RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 TRIM65Q6PJ69 517 aa10.9□□□□□ -0.67
VTA1-205ENST00000620996 EPM2AIP1Q7L775 607 aaPredicted RBP10.9□□□□□ -0.67
VTA1-205ENST00000620996 ZNF720Q7Z2F6 126 aa10.9□□□□□ -0.67
VTA1-205ENST00000620996 FAM186BQ8IYM0 893 aa10.9□□□□□ -0.67
VTA1-205ENST00000620996 DNAJC7Q99615 494 aa10.9□□□□□ -0.67
VTA1-205ENST00000620996 KIFC3Q9BVG8 833 aa10.9□□□□□ -0.67
VTA1-205ENST00000620996 GBP3Q9H0R5 595 aa10.9□□□□□ -0.67
VTA1-205ENST00000620996 TRIM10Q9UDY6 481 aa10.9□□□□□ -0.67
VTA1-205ENST00000620996 SIK3Q9Y2K2 1263 aa10.9□□□□□ -0.67
VTA1-205ENST00000620996 PSAPP07602 524 aa10.89□□□□□ -0.67
VTA1-205ENST00000620996 POTEJP0CG39 1038 aa10.89□□□□□ -0.67
VTA1-205ENST00000620996 ACTN1P12814 892 aa10.89□□□□□ -0.67
VTA1-205ENST00000620996 CAPN2P17655 700 aa10.89□□□□□ -0.67
VTA1-205ENST00000620996 MUTP22033 750 aa10.89□□□□□ -0.67
VTA1-205ENST00000620996 SPA17Q15506 151 aa10.89□□□□□ -0.67
VTA1-205ENST00000620996 LBX2Q6XYB7 198 aa10.89□□□□□ -0.67
VTA1-205ENST00000620996 TRIM59Q8IWR1 403 aa10.89□□□□□ -0.67
VTA1-205ENST00000620996 CHST13Q8NET6 341 aa10.89□□□□□ -0.67
VTA1-205ENST00000620996 SLC10A4Q96EP9 437 aa10.89□□□□□ -0.67
VTA1-205ENST00000620996 FRMD4BQ9Y2L6 1034 aa10.89□□□□□ -0.67
VTA1-205ENST00000620996 ABL1P00519 1130 aa10.89□□□□□ -0.67
VTA1-205ENST00000620996 AFPP02771 609 aaKnown RBP10.89□□□□□ -0.67
VTA1-205ENST00000620996 GUCY2CP25092 1073 aa10.89□□□□□ -0.67
VTA1-205ENST00000620996 MTERF2Q49AM1 385 aa10.89□□□□□ -0.67
VTA1-205ENST00000620996 XRRA1Q6P2D8 792 aa10.89□□□□□ -0.67
VTA1-205ENST00000620996 WDR59Q6PJI9 974 aa10.89□□□□□ -0.67
VTA1-205ENST00000620996 KCTD17Q8N5Z5 321 aa10.89□□□□□ -0.67
VTA1-205ENST00000620996 ATP6V0A1Q93050 837 aa10.89□□□□□ -0.67
VTA1-205ENST00000620996 CDHR1Q96JP9 859 aa10.89□□□□□ -0.67
VTA1-205ENST00000620996 INPP4AQ96PE3 977 aaPredicted RBP10.89□□□□□ -0.67
VTA1-205ENST00000620996 TAF1DQ9H5J8 278 aaPredicted RBP10.89□□□□□ -0.67
VTA1-205ENST00000620996 KCND2Q9NZV8 630 aa10.89□□□□□ -0.67
VTA1-205ENST00000620996 SEL1LQ9UBV2 794 aa10.89□□□□□ -0.67
VTA1-205ENST00000620996 TRAF3IP3Q9Y228 551 aa10.89□□□□□ -0.67
VTA1-205ENST00000620996 SBF1O95248 1867 aa10.89□□□□□ -0.67
VTA1-205ENST00000620996 COL11A1P12107 1806 aaPredicted RBP10.89□□□□□ -0.67
VTA1-205ENST00000620996 A0A0G2JLL6 359 aaPredicted RBP10.89□□□□□ -0.67
VTA1-205ENST00000620996 GLTPD2A6NH11 291 aa10.89□□□□□ -0.67
VTA1-205ENST00000620996 TISP43B9A030 160 aa10.89□□□□□ -0.67
VTA1-205ENST00000620996 RGS20O76081 388 aa10.89□□□□□ -0.67
VTA1-205ENST00000620996 SLU7O95391 586 aaKnown RBP10.89□□□□□ -0.67
VTA1-205ENST00000620996 ACTR2P61160 394 aa10.89□□□□□ -0.67
VTA1-205ENST00000620996 CCDC122Q5T0U0 273 aa10.89□□□□□ -0.67
VTA1-205ENST00000620996 PRRT2Q7Z6L0 340 aaPredicted RBP10.89□□□□□ -0.67
VTA1-205ENST00000620996 DAW1Q8N136 415 aa10.89□□□□□ -0.67
VTA1-205ENST00000620996 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.89□□□□□ -0.67
VTA1-205ENST00000620996 TTYH3Q9C0H2 523 aa10.89□□□□□ -0.67
VTA1-205ENST00000620996 FBXO40Q9UH90 709 aa10.89□□□□□ -0.67
VTA1-205ENST00000620996 FAM184BQ9ULE4 1060 aa10.89□□□□□ -0.67
VTA1-205ENST00000620996 PHLPP2Q6ZVD8 1323 aa10.88□□□□□ -0.67
VTA1-205ENST00000620996 MYPNQ86TC9 1320 aa10.88□□□□□ -0.67
VTA1-205ENST00000620996 DICER1Q9UPY3 1922 aaKnown RBP10.88□□□□□ -0.67
VTA1-205ENST00000620996 FAM170AA1A519 330 aa10.88□□□□□ -0.67
VTA1-205ENST00000620996 IQCA1LA6NCM1 817 aa10.88□□□□□ -0.67
VTA1-205ENST00000620996 SPDYE5A6NIY4 337 aa10.88□□□□□ -0.67
VTA1-205ENST00000620996 ATP2A1O14983 1001 aa10.88□□□□□ -0.67
VTA1-205ENST00000620996 EIF3DO15371 548 aaKnown RBP eCLIP10.88□□□□□ -0.67
VTA1-205ENST00000620996 TGFB1I1O43294 461 aa10.88□□□□□ -0.67
VTA1-205ENST00000620996 TRIM49P0CI25 452 aa10.88□□□□□ -0.67
VTA1-205ENST00000620996 TRIM49CP0CI26 452 aa10.88□□□□□ -0.67
VTA1-205ENST00000620996 KCNA2P16389 499 aa10.88□□□□□ -0.67
VTA1-205ENST00000620996 OSBPP22059 807 aa10.88□□□□□ -0.67
VTA1-205ENST00000620996 KCNMA1Q12791 1236 aa10.88□□□□□ -0.67
VTA1-205ENST00000620996 ZNF746Q6NUN9 644 aaPredicted RBP10.88□□□□□ -0.67
VTA1-205ENST00000620996 OTUD6AQ7L8S5 288 aa10.88□□□□□ -0.67
VTA1-205ENST00000620996 DRC1Q96MC2 740 aa10.88□□□□□ -0.67
VTA1-205ENST00000620996 SPAG5Q96R06 1193 aa10.88□□□□□ -0.67
VTA1-205ENST00000620996 R3HDMLQ9H3Y0 253 aa10.88□□□□□ -0.67
VTA1-205ENST00000620996 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.88□□□□□ -0.67
VTA1-205ENST00000620996 PSMC2P35998 433 aaKnown RBP10.88□□□□□ -0.67
VTA1-205ENST00000620996 EIF4A3P38919 411 aaKnown RBP10.88□□□□□ -0.67
VTA1-205ENST00000620996 ALDH5A1P51649 535 aaPredicted RBP10.88□□□□□ -0.67
VTA1-205ENST00000620996 FAM193AP78312 1265 aa10.88□□□□□ -0.67
VTA1-205ENST00000620996 PRKCEQ02156 737 aa10.88□□□□□ -0.67
VTA1-205ENST00000620996 MIS18BP1Q6P0N0 1132 aa10.88□□□□□ -0.67
VTA1-205ENST00000620996 C4orf19Q8IY42 314 aa10.88□□□□□ -0.67
VTA1-205ENST00000620996 SLC35F6Q8N357 371 aa10.88□□□□□ -0.67
VTA1-205ENST00000620996 PROCA1Q8NCQ7 364 aaPredicted RBP10.88□□□□□ -0.67
VTA1-205ENST00000620996 AGPAT3Q9NRZ7 376 aa10.88□□□□□ -0.67
VTA1-205ENST00000620996 DBR1Q9UK59 544 aaKnown RBP10.88□□□□□ -0.67
VTA1-205ENST00000620996 MACROD2A1Z1Q3 448 aa10.87□□□□□ -0.67
VTA1-205ENST00000620996 TUBB4AP04350 444 aa10.87□□□□□ -0.67
VTA1-205ENST00000620996 CYP2C8P10632 490 aa10.87□□□□□ -0.67
VTA1-205ENST00000620996 PLS3P13797 630 aa10.87□□□□□ -0.67
VTA1-205ENST00000620996 SLC9A1P19634 815 aa10.87□□□□□ -0.67
VTA1-205ENST00000620996 NAP1L1P55209 391 aaKnown RBP10.87□□□□□ -0.67
VTA1-205ENST00000620996 KRT83P78385 493 aa10.87□□□□□ -0.67
VTA1-205ENST00000620996 MAPK7Q13164 816 aa10.87□□□□□ -0.67
VTA1-205ENST00000620996 EXOC3L4Q17RC7 722 aa10.87□□□□□ -0.67
VTA1-205ENST00000620996 SFMBT2Q5VUG0 894 aa10.87□□□□□ -0.67
VTA1-205ENST00000620996 ANO5Q75V66 913 aa10.87□□□□□ -0.67
VTA1-205ENST00000620996 FRMD5Q7Z6J6 570 aa10.87□□□□□ -0.67
VTA1-205ENST00000620996 RIOX2Q8IUF8 465 aa10.87□□□□□ -0.67
VTA1-205ENST00000620996 CCDC60Q8IWA6 550 aaPredicted RBP10.87□□□□□ -0.67
VTA1-205ENST00000620996 JAKMIP2Q96AA8 810 aa10.87□□□□□ -0.67
VTA1-205ENST00000620996 AGTPBP1Q9UPW5 1226 aa10.87□□□□□ -0.67
VTA1-205ENST00000620996 PFASO15067 1338 aa10.87□□□□□ -0.67
VTA1-205ENST00000620996 ZMYM2Q9UBW7 1377 aa10.87□□□□□ -0.67
VTA1-205ENST00000620996 CXCL11O14625 94 aa10.87□□□□□ -0.67
VTA1-205ENST00000620996 EIF3JO75822 258 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms