RNA–Protein interactions for RNA: ENST00000617219.1

CFHR3-206, Transcript of complement factor H related 3, humanhuman

TSL 5 BASIC

Gene CFHR3, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-206ENST00000617219 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.69□□□□□ -1.5
CFHR3-206ENST00000617219 KISS1RQ969F8 398 aaPredicted RBP5.69□□□□□ -1.5
CFHR3-206ENST00000617219 ALG1Q9BT22 464 aa5.69□□□□□ -1.5
CFHR3-206ENST00000617219 MTA3Q9BTC8 594 aa5.69□□□□□ -1.5
CFHR3-206ENST00000617219 CLDND1Q9NY35 253 aa5.69□□□□□ -1.5
CFHR3-206ENST00000617219 NUDCQ9Y266 331 aa5.69□□□□□ -1.5
CFHR3-206ENST00000617219 ZBTB1Q9Y2K1 713 aa5.69□□□□□ -1.5
CFHR3-206ENST00000617219 CEMIPQ8WUJ3 1361 aa5.68□□□□□ -1.5
CFHR3-206ENST00000617219 SOS1Q07889 1333 aaPredicted RBP5.68□□□□□ -1.5
CFHR3-206ENST00000617219 USP42Q9H9J4 1324 aaKnown RBP5.68□□□□□ -1.5
CFHR3-206ENST00000617219 C22orf46C9J442 243 aa5.68□□□□□ -1.5
CFHR3-206ENST00000617219 EFCAB14O75071 495 aa5.68□□□□□ -1.5
CFHR3-206ENST00000617219 DBHP09172 617 aa5.68□□□□□ -1.5
CFHR3-206ENST00000617219 CYP19A1P11511 503 aaPredicted RBP5.68□□□□□ -1.5
CFHR3-206ENST00000617219 HMGB2P26583 209 aaKnown RBP5.68□□□□□ -1.5
CFHR3-206ENST00000617219 DDR1Q08345 913 aa5.68□□□□□ -1.5
CFHR3-206ENST00000617219 TEFQ10587 303 aa5.68□□□□□ -1.5
CFHR3-206ENST00000617219 KIZQ2M2Z5 673 aa5.68□□□□□ -1.5
CFHR3-206ENST00000617219 MROH9Q5TGP6 573 aa5.68□□□□□ -1.5
CFHR3-206ENST00000617219 WWC2Q6AWC2 1192 aa5.68□□□□□ -1.5
CFHR3-206ENST00000617219 KCNT2Q6UVM3 1135 aa5.68□□□□□ -1.5
CFHR3-206ENST00000617219 HOMER1Q86YM7 354 aa5.68□□□□□ -1.5
CFHR3-206ENST00000617219 DCP2Q8IU60 420 aaKnown RBP5.68□□□□□ -1.5
CFHR3-206ENST00000617219 TEX2Q8IWB9 1127 aa5.68□□□□□ -1.5
CFHR3-206ENST00000617219 TTC5Q8N0Z6 440 aa5.68□□□□□ -1.5
CFHR3-206ENST00000617219 DPF3Q92784 378 aa5.68□□□□□ -1.5
CFHR3-206ENST00000617219 ZNF496Q96IT1 587 aaPredicted RBP5.68□□□□□ -1.5
CFHR3-206ENST00000617219 ZNF552Q9H707 407 aaPredicted RBP5.68□□□□□ -1.5
CFHR3-206ENST00000617219 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.68□□□□□ -1.5
CFHR3-206ENST00000617219 CD2APQ9Y5K6 639 aa5.68□□□□□ -1.5
CFHR3-206ENST00000617219 C10orf71Q711Q0 1435 aa5.68□□□□□ -1.5
CFHR3-206ENST00000617219 UBR2Q8IWV8 1755 aa5.68□□□□□ -1.5
CFHR3-206ENST00000617219 PXDNLA1KZ92 1463 aa5.67□□□□□ -1.5
CFHR3-206ENST00000617219 PRAMEF22A3QJZ6 481 aa5.67□□□□□ -1.5
CFHR3-206ENST00000617219 F8W031 263 aaPredicted RBP5.67□□□□□ -1.5
CFHR3-206ENST00000617219 ARNTLO00327 626 aa5.67□□□□□ -1.5
CFHR3-206ENST00000617219 PEX10O60683 326 aa5.67□□□□□ -1.5
CFHR3-206ENST00000617219 PPP1R11O60927 126 aaPredicted RBP5.67□□□□□ -1.5
CFHR3-206ENST00000617219 IGSF3O75054 1194 aa5.67□□□□□ -1.5
CFHR3-206ENST00000617219 FARP2O94887 1054 aaPredicted RBP5.67□□□□□ -1.5
CFHR3-206ENST00000617219 GLI4P10075 376 aa5.67□□□□□ -1.5
CFHR3-206ENST00000617219 SDHBP21912 280 aa5.67□□□□□ -1.5
CFHR3-206ENST00000617219 CANXP27824 592 aaKnown RBP5.67□□□□□ -1.5
CFHR3-206ENST00000617219 ZNF790Q6PG37 636 aa5.67□□□□□ -1.5
CFHR3-206ENST00000617219 ZC3H14Q6PJT7 736 aaKnown RBP5.67□□□□□ -1.5
CFHR3-206ENST00000617219 LBX2Q6XYB7 198 aa5.67□□□□□ -1.5
CFHR3-206ENST00000617219 MTDHQ86UE4 582 aaKnown RBP5.67□□□□□ -1.5
CFHR3-206ENST00000617219 SYNPOQ8N3V7 929 aa5.67□□□□□ -1.5
CFHR3-206ENST00000617219 PLEKHO2Q8TD55 490 aa5.67□□□□□ -1.5
CFHR3-206ENST00000617219 APPBP2Q92624 585 aa5.67□□□□□ -1.5
CFHR3-206ENST00000617219 PEX11GQ96HA9 241 aa5.67□□□□□ -1.5
CFHR3-206ENST00000617219 RNPC3Q96LT9 517 aaKnown RBP5.67□□□□□ -1.5
CFHR3-206ENST00000617219 SLC38A3Q99624 504 aa5.67□□□□□ -1.5
CFHR3-206ENST00000617219 MRPL4Q9BYD3 311 aaKnown RBP5.67□□□□□ -1.5
CFHR3-206ENST00000617219 AP5M1Q9H0R1 490 aa5.67□□□□□ -1.5
CFHR3-206ENST00000617219 TMEM260Q9NX78 707 aa5.67□□□□□ -1.5
CFHR3-206ENST00000617219 SIRT5Q9NXA8 310 aa5.67□□□□□ -1.5
CFHR3-206ENST00000617219 SFMBT1Q9UHJ3 866 aa5.67□□□□□ -1.5
CFHR3-206ENST00000617219 TMA7Q9Y2S6 64 aaKnown RBP5.67□□□□□ -1.5
CFHR3-206ENST00000617219 COL15A1P39059 1388 aa5.67□□□□□ -1.5
CFHR3-206ENST00000617219 HEG1Q9ULI3 1381 aa5.67□□□□□ -1.5
CFHR3-206ENST00000617219 MYH14Q7Z406 1995 aaKnown RBP5.66□□□□□ -1.5
CFHR3-206ENST00000617219 SIPA1L3O60292 1781 aaPredicted RBP5.66□□□□□ -1.5
CFHR3-206ENST00000617219 A0A0G2JLW4 131 aa5.66□□□□□ -1.5
CFHR3-206ENST00000617219 NTRK1P04629 796 aa5.66□□□□□ -1.5
CFHR3-206ENST00000617219 FPR2P25090 351 aa5.66□□□□□ -1.5
CFHR3-206ENST00000617219 PIP4K2AP48426 406 aaPredicted RBP5.66□□□□□ -1.5
CFHR3-206ENST00000617219 MAPKAPK2P49137 400 aa5.66□□□□□ -1.5
CFHR3-206ENST00000617219 YBX1P67809 324 aaKnown RBP5.66□□□□□ -1.5
CFHR3-206ENST00000617219 CBX2Q14781 532 aaPredicted RBP5.66□□□□□ -1.5
CFHR3-206ENST00000617219 RPTNQ6XPR3 784 aa5.66□□□□□ -1.5
CFHR3-206ENST00000617219 RIOX2Q8IUF8 465 aa5.66□□□□□ -1.5
CFHR3-206ENST00000617219 Q8N1Y9 231 aa5.66□□□□□ -1.5
CFHR3-206ENST00000617219 NLGN1Q8N2Q7 840 aa5.66□□□□□ -1.5
CFHR3-206ENST00000617219 RTF1Q92541 710 aaKnown RBP5.66□□□□□ -1.5
CFHR3-206ENST00000617219 FAM84AQ96KN4 292 aa5.66□□□□□ -1.5
CFHR3-206ENST00000617219 PLEKHF1Q96S99 279 aa5.66□□□□□ -1.5
CFHR3-206ENST00000617219 THUMPD2Q9BTF0 503 aaKnown RBP5.66□□□□□ -1.5
CFHR3-206ENST00000617219 EPB41L1Q9H4G0 881 aa5.66□□□□□ -1.5
CFHR3-206ENST00000617219 MIS18AQ9NYP9 233 aa5.66□□□□□ -1.5
CFHR3-206ENST00000617219 NDOR1Q9UHB4 597 aa5.66□□□□□ -1.5
CFHR3-206ENST00000617219 TRAF6Q9Y4K3 522 aa5.66□□□□□ -1.5
CFHR3-206ENST00000617219 X6R8D5 127 aa5.66□□□□□ -1.5
CFHR3-206ENST00000617219 VIRMAQ69YN4 1812 aaKnown RBP5.66□□□□□ -1.5
CFHR3-206ENST00000617219 KIAA1551Q9HCM1 1747 aa5.65□□□□□ -1.5
CFHR3-206ENST00000617219 ESYT3A0FGR9 886 aa5.65□□□□□ -1.5
CFHR3-206ENST00000617219 ZC3H12DA2A288 527 aaKnown RBP5.65□□□□□ -1.5
CFHR3-206ENST00000617219 FAM47E-STBD1D6RA91 191 aa5.65□□□□□ -1.5
CFHR3-206ENST00000617219 PLD2O14939 933 aa5.65□□□□□ -1.5
CFHR3-206ENST00000617219 MSCO60682 206 aa5.65□□□□□ -1.5
CFHR3-206ENST00000617219 DGKIO75912 1065 aa5.65□□□□□ -1.5
CFHR3-206ENST00000617219 A1BGP04217 495 aa5.65□□□□□ -1.5
CFHR3-206ENST00000617219 C6orf222P0C671 652 aaPredicted RBP5.65□□□□□ -1.5
CFHR3-206ENST00000617219 DPEP1P16444 411 aa5.65□□□□□ -1.5
CFHR3-206ENST00000617219 SRSF3P84103 164 aaKnown RBP5.65□□□□□ -1.5
CFHR3-206ENST00000617219 SQSTM1Q13501 440 aa5.65□□□□□ -1.5
CFHR3-206ENST00000617219 SLC9A5Q14940 896 aa5.65□□□□□ -1.5
CFHR3-206ENST00000617219 TCEA2Q15560 299 aa5.65□□□□□ -1.5
CFHR3-206ENST00000617219 DBX2Q6ZNG2 339 aa5.65□□□□□ -1.5
CFHR3-206ENST00000617219 NLRP10Q86W26 655 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms