□ -1.18
NRXN1-223	ENST00000625891	VASN	Q6EMK4	673 aa		7.7	□□□□□ -1.18
NRXN1-223	ENST00000625891	WDR66	Q8TBY9	1149 aa		7.7	□□□□□ -1.18
NRXN1-223	ENST00000625891	SCYL1	Q96KG9	808 aa		7.7	□□□□□ -1.18
NRXN1-223	ENST00000625891	GBP4	Q96PP9	640 aa		7.7	□□□□□ -1.18
NRXN1-223	ENST00000625891	SLC39A2	Q9NP94	309 aa		7.7	□□□□□ -1.18
NRXN1-223	ENST00000625891	SIGLEC1	Q9BZZ2	1709 aa		7.69	□□□□□ -1.18
NRXN1-223	ENST00000625891	PRX	Q9BXM0	1461 aa		7.69	□□□□□ -1.18
NRXN1-223	ENST00000625891	MATN3	O15232	486 aa		7.69	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms